Basic Information

Insect: Ametastegia equiseti
Gene Symbol: -
Assembly: GCA_963989295.1
Location: OZ022394.1:3796081-3798520[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 5.4e-05 0.0064 17.6 1.9 1 23 298 320 298 320 0.97

2 12 0.00085 0.1 13.8 4.6 1 23 324 346 324 346 0.98

3 12 0.0006 0.07 14.3 3.9 1 23 351 373 351 373 0.96

4 12 0.0012 0.15 13.3 3.3 1 23 425 447 425 447 0.97

5 12 0.00088 0.1 13.8 1.4 1 23 452 474 452 474 0.97

6 12 0.00032 0.038 15.2 2.3 1 23 524 546 524 546 0.98

7 12 0.00047 0.055 14.7 1.5 2 23 554 575 554 575 0.98

8 12 1.1e-06 0.00013 22.9 2.1 1 23 586 608 586 608 0.96

9 12 0.00013 0.015 16.4 1.2 1 23 614 636 614 636 0.97

10 12 0.00018 0.021 16.0 0.7 1 23 642 664 642 664 0.98

11 12 5.3e-06 0.00062 20.8 2.0 1 23 670 692 670 692 0.96

12 12 9.4e-05 0.011 16.8 0.3 1 22 698 719 698 719 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	5.4e-05	0.0064	17.6	1.9	1	23	298	320	298	320	0.97
2	12	0.00085	0.1	13.8	4.6	1	23	324	346	324	346	0.98
3	12	0.0006	0.07	14.3	3.9	1	23	351	373	351	373	0.96
4	12	0.0012	0.15	13.3	3.3	1	23	425	447	425	447	0.97
5	12	0.00088	0.1	13.8	1.4	1	23	452	474	452	474	0.97
6	12	0.00032	0.038	15.2	2.3	1	23	524	546	524	546	0.98
7	12	0.00047	0.055	14.7	1.5	2	23	554	575	554	575	0.98
8	12	1.1e-06	0.00013	22.9	2.1	1	23	586	608	586	608	0.96
9	12	0.00013	0.015	16.4	1.2	1	23	614	636	614	636	0.97
10	12	0.00018	0.021	16.0	0.7	1	23	642	664	642	664	0.98
11	12	5.3e-06	0.00062	20.8	2.0	1	23	670	692	670	692	0.96
12	12	9.4e-05	0.011	16.8	0.3	1	22	698	719	698	719	0.96

Sequence Information

Coding Sequence: ATGACGATGAATTCAAACTACTTTGGTCTGCCGCTTAATTTAGATAGAGCATGTAGAGTATGTCTTTCGGAGAGTACCAATTTGTCTCCGATATTCTGCACCGATCCAGAAGCTGATGATTTAGCTGGGCTATATCAGAAGATACAAGTTTGTGGATCAATTGAAATCCAGGAACAGGATGGCCTACCTTCTCTGATATGCGACGTTTGTATTTACAAGGCTACCGTCGCTCACGAATTCAGACAACAGTGTCAAAACTCTGACGCTCGGTTGAGATTGTATTTCAATAAACCCGCCAAGTCCAACTTTACGgACTCAAGCACACAGACTGAACCACaaacgagaataatattaacaaaaaaagtgaCGAGTCCTcaggaaaattattttgttaaaGAAGAAATGCAATCTGCAAATTCGCAGGAGTTTTCCAGTCCAATCGAATCATTCTCACAGTCGCAATCCTGCCTGGTAGAAAGTAAAACGACTGAAGAAACAATggaagagaataaaattttcatttgtgaTATAGGGTTTGAGGGAAGCAAGGACGATGTGAGAACAGAAACGATAGAAGAGAATACTCATCATTCCCCATTTCCTCAAAGAGATTTAGACGAACCTGGAGATTTGGTTACACTGGAAGAAAAAGCGGCAGAATTAGAAGAAGCGGAGAAACAGGAGGAGCCAAAAAGTAATGATATGCTTGAGGAAGAATACCTCGTTGAAGgattattgaatgaaaatacagAGGAGGAAGAAAAGCCTCCTACGAAGCGGAGCTACAACAGAAAGGCGAAATCTTTACCAGCAAAAAGCTACAGCGACGATGAAGTAAACGATGATTATTACGAGCCGAGTAGCGACAGCCAAGATTCCGACGTGATGAAATTCAAGTGCAAAGTGTGTTCTAAAAGATACGCGACGCAGAAAGGACTGAAGAAACATTCCCTTGTTCACGACAAAAAACACAAATGCAATATATGCTTCAAGATGTTttacaagcttgaaaatatgGAGAAACACAAAAAGATCCATGCCTCAAAGCCGCATGCTTGCCAGTTGTGCCACGCGTCTTTTTCAAAGTCTCAAAGTTTGGTTCGCCACTTGAAATCTCACACGGAAAAAGTCAACGACATCATCAAACAGATCAGCAGCGACGATCCAAACGAAGATAAAAGCCctaaaaaagaaactaaaaacgACGAAGATACGGACGATGAAACTACAGCTCTAAATGAACCagacgaatttgaaaatgccCCAGAATTATACAAATGCCAAGAATGTAGCCAGTACTGTTCTTCActaaagaatttgaaaagacACGGTCTCGTTCATGgagacaaaaaatattcctgCACCGTATGCAAGAAATGGTTCTTTAGACCGGACACTTTGAAAAAACACGCGGAAAAACACGGGCACGGTTTACTTGACAATTTGGTCGAAGATAACAAATTGTTTGACTCAGATGACGACTCGTTTCCAAATCCAACGGAGAATCTATCGACTAGTAACAGCGAGAGcgtaaaaaaagaaggaagcGACGAGGACGGAGGAGGAGAATACAAATGTCAACATTGCGACAAGATAATGGCTACGAAAAAAGGGCTGAGACGTCACGTATCGATGCATAAGCCAAAAGCTGAGCCTGCAACGtgtgaaatttgcaaaaaagttTGCGCCAGCCAAGCCAGACTGGCTCTGCATCAAAAAACACATAACAAACCTAAGGAAAAGGTCCCACGGGAATACCTTTGCCATATTTGCAGCAAAGTTTATCCAAGCAACTCATCGCTCACTTATCACATGAGAACTCACACTGGGGTTAAACCACATGTGTGTAAAATATGCAACAGCGGTTTTACAACGACAACAAGCCTGGCTAATCATCTCCGTATACATACAGGCGACAAACCATTCGTATGCCACGTTTGTAGCGCAGCATTTGCTGTTAGCTCCGCTTTCAGACGCCACTTGACTCGGCATACTGGAGAAGCTAATTATTTGTGTAAAACATGCGGCAAAGCTTTCAAAAGACTCAGCACTTTGAAAGAACACACTTATACTCATTCCGGGGAAAAACCCTACGTTTGTAAAACATGCGGAGCGGCTTACAGTCACAGCGGAAGTTTGTTCGCTCATCAAAAACGCTGTAGAGCTCAATATGGAGAGATTGGTTTAGTAGAGGAGCATCATCATGCAGTTGCGCACCATATTCATGTGAATAATGTACAGTCTGCTGTTCGATCCCTTGCCGTAATTGGTCAGATTTTTTAA
Protein Sequence: MTMNSNYFGLPLNLDRACRVCLSESTNLSPIFCTDPEADDLAGLYQKIQVCGSIEIQEQDGLPSLICDVCIYKATVAHEFRQQCQNSDARLRLYFNKPAKSNFTDSSTQTEPQTRIILTKKVTSPQENYFVKEEMQSANSQEFSSPIESFSQSQSCLVESKTTEETMEENKIFICDIGFEGSKDDVRTETIEENTHHSPFPQRDLDEPGDLVTLEEKAAELEEAEKQEEPKSNDMLEEEYLVEGLLNENTEEEEKPPTKRSYNRKAKSLPAKSYSDDEVNDDYYEPSSDSQDSDVMKFKCKVCSKRYATQKGLKKHSLVHDKKHKCNICFKMFYKLENMEKHKKIHASKPHACQLCHASFSKSQSLVRHLKSHTEKVNDIIKQISSDDPNEDKSPKKETKNDEDTDDETTALNEPDEFENAPELYKCQECSQYCSSLKNLKRHGLVHGDKKYSCTVCKKWFFRPDTLKKHAEKHGHGLLDNLVEDNKLFDSDDDSFPNPTENLSTSNSESVKKEGSDEDGGGEYKCQHCDKIMATKKGLRRHVSMHKPKAEPATCEICKKVCASQARLALHQKTHNKPKEKVPREYLCHICSKVYPSNSSLTYHMRTHTGVKPHVCKICNSGFTTTTSLANHLRIHTGDKPFVCHVCSAAFAVSSAFRRHLTRHTGEANYLCKTCGKAFKRLSTLKEHTYTHSGEKPYVCKTCGAAYSHSGSLFAHQKRCRAQYGEIGLVEEHHHAVAHHIHVNNVQSAVRSLAVIGQIF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00718825;
90% Identity: iTF_01413634;
80% Identity: -