Aequ009632.1
Basic Information
- Insect
- Ametastegia equiseti
- Gene Symbol
- wek_2
- Assembly
- GCA_963989295.1
- Location
- OZ022392.1:21475357-21478972[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 8.5 1e+03 1.3 0.1 2 23 425 447 424 447 0.89 2 13 0.0024 0.29 12.4 1.1 2 23 452 474 451 474 0.91 3 13 0.3 36 5.8 2.6 5 23 538 556 534 556 0.91 4 13 0.058 6.8 8.1 1.0 2 23 562 584 561 584 0.96 5 13 0.0088 1 10.6 0.8 3 23 601 621 600 621 0.99 6 13 2.8e-05 0.0033 18.5 1.0 1 23 634 656 634 656 0.98 7 13 8.6e-05 0.01 17.0 2.4 1 23 664 686 664 686 0.98 8 13 1.1e-06 0.00013 22.9 0.5 1 23 692 714 692 714 0.98 9 13 0.0023 0.27 12.5 1.6 2 23 718 740 717 740 0.94 10 13 0.00017 0.02 16.0 0.3 1 23 768 790 768 790 0.98 11 13 0.00062 0.073 14.3 0.2 1 23 796 818 796 818 0.97 12 13 1.4e-05 0.0016 19.5 0.8 1 23 823 845 823 845 0.99 13 13 0.0075 0.88 10.9 1.8 1 23 853 876 853 877 0.94
Sequence Information
- Coding Sequence
- atGTCCGGTTGCGCAGCGGTCGGATGTTCGAACCGTGGTGATAGGGGTTATTTTATGAAAAGTTTCCCTCGTGATCCAGAGCGTAGAGCTCTATGGGCTTCGCAAATGAATAGAGATTGTTGGCAGCCAAATAATAACAGCCGTTTATGCGAGGTACACTTCGACGATGATCAATGGGAGAAAACGAGGCAGGACGGTACTCGCAAGTTAAAATGCAACGCCGTTCCCACCTTGTTTCAATTCCCTAAGCAAACGTTGAAAAAGCAGAAAGAGCGTAAGCCCAAATTCTTCGTTTCGCCAACTTCAGGGGTTTGCGATGAACAATGTTTGCAGaattttaatcCTCCAAAGGCTGCAATCGAAAAGGAAAACTTAAACTCGTCAAGCGTGGAATCAAAAATTACTTCAGAACCGCAACAAGAGTCGATCAGTTACGTAGACAAAAAAAGCCTGAAGAGCGTTCCACTGCACGGTTCGATATCTGAAGACTGCAGAACCAGGGATCATGCAAAACCCCAGAGTCAGCTTTCCAACAAGAAAGACAAATTGTCAAGCTCCACTTTTCAAACTAAGACACTCAAGTGCTCAGCGCTGAGTTGCAGCGAGTCTGATTTGACCTATTACAAGTTTCCATTGGGCAATCCCAATCTCTTGACAAAATGGCTTAGAATATGTGCCAAAGACTTTGAGCCCGATGCCCAAAGCTTTATATGCGGAGAGCACTTTACTTCGGATTGTTTCGAGACTGGGAGTGATACCTTGATCAAGGATAACGCAATTCCCACTATTTGCAAGGAGCTTATCGATTACGACGGAGTGAAAGACTTTGATCATGGAGAGGAAAGGATGGAGAAAACCAGAGCTCACAGAAGTTCTGATCTTCCCAGAAATTGGGAATCATTCAATCATCAAGATCAAGACAAAATCGATACCGTGATCAAGCCGGGAGACACTGACGCCTACTGCAGACTTTGTGCAAGAAGGAATGGCAGGAACAATGTTCCAATATTTGGCGAATCAGATTTGGCAGAGAAAATAAGCAGATGTTTACCGATAATAATTCAAACTACAGACAATTTGCCTCTAGAAATTTGCCAAGAATGCTTATACAATTTGAACATTTGCTATAAAATGATCATCGGATCGCTCAAGGCGGATTTCTTCCTCAGATCAGAATTATCAGAGACTGTTAAGCCCCACAGATCCGAAGAGCCAGACAAGAGCGATTCCTCGGTGAAGGAAGAACCTGTCTTCAGAATCAACGGTCCTATCAAATGTGACTTATGTGACGATTACTTTGAAGATATGAACGCGTTTGACGAGCACATAGAAAACTTGCATCTTCTTCAATGGCGTTGTAGTTTGTGCGATCACAGCTTTGAAACGTCCCAAGAACTGCTTGCGCACAAAACCCTGAGTCACTCGGGTCAAATTGTGACCTGTGAAGGCTGCGAGAGTTCAGATTTTATTGAGGAGATCGATTGCGGAGTTCGAGAGGATAAAATCGAGGGGAATGAACGGCTTGGGATGGACACCGATGAGCAGCGATTGCTCGATGACAGCAAAGAACCTGGAGAAATAGAGGGAAAGTCATCAAATCTGAATtgtataaaatgtaaaattgccTTCAAGGACGTCAAACAATTTCGCAAACATCATACCATCCATTTACCCAGATGTATAAAATGTTCTGTATGTTTCAAACGGTGTCCATCTATTTTTGACTATCTATCTCACATCAAAGTAGCTCATAATCAAAAGAAGAGGAGCCAATTGAGCAAAGAAAATACTGTGCACGGATGCAAGTATTGTAAAAAAGTATTCTTGATCAAACAACAACTGGTCATTCACTTGAGGAAACACAAGAAGGAAATGCTGGACGATCCTTCGGTAACTGTTTACAAATGTGTTACTTGTCCAAAGAAGTTTGTGGACCGAGCGCTGTATCAGAAACATCGAAACGTCCACGATCCGGCCTGCTGGCACAAATTCAGATGTTACATATGCAACAGATCGTTCATGGACAAATTCAAGCTTAAAATTCACCAGTCTATCCACGACGGAGTTAAACCGTATCAATGCGACGTCTGCGGTCGAATGTTCAACAGAAATGCTAACATGaTAAGACACAGAGCGAAACACTTCGAGCAGACTTGTCGCCACTGCGAAGAAACCTTTGCGAATACGCAGTCTCTCAGGGAACATCTTAAAGACATACACGGCGATACTTTGAACCCAAAGAGTATTCCCAAAGCAGGAAAAGCGGAGAGAAATAAAAGCAACGGTAGCACAGGGGATAGTTTTGTCTGCGGATATTGCGGAAAGCAACTGACATCTTATTACTCTTTACTAGATCACGAGCGAATACACACCGGAGACAAACCCTACGTTTGTCAAAATTGCGGCAAAGCGTTCAGAAGTATTACCGCCAGATGGGACCACATGGTGAGGCACGAGAAAGGAAACTACGTCTGCGAGTTGTGCGGAAAGATCATGAGTAACAAGCTCAACCTTAAACGACATCTGAGAAAACATGCGGCTATCGAACAACGAAAATTCGAATGTAAGGAATGTGGAAAACTGTTTCACGTCAGATGGAGACTAAACGCACATCTAGTCAGGATTCATCATTCGGTGCCTGGCgattaa
- Protein Sequence
- MSGCAAVGCSNRGDRGYFMKSFPRDPERRALWASQMNRDCWQPNNNSRLCEVHFDDDQWEKTRQDGTRKLKCNAVPTLFQFPKQTLKKQKERKPKFFVSPTSGVCDEQCLQNFNPPKAAIEKENLNSSSVESKITSEPQQESISYVDKKSLKSVPLHGSISEDCRTRDHAKPQSQLSNKKDKLSSSTFQTKTLKCSALSCSESDLTYYKFPLGNPNLLTKWLRICAKDFEPDAQSFICGEHFTSDCFETGSDTLIKDNAIPTICKELIDYDGVKDFDHGEERMEKTRAHRSSDLPRNWESFNHQDQDKIDTVIKPGDTDAYCRLCARRNGRNNVPIFGESDLAEKISRCLPIIIQTTDNLPLEICQECLYNLNICYKMIIGSLKADFFLRSELSETVKPHRSEEPDKSDSSVKEEPVFRINGPIKCDLCDDYFEDMNAFDEHIENLHLLQWRCSLCDHSFETSQELLAHKTLSHSGQIVTCEGCESSDFIEEIDCGVREDKIEGNERLGMDTDEQRLLDDSKEPGEIEGKSSNLNCIKCKIAFKDVKQFRKHHTIHLPRCIKCSVCFKRCPSIFDYLSHIKVAHNQKKRSQLSKENTVHGCKYCKKVFLIKQQLVIHLRKHKKEMLDDPSVTVYKCVTCPKKFVDRALYQKHRNVHDPACWHKFRCYICNRSFMDKFKLKIHQSIHDGVKPYQCDVCGRMFNRNANMIRHRAKHFEQTCRHCEETFANTQSLREHLKDIHGDTLNPKSIPKAGKAERNKSNGSTGDSFVCGYCGKQLTSYYSLLDHERIHTGDKPYVCQNCGKAFRSITARWDHMVRHEKGNYVCELCGKIMSNKLNLKRHLRKHAAIEQRKFECKECGKLFHVRWRLNAHLVRIHHSVPGD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00060263;
- 90% Identity
- iTF_00060263;
- 80% Identity
- iTF_00060263;