Basic Information

Insect: Ametastegia equiseti
Gene Symbol: gtf3a
Assembly: GCA_963989295.1
Location: OZ022390.1:19485548-19490110[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 3.6e-05 0.0043 18.1 0.1 3 23 797 817 795 817 0.97

2 17 0.99 1.2e+02 4.2 1.1 1 19 823 841 823 844 0.91

3 17 0.5 59 5.1 0.9 2 23 850 871 849 871 0.95

4 17 5.2e-05 0.0061 17.7 1.6 3 23 880 901 879 901 0.98

5 17 0.0044 0.51 11.6 2.1 1 23 908 931 908 931 0.95

6 17 0.00011 0.013 16.7 0.7 1 23 937 960 937 960 0.94

7 17 3 3.5e+02 2.7 3.6 2 23 968 988 968 988 0.95

8 17 1.6e-07 1.8e-05 25.6 2.1 2 23 994 1015 993 1015 0.97

9 17 9.6e-07 0.00011 23.1 0.1 1 23 1021 1043 1021 1043 0.99

10 17 0.00071 0.084 14.1 2.1 2 23 1055 1077 1054 1077 0.95

11 17 0.0012 0.14 13.4 1.6 1 23 1083 1106 1083 1106 0.96

12 17 0.019 2.3 9.6 2.7 2 23 1128 1150 1127 1150 0.95

13 17 0.0018 0.21 12.8 0.7 2 23 1157 1179 1156 1179 0.96

14 17 4.3e-05 0.0051 17.9 1.0 2 23 1187 1208 1186 1208 0.96

15 17 0.0014 0.16 13.2 2.3 1 23 1214 1237 1214 1237 0.96

16 17 0.37 43 5.5 3.2 2 23 1244 1265 1243 1265 0.96

17 17 0.012 1.4 10.2 1.8 1 23 1271 1293 1271 1293 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	3.6e-05	0.0043	18.1	0.1	3	23	797	817	795	817	0.97
2	17	0.99	1.2e+02	4.2	1.1	1	19	823	841	823	844	0.91
3	17	0.5	59	5.1	0.9	2	23	850	871	849	871	0.95
4	17	5.2e-05	0.0061	17.7	1.6	3	23	880	901	879	901	0.98
5	17	0.0044	0.51	11.6	2.1	1	23	908	931	908	931	0.95
6	17	0.00011	0.013	16.7	0.7	1	23	937	960	937	960	0.94
7	17	3	3.5e+02	2.7	3.6	2	23	968	988	968	988	0.95
8	17	1.6e-07	1.8e-05	25.6	2.1	2	23	994	1015	993	1015	0.97
9	17	9.6e-07	0.00011	23.1	0.1	1	23	1021	1043	1021	1043	0.99
10	17	0.00071	0.084	14.1	2.1	2	23	1055	1077	1054	1077	0.95
11	17	0.0012	0.14	13.4	1.6	1	23	1083	1106	1083	1106	0.96
12	17	0.019	2.3	9.6	2.7	2	23	1128	1150	1127	1150	0.95
13	17	0.0018	0.21	12.8	0.7	2	23	1157	1179	1156	1179	0.96
14	17	4.3e-05	0.0051	17.9	1.0	2	23	1187	1208	1186	1208	0.96
15	17	0.0014	0.16	13.2	2.3	1	23	1214	1237	1214	1237	0.96
16	17	0.37	43	5.5	3.2	2	23	1244	1265	1243	1265	0.96
17	17	0.012	1.4	10.2	1.8	1	23	1271	1293	1271	1293	0.98

Sequence Information

Coding Sequence: atgagtaGCTCAGAGGGAGGCGTGATATACTTTACCTACGAAGATGATGACCCCTCTGGTAACATTTTACCTGAGGGATCTACCGACCATTTAGAAAATTTAGATCAATCCAAAACAAAGCCCGACCAATCAACTCAGCCCTCCAATGCTACAGACACGGTCAATGATCACGACTACATTGATCTCATTGACGGTAAAGAGATCCAAGGGTTATCCAACATCCAAGATGGAACGATAATCATAATACAAAATGACGAGGAAGAAAACCCGAATGAAGTCGAAGCCGAAAGCAAAGGCGAAGGCGAAGGAGAAAATGACGTGGAGGTTTCTCCGTCGAAACACAACGAGGAGTCATTCTCacaaataacaaatttatCCCAATTAAAAAAAGTCACTCCGAGAGTAAAGCTGCAAAGTTCCGAACAAAACTTAGTCAAGGGCTTAGCGGAgctgagaaaaatgaattctcaGTCTAGGAGTAAACGAGTTATGTTGGATGATGCAAAACagcagttgaaaaaatattgtcgaACTTGCGCCGGGCTGAAGTTACCTTTGGTAGACATATTCGGAGATAAGGGTATCCAGATGCGGTTGAATCAGCAGATGAAACACTTGGAAGAAATTGATCAGCACGATAGCTTATCGACTCAAATGTGCATGGATTGCATATGCGATTTGAAAATGAGCTACAAGTTTTTCATGCAAATAAAGAAGGCAGAGTTAAAACTCAAATCTCTATTCACAACGCTCAGCGAACCCTCAGCCGACGACGTTCTCCCAAAAGAGTCTCAGTCCGATGAAACGAGCCAAAACGTCGCCTGGAACAATCCGAAAGTAAAGATTGAAAAGGACGTGCATACTTAtgcaaagaaaaagacaaatgcTCAAAAGTCTGAGCAAACTGCAAGAGGTTCTTCTTTCTTGGCTTCGCAGGACGATTCTAACGTCTCGAAAGCACCTTCTATCAAACTCAAGGAAGAGCCGATGTCTGTTTCGGATGGAGAATGCATGACGGATATGTTGGAGGACGTAATAGACCCAAATCCCAATGACGACAATGATTCGATTGAGGAATTTGACCCGGAGGACCCAGAGATTCATGGGCATAGCTCTGATTATGGAGAGTCGAATGACGAACTTCAAGAACTTGGCTTGCAGAAGGCTAAGAAACCTCGGATCGAGCAGGATAACAACGATCTAGAAATTTCTACGAGTCCCGCTGTATATCAGTACGACAATACCAAAAAAGCGTATGTTAAATACGAGGCGGGAGAAAGCAAAGAGAATCTGCCAATTGAACTTAGAGATATAATCAAAACAGAAACGTCAGATGAGACAACCGATAATAAGAAGCAACCGAATATTTTAAAGAGAAGACTGTCTATGCCTCCAAAGTCGAAACCAGTTTCAGATTCTTTGGAAACGAGTCATTTGGCGgactcaaataattcaaataacgTTGAGAAATCTTTGCAGAAATTGAGCATGGACCATCCTATAAGCATTGGTACTAAAGGGGAGGACGGGATAATGTACGTTACAGTCAAGGGGTCAAAGCCGAATGAATTACTTCttgtaaaagtgaaaaagatgGATAAACCTGCGGAGAAAAATGAGGATTCTAAAGTTAAACATGCTGCGATAGACATGAAACCAGTCGATaggatgttgaaaaaatatgaagctctgaaaatgaaagaaaaagacctGTTCTCTGACAAGTACAAAAAACCTGATATAAGAGAACAGATAATAGAAGAACAAATTGAGGAGTATAAAAGAAGGAGAGAGCAAGTCTTAGGAGGTAATATGATCGGATTGTCCAGTACGATGAACAGCGAGGATGGATCGTCAAAGCTAACGAAAACGGATGGGAATTCCGGGTATAATAGAAGATACTCTCAGCAAGGAACAGGAGAGAGCGATGCCTCGAAGAAAATAGACGATGGCTCAGAAGTCCTGGATGTATGCGAAGAAGACAGAGTAGACGAAGAGTATAAAGAGGGAGAAGAAGGAACGAGCGATCAATTGACACAAGAAAAACCTCGCGCGAGATCCGAGGAATATTTGGCCCGTTTAGCAAGACTCAAACTGAAATGGGAGGAAGCTAAGCAGAAGCGAGAGTCACTGCAGAAGGAATTGGACGAATCATCCGCGGAAGGAGaccaagaaaaattagaaagaattttAGGGGAGAAAGACAAGAATTTAGAGGAGTTTCAAGAGTATTTGAAACAGCGTAAAATCGTGATAAACAGATTGAAAGACGAGGATATAATTTCGCTGTACGAAGACAGAAACAACGCCGTATTAAAAGAAGGATTTTCAGAATCACTGGAAGATATATTTATGGATGATTCTATCCCCCTCGAGGATTACCTGGACTGCGATTACTGCCAGCAAACATTTCCTACCGCAGACATGCTCGAAGAACACTTAAAGACGCACGATTACAAGATAATGCACTATTGCGAAGACTGTCTGACAGAATTTCCTACtaataaatcaaaaaagaaTCACAACATCACTTGCATGCAAAAATTAATATGTAAATATTGCGACTTGATGTTAGATTCAAAGGGTAAAAAACGTCAACATGAACAGAAACACTGCGATAACATGTATGGCCAACTCTGCGATTACTGCGGTGAAAAGTTTAAGCATCAAGGAACGCTCGATCAACATATTAAAACTCAGCACATGAGCTGGGAGAAGGTTTTTCAATGTCCAAAATGCCCTAAGAAATTTGCATTCAAGCAGAAGTTGAGCTTTCACTTGAAATCTGTACACACAACATTGAGAGCTTATCTTTGCGAAGATTGCGGAGCAGATTTCAAGAATCCGGCCAGCTTGCGACATCACCGAATTCGCAAACATCAACCAGTTGGTAACAAAAGGGAATGTATGGTCTGCCACAAAATGGTACCATTCTACAGTTTGTCTAAGCACATGCACACGCACAAAGCTTACACAATACAATGTCCTCACTGCGATAAAATGTTCAAGAACAGTTCGACGCTTAAACAACACGTGAGAATTCACGAGGACCAAAGACAGTACAGATGCGACATTTGCGGAGTTGGATTTAACCGAAGAGACGGTTTACGTCTGCACATGAGAGTACATGAGAAAACTGATAGCAGAGGACTTAAGGAATGTTCATGCCAAGTTTGCGgtgaaaaattcccaaaccaTTCTATGCTCGTGATTCATAGAAACAGAGTTCACAAGGATGGTAGACAGTACACTTGCCACATATGCAACAGATCTATGATATCCCCGAGGTCATTGGAGTGGCACATGTCGCACATACATAACGAGGCGCTTCCTGGCGAGGTAAAACCAGACCCAGACGCCCCgcaggaaaagaaaagagtgACGTGTTACCATTGCGAAAAAACATTCAAGACGGAAATGATTCTAAGAACTCACATTAAAAATACACACGTGGAAAAGGACCCGATGAAATGCGGAGAATGCGATCAACTATTCACATCTGAAGTCAGACTGAGACACCATATGATGGTGGTGCATAATAGACTGGAAGGGACATTGCCTTGTCCGCATTGTCCTAAGAGATTTGTTAATCAGCTCCGATTGAAGACACACATGATATCCCATTCCGAGGAGAGACCTTACACTTGCGAAATATGCggttttaatttgaaaactaaaatCCAATTGATAAAGCACCATCAGAATAGACACAGCGACGAACGACCTTTGCAATGCAGATATTGTCCTTGGAGATGCAAACAAGTCAGCGCTCTTGTTTGTCACGAAAGAACGCATACTAACGAAAGGCCGTACGCTTGCAGCGTTTGTAGGCAAAGGTTCAAGTACCTAGGGGACAAAAACAAACACGAAAGAAGACACGAGGTTCTCGGTGGATCTGGATTCAAGAGAATTGTTACCGGCAGAAATACTAAACAACCAAAAGTACAACCTGATATGACTTCCTGTTCTGAACAAGATCAGGAAGAATATGAGCAAGTTCAAGCTCAATATGATAACGATGATCAATACGAGGAACAGACCGAAGATCAGTACGAAGATGAACAGATTGCCAAATTTGAGGCACAAAGTATAGACGGAGATTACGAACAGACTTATGACCAGGACTACGAGACTTCGAGAGAAGCTTCCGAAGCTGCAGAAGTTATAATGAATATGGAAGACACGACTGTCTATACAGAAGAAGTGACCGCAGACAATCTGGAAACAACTGAGATTATAACTGATGAAATGACTAATCAAATATTGCAATCGGGAACAGTTGTGCATTTGCAACAGCAGGATGATACAGGAAAAATACAAGTTATTCCTGTAATGTTATCTTTGCCAGATTTAACTGATGCTAATTCTGAAGTTAATTTAGCTACAGCTTCAATCATGTACAATACTTAA
Protein Sequence: MSSSEGGVIYFTYEDDDPSGNILPEGSTDHLENLDQSKTKPDQSTQPSNATDTVNDHDYIDLIDGKEIQGLSNIQDGTIIIIQNDEEENPNEVEAESKGEGEGENDVEVSPSKHNEESFSQITNLSQLKKVTPRVKLQSSEQNLVKGLAELRKMNSQSRSKRVMLDDAKQQLKKYCRTCAGLKLPLVDIFGDKGIQMRLNQQMKHLEEIDQHDSLSTQMCMDCICDLKMSYKFFMQIKKAELKLKSLFTTLSEPSADDVLPKESQSDETSQNVAWNNPKVKIEKDVHTYAKKKTNAQKSEQTARGSSFLASQDDSNVSKAPSIKLKEEPMSVSDGECMTDMLEDVIDPNPNDDNDSIEEFDPEDPEIHGHSSDYGESNDELQELGLQKAKKPRIEQDNNDLEISTSPAVYQYDNTKKAYVKYEAGESKENLPIELRDIIKTETSDETTDNKKQPNILKRRLSMPPKSKPVSDSLETSHLADSNNSNNVEKSLQKLSMDHPISIGTKGEDGIMYVTVKGSKPNELLLVKVKKMDKPAEKNEDSKVKHAAIDMKPVDRMLKKYEALKMKEKDLFSDKYKKPDIREQIIEEQIEEYKRRREQVLGGNMIGLSSTMNSEDGSSKLTKTDGNSGYNRRYSQQGTGESDASKKIDDGSEVLDVCEEDRVDEEYKEGEEGTSDQLTQEKPRARSEEYLARLARLKLKWEEAKQKRESLQKELDESSAEGDQEKLERILGEKDKNLEEFQEYLKQRKIVINRLKDEDIISLYEDRNNAVLKEGFSESLEDIFMDDSIPLEDYLDCDYCQQTFPTADMLEEHLKTHDYKIMHYCEDCLTEFPTNKSKKNHNITCMQKLICKYCDLMLDSKGKKRQHEQKHCDNMYGQLCDYCGEKFKHQGTLDQHIKTQHMSWEKVFQCPKCPKKFAFKQKLSFHLKSVHTTLRAYLCEDCGADFKNPASLRHHRIRKHQPVGNKRECMVCHKMVPFYSLSKHMHTHKAYTIQCPHCDKMFKNSSTLKQHVRIHEDQRQYRCDICGVGFNRRDGLRLHMRVHEKTDSRGLKECSCQVCGEKFPNHSMLVIHRNRVHKDGRQYTCHICNRSMISPRSLEWHMSHIHNEALPGEVKPDPDAPQEKKRVTCYHCEKTFKTEMILRTHIKNTHVEKDPMKCGECDQLFTSEVRLRHHMMVVHNRLEGTLPCPHCPKRFVNQLRLKTHMISHSEERPYTCEICGFNLKTKIQLIKHHQNRHSDERPLQCRYCPWRCKQVSALVCHERTHTNERPYACSVCRQRFKYLGDKNKHERRHEVLGGSGFKRIVTGRNTKQPKVQPDMTSCSEQDQEEYEQVQAQYDNDDQYEEQTEDQYEDEQIAKFEAQSIDGDYEQTYDQDYETSREASEAAEVIMNMEDTTVYTEEVTADNLETTEIITDEMTNQILQSGTVVHLQQQDDTGKIQVIPVMLSLPDLTDANSEVNLATASIMYNT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00938951;
90% Identity: -
80% Identity: -