Basic Information

Insect: Ametastegia equiseti
Gene Symbol: ham
Assembly: GCA_963989295.1
Location: OZ022390.1:20739987-20755295[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.045 5.3 8.4 0.0 2 23 179 201 178 201 0.93

2 9 0.089 11 7.5 0.1 1 23 208 231 208 231 0.93

3 9 3e-09 3.5e-07 31.0 0.8 1 23 237 259 237 260 0.96

4 9 8.2e-07 9.6e-05 23.3 1.7 1 23 266 288 266 288 0.95

5 9 1.4e-05 0.0016 19.5 4.9 1 23 294 316 294 316 0.99

6 9 0.00017 0.021 16.0 1.9 2 21 324 343 323 344 0.95

7 9 6.9e-09 8.1e-07 29.9 1.2 1 23 681 703 681 703 0.99

8 9 3.6e-07 4.2e-05 24.5 1.7 1 23 709 732 709 732 0.97

9 9 1e-05 0.0012 19.9 3.4 1 23 738 760 738 760 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.045	5.3	8.4	0.0	2	23	179	201	178	201	0.93
2	9	0.089	11	7.5	0.1	1	23	208	231	208	231	0.93
3	9	3e-09	3.5e-07	31.0	0.8	1	23	237	259	237	260	0.96
4	9	8.2e-07	9.6e-05	23.3	1.7	1	23	266	288	266	288	0.95
5	9	1.4e-05	0.0016	19.5	4.9	1	23	294	316	294	316	0.99
6	9	0.00017	0.021	16.0	1.9	2	21	324	343	323	344	0.95
7	9	6.9e-09	8.1e-07	29.9	1.2	1	23	681	703	681	703	0.99
8	9	3.6e-07	4.2e-05	24.5	1.7	1	23	709	732	709	732	0.97
9	9	1e-05	0.0012	19.9	3.4	1	23	738	760	738	760	0.99

Sequence Information

Coding Sequence: ATGTTGAGTAAAGGCGAAACTGTTGCGGGAAAGGAACGACCGCTTCTCTCGGCACCACAGGGTGGGACGCTTGGCTTGCCACGCGTAACCGTGCGTGGGGTCGAATCAAACGGGCTATGCAAGGGTGCTGCGGGGTTTGTCCGCGAGACAATTGGAAAAATCACTTGTTCCAGGGCCCTAAATGTCCCTGGGAGATGGGCGGAGGCGGAAAGAGGAATACGTATTGCTGGGAATGGCGTCAGAGGGTGGCTAGACGCGTCTCATGAAGCTAGCAATTGGCTAAAATATGTCCGAAGTACGGCTAGTCCTCATGCGGTCAATATGCGTCACGTTCTTATTGGCGGACAGGTGGTTTACGAAACAATCCGAGATGTAGCCGCAGGGGAAGAGTTGCTCCTTGGTCACCGCGAACCACTCCAGCTGCAGGATATGCTTGGGGAGAATACCGCGGAGGATCGGAGTGACAGGGAGACCGCCTCTCAGCACAGTGGAACTGTTGACGAAGAcagagaagaggaagaagagggTGATATCAGGTGCACCGTCTGCGATAGACCGTTTCAGGATATTGACCTACTCGACGGACATCTGGTGACCGGCCACAGGTATCCAGCTGAACAATATCCGTGTGAGACGTGTCACAAGGGCTACGCATGGAGGCCATTGCTTGTACGTCATCGTGCCATAGTCCATGGAGACCTGAAGAAGTACCAGTGTGAAAATTGTCCTAAGGTGTTCACTGATCCCTCAAATCTCCAGCGTCACATTAGGGCACATCACGTTGGCGCCCGAAGTCACGCCTGTCCGGATTGCGGGAAGACGTTCGCTACCAGTTCCGGCCTCAAACAGCATACCCACATCCATAGCAGCGTGAAGCCTTTTCAATGCGAGGTCTGCTTCAAGGCCTACACCCAGTTCTCCAACCTTTGCAGACACCGGCGAATGCACGCCGACTGTCGGGCTCAGATAAAGTGTGGTAAATGCGGACAGTCCTGCAGTTCAGCTTCTTCGCTTACGAAACACAAACGATTTTGTGACTCAACTGGACCGCCTGGACCACCAGGAAACATGCCTCAGCTTCCACCATCGGGACCAAGTCCGTTCTTGGTCTTTCCAAGACCTCCAGGATCGTTACCGGGTTCCCTGCCATTCTATCCACCAAATCTGATGGGTCCCTTCTCCGGAATGTATCCTACTCCACCAAACTTCTTAAACAGTCCACTGATGTTCCAACCGAAGACCGAAGAGCTTGAAAAGCGGTGTGATAGCCCGAAAAAGGAGAGGTTCACGCCACCTCGTGTTCCAACGCAACATAATAAGGTATCTCCTTCCACGGCCGAAGAAGCCACTTCAACATTCAGACCATCCCCTGCCAGACCACCCGTTCAACCTACACCTGAAAGTGACGATGAGCTACAATCGAAACACTCCAAGCCGGAGGTAAAGTCCGAAATAAAGGCCGATCCTGAGGCGACGGGGGAGTCGGCTGATCAACCCCTTGACCTCAGGGTCGAAACCAGAAGACGCCAGACTCCCAGTGTCGCCGGAAGTCATAGTCCCTCTCCGGCGTCTATGGTCGAGGAAGCTCCAGTTGGACATTGGAAAGTGAAGGATGAAGATCGACCGGAGGCCAGGGTTAAGGAATTAACGGTCAGCCCAGTCTGCAGTGTCGCGGAACAGCAGCCTCCGACGAACGCACCTTCTCACATGGCGTATCCACGTCCGTTCCGTCCCATGTTCTTGGACGCCATATACAGAACACCATCAGGAGCGTTTCCTGGCTTTCCAGGAGGCCATCCACCGTCTGCTGGTGGACCTGAATCCCGActactaccaccaccaccacctttCGGACCTACGCGTAGtggttttccttttttaggACCACTAGTGAACGGGTTGACTGGCGGTAGACCAGGAGGATTTGACCTCCTTGCTAGACCGCCACTCAGCGCGTTCTCCGGCATGAAGCCATTTCAAGAAGTGATGTCccaccatcatcatcaccatcatcatcctCACGGGAAGATAAAGGATCGTTACTCTTGCAAATTTTGCGGCAAGGTGTTCCCAAGGTCAGCAAATCTCACGAGGCATCTTCGTACTCATACCGGTGAACAACCCTACAAGTGCAAATACTGCGAAAGGTCATTCAGTATATCGAGTAACCTTCAACGTCATGTTCGCAATATACACAACAAAGAAAAACCCTTTAAATGCCCACTTTGCGAACGGTGTTTCGGTCAGCAAACGAACCTCGATCGTCATCTCAAAAAACACGAAGCTGACGATGGTAGTGGGGTTGTTGCTGTTGCCGATTCACCAGGAAGTAGCAATGAAAATGAACGGGAAGACTCATGCTTCGACGATATTAGGTCTTTTATGGGTAAAGTTACCGAAGGTGATgggtatggaattccccacaATTACCCTGCCTATTTACCTGGTAGACTTGATCATCTTCATGACCCGAAGATGGATGCCGAGTACGACGATGACGAGGATAGCGAAGAGGGAGTATCGCCTCTTGAAGAAAATGACGGTATGTCACCAATGGATACGAAAGAATCACCTCCACCTCAGTACGAGCTCAAGCTTAGGGATAAGCAAGAATTGCTCAATAATAATACCGCCGAACCAGTTATAGAAATATCGACATAG
Protein Sequence: MLSKGETVAGKERPLLSAPQGGTLGLPRVTVRGVESNGLCKGAAGFVRETIGKITCSRALNVPGRWAEAERGIRIAGNGVRGWLDASHEASNWLKYVRSTASPHAVNMRHVLIGGQVVYETIRDVAAGEELLLGHREPLQLQDMLGENTAEDRSDRETASQHSGTVDEDREEEEEGDIRCTVCDRPFQDIDLLDGHLVTGHRYPAEQYPCETCHKGYAWRPLLVRHRAIVHGDLKKYQCENCPKVFTDPSNLQRHIRAHHVGARSHACPDCGKTFATSSGLKQHTHIHSSVKPFQCEVCFKAYTQFSNLCRHRRMHADCRAQIKCGKCGQSCSSASSLTKHKRFCDSTGPPGPPGNMPQLPPSGPSPFLVFPRPPGSLPGSLPFYPPNLMGPFSGMYPTPPNFLNSPLMFQPKTEELEKRCDSPKKERFTPPRVPTQHNKVSPSTAEEATSTFRPSPARPPVQPTPESDDELQSKHSKPEVKSEIKADPEATGESADQPLDLRVETRRRQTPSVAGSHSPSPASMVEEAPVGHWKVKDEDRPEARVKELTVSPVCSVAEQQPPTNAPSHMAYPRPFRPMFLDAIYRTPSGAFPGFPGGHPPSAGGPESRLLPPPPPFGPTRSGFPFLGPLVNGLTGGRPGGFDLLARPPLSAFSGMKPFQEVMSHHHHHHHHPHGKIKDRYSCKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCERCFGQQTNLDRHLKKHEADDGSGVVAVADSPGSSNENEREDSCFDDIRSFMGKVTEGDGYGIPHNYPAYLPGRLDHLHDPKMDAEYDDDEDSEEGVSPLEENDGMSPMDTKESPPPQYELKLRDKQELLNNNTAEPVIEIST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01414411;
90% Identity: -
80% Identity: -