Basic Information

Insect: Ametastegia equiseti
Gene Symbol: -
Assembly: GCA_963989295.1
Location: OZ022395.1:6240899-6244357[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 3 3.6e+02 2.7 2.0 2 12 415 425 414 436 0.77

2 18 0.005 0.59 11.4 1.5 1 19 442 460 442 464 0.83

3 18 0.012 1.4 10.2 1.4 1 23 477 499 477 499 0.91

4 18 0.022 2.6 9.4 1.6 2 23 507 529 506 529 0.96

5 18 3.9e-06 0.00046 21.2 1.6 1 23 535 557 535 557 0.98

6 18 0.005 0.59 11.4 1.9 1 23 563 585 563 585 0.97

7 18 6.7e-07 7.9e-05 23.6 2.0 1 23 591 613 591 613 0.99

8 18 8.9 1.1e+03 1.2 0.8 3 19 623 642 622 644 0.77

9 18 0.33 39 5.7 4.8 1 20 667 686 667 689 0.92

10 18 0.01 1.2 10.4 0.2 1 23 695 717 695 717 0.93

11 18 0.029 3.4 9.0 3.8 1 22 736 757 736 757 0.95

12 18 0.0049 0.58 11.4 0.1 2 21 765 784 764 785 0.93

13 18 0.026 3.1 9.1 0.8 3 23 794 814 793 814 0.98

14 18 8.9e-06 0.001 20.1 4.8 1 23 824 846 824 846 0.98

15 18 0.0047 0.56 11.5 1.3 1 23 852 874 852 874 0.98

16 18 0.00029 0.034 15.3 1.3 1 23 880 902 880 902 0.98

17 18 0.00016 0.019 16.1 0.3 1 23 908 930 908 930 0.98

18 18 2.1e-06 0.00025 22.1 1.7 1 23 936 959 936 959 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	3	3.6e+02	2.7	2.0	2	12	415	425	414	436	0.77
2	18	0.005	0.59	11.4	1.5	1	19	442	460	442	464	0.83
3	18	0.012	1.4	10.2	1.4	1	23	477	499	477	499	0.91
4	18	0.022	2.6	9.4	1.6	2	23	507	529	506	529	0.96
5	18	3.9e-06	0.00046	21.2	1.6	1	23	535	557	535	557	0.98
6	18	0.005	0.59	11.4	1.9	1	23	563	585	563	585	0.97
7	18	6.7e-07	7.9e-05	23.6	2.0	1	23	591	613	591	613	0.99
8	18	8.9	1.1e+03	1.2	0.8	3	19	623	642	622	644	0.77
9	18	0.33	39	5.7	4.8	1	20	667	686	667	689	0.92
10	18	0.01	1.2	10.4	0.2	1	23	695	717	695	717	0.93
11	18	0.029	3.4	9.0	3.8	1	22	736	757	736	757	0.95
12	18	0.0049	0.58	11.4	0.1	2	21	765	784	764	785	0.93
13	18	0.026	3.1	9.1	0.8	3	23	794	814	793	814	0.98
14	18	8.9e-06	0.001	20.1	4.8	1	23	824	846	824	846	0.98
15	18	0.0047	0.56	11.5	1.3	1	23	852	874	852	874	0.98
16	18	0.00029	0.034	15.3	1.3	1	23	880	902	880	902	0.98
17	18	0.00016	0.019	16.1	0.3	1	23	908	930	908	930	0.98
18	18	2.1e-06	0.00025	22.1	1.7	1	23	936	959	936	959	0.98

Sequence Information

Coding Sequence: ATGAAGATACTTATAAAAGATTCCACAGGGGATTTAATCCCGATACCAATAAAAGAGGCAGAGACTTTCCGAGAGTTGAATgaaagaatggaaaaagaTCACGGAATGCAAATGGATTTCACTAATTTACACGACGATAAGCGTATAGACTTGGATCAGAATATTTTGTCCTATCTAACCGAAAACAATTGCGAGGAGGCCGCAGCGGTCTCTTCGGTAAATTATTACgtagaagacgaagaagaagttgAGAAATGCCTCGacgaaatagagaaaaaggaagaacaAAGCAGAGAAACTGATTCAATTTCACTCGAAGAAGTTGTGCAAATAATTCCCGAGGGATATCGTCTAGTAACTTTGGACCCTGAGCTAGAAGACGAACTTTGTGTGGAAATCGAGGGAATGGAATCTGAGGATAGATCCGATATTGCTGATAGAGAAATGGAAAACACTGAGCTCAAAATAACTTTGGTATCTGAGAGTTTTCAAGCTCAGGAATCAGAgcagatttttgaactttctgatgCAGTATTTGAACTAAGTAACGATACGTCCTTTTCGGAGATTTGTAGACTTTGCGCAACTCGAGGAAATGAGATGATACGTATATTTGGACCTGACGATACTCACAGAGATATtatgcaaaaaattcaactctGCTTACCCGTCGTGATAAGGAAGTCTGATAATCTACCAAAAGAAGCCTGCCATTCGTGTCTGGAGAAGCTAGAACTGTgttacaaatttcgaaaaacagtAGCAGAGGCTGAAAAGCAGCTTCTGATGTTGGAGGAAAGAATACTTGACGACGttaaaagactggaaaaatattctcaaacttGGGAGCCGTTCGGTAAACAAAATCGAGCAGAAAAACTTGATGGAAGCcaagagaaattgaaaatacgtTACAAAAAAGATAATAATTGTGATAATGCATCGACAATTATTGCTACAAACTTTCAAAACACGaataaaactgaagaaaatgaagtcgattcaaaaaatttgaggcTTTGCTCAGAAAAACTAGttcgtaataaaataaaagatagaAATAATACAGAAAAAGATGATGTAGCTCTAAATTATGCTGCAGAATTACAATCTGAGAAATTGGGTAACAGCGAGAtagaaaaatgtggaaaaaataaCGACGTAGATGATATTCCGTTCGATGGATTTGACGGAGTTGAAGATAAGGCTTTTTCTGATCAGAGTGTCGACAACAGAATGATAAAATGTCGAATTTGCGGGGAAGTTTTCCAAAGCGTTAAAAAATGCCATATACATTCTAGCGTTCATGCTTCTAAGAAATACTACCCATGCAGTATCTGCGACAAAACTTTCAGTAATGAAAAGGACTGTAACGAACATAACGCAGAACACACAGAGAGTAAAAGGTTTGAAAGAAGAGCGGCGACTCACATTTGTCAAGAATGTGGTAAGAAATTTGTAACCGAAGCTAGACTAACGTTTCATCAAATCTACCACAATCCTGATAGCGAACCATGCTATTGTACAAAATGCGATAAACTCATGGCTTCCGAGTCTTCTCTCTATCAACATATGCTCACTGTCCATACACAGTATAAAGAATACTGCTGCGATATTTGTGGAAAACAGTTCAgAGCCCAAGCCCAGCTCAGTGCTCATCAAAGGAAACACAAAGACGAACGACCTTTTGAATGCACAATTTGCAAGAAGAGATTTTATGCCAACGACATACTGAGACGTCACAAAAAGCTGCACCTACCAGACAAGCCTTATCAATGCGATCAGTGCGGAAAACGATTCGACAGAAACAACACTTTGACCAAACATTTATTGAGACACCAAGTGGAGGCTGGTCAATCGATGATTTGTCACGTTTGCATTATTTGCAAAGAAGTATTTGCAGACGCTGTTACTTGTAAGATACATCTGGAGGATTGTGCGACTGTTACAGAAGAAAGTTGCGAGAATAAAATACTGGAGTTGAAACTGCAGGAAACTTACAGATGTGAATATTGCGGAAGATGTTACATGGAAATTGAATCCATGAAAAATCACAGATCGTGTCACAGCGAACCGTCGCCTTACATATGCACAATCTGCGACACGTCGTATGCGACTTACAATCAAGCGACGGCGCACAAAACGGCGCATAAAAAATCCTCAAAATTAACAAGCATTAAAGACGAGCTAGTAATCCCTAAGTATTTCACCTGCGAACATTGCGACAAGCGTTTCCTTCACTTCACCAACATGAATATTCACAGGCGATCTTGCTCCAGTGGAAAAATTTGGACTTGCAGATACTGCGGAGCTGTGTTTGAGAACGCCAGAGAACTCTCAAGCCACAAAAAGGGAGAAACTAACGACAAAAATTGGCTCTGTAACGAATGCGATAACAAATTTGGATCCGAATGCGCTCTCGAAATACACAGAGAAACTCATTCCACGTTAataaaaaagacagaaaactTTTCCTGCTCACATTGCGCAAAGACATTCACCCAgAAAGCGCATCTGACTATTCATGTGCGGAGTCACACCGGCGAGCGACCCTACAGCTGTGATTTGTGCGACAAAGCGTATAAGATAAAAACTGAACGAGATAATCACCGTAGAACTCACTCTGGTGAAAGACCATTCAAGTGTACGATATGCGCAAAGTCGTTTGCGAATACAGCGAGACTTAGAGAACACACGAGATTCCATTCAGGAAAGAGGCCCTACAGTTGTTCCGTATGTGGTCAATCTTTTAAGAAAGCAAATGCCAGGAATGTTCACATGACTATACACACCGGGGAAAAACCCTATCAGTGCGATGTATGCGGTACTAGTTTCAGACGAACCGGAGACATGAGAAAACACAAGAGAACTCAACACGGACAGAAGTTGTTTAATGTCACAAATGAAACTGGATTCATTGTAGATTATAAAATCTCTGATGCCTCGTGA
Protein Sequence: MKILIKDSTGDLIPIPIKEAETFRELNERMEKDHGMQMDFTNLHDDKRIDLDQNILSYLTENNCEEAAAVSSVNYYVEDEEEVEKCLDEIEKKEEQSRETDSISLEEVVQIIPEGYRLVTLDPELEDELCVEIEGMESEDRSDIADREMENTELKITLVSESFQAQESEQIFELSDAVFELSNDTSFSEICRLCATRGNEMIRIFGPDDTHRDIMQKIQLCLPVVIRKSDNLPKEACHSCLEKLELCYKFRKTVAEAEKQLLMLEERILDDVKRLEKYSQTWEPFGKQNRAEKLDGSQEKLKIRYKKDNNCDNASTIIATNFQNTNKTEENEVDSKNLRLCSEKLVRNKIKDRNNTEKDDVALNYAAELQSEKLGNSEIEKCGKNNDVDDIPFDGFDGVEDKAFSDQSVDNRMIKCRICGEVFQSVKKCHIHSSVHASKKYYPCSICDKTFSNEKDCNEHNAEHTESKRFERRAATHICQECGKKFVTEARLTFHQIYHNPDSEPCYCTKCDKLMASESSLYQHMLTVHTQYKEYCCDICGKQFRAQAQLSAHQRKHKDERPFECTICKKRFYANDILRRHKKLHLPDKPYQCDQCGKRFDRNNTLTKHLLRHQVEAGQSMICHVCIICKEVFADAVTCKIHLEDCATVTEESCENKILELKLQETYRCEYCGRCYMEIESMKNHRSCHSEPSPYICTICDTSYATYNQATAHKTAHKKSSKLTSIKDELVIPKYFTCEHCDKRFLHFTNMNIHRRSCSSGKIWTCRYCGAVFENARELSSHKKGETNDKNWLCNECDNKFGSECALEIHRETHSTLIKKTENFSCSHCAKTFTQKAHLTIHVRSHTGERPYSCDLCDKAYKIKTERDNHRRTHSGERPFKCTICAKSFANTARLREHTRFHSGKRPYSCSVCGQSFKKANARNVHMTIHTGEKPYQCDVCGTSFRRTGDMRKHKRTQHGQKLFNVTNETGFIVDYKISDAS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -