Aequ004196.1
Basic Information
- Insect
- Ametastegia equiseti
- Gene Symbol
- -
- Assembly
- GCA_963989295.1
- Location
- OZ022390.1:16013384-16028454[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 31 8e-06 0.00094 20.2 1.0 1 23 225 247 225 247 0.98 2 31 0.0035 0.41 11.9 1.9 1 23 270 293 270 293 0.96 3 31 0.00029 0.034 15.3 1.0 2 23 300 322 299 322 0.96 4 31 0.0014 0.17 13.1 0.5 1 21 342 362 342 363 0.95 5 31 0.00044 0.052 14.7 0.1 2 23 460 481 459 481 0.96 6 31 0.049 5.7 8.3 0.2 2 23 488 510 487 510 0.85 7 31 0.00015 0.018 16.2 0.1 1 23 575 598 575 598 0.96 8 31 0.03 3.6 9.0 0.4 1 23 604 627 604 627 0.96 9 31 0.15 18 6.7 1.5 1 23 640 662 640 662 0.97 10 31 4.3e-05 0.0051 17.9 0.6 3 23 707 728 705 728 0.96 11 31 0.013 1.5 10.2 1.2 2 23 792 815 791 815 0.94 12 31 4 4.7e+02 2.3 0.0 2 23 824 846 824 846 0.84 13 31 0.053 6.2 8.2 0.0 2 23 853 875 852 875 0.95 14 31 1.7e-05 0.002 19.2 1.2 1 23 883 905 883 905 0.98 15 31 0.48 57 5.2 1.2 3 23 939 961 937 961 0.90 16 31 0.00027 0.032 15.4 3.3 1 23 964 987 964 987 0.97 17 31 0.0071 0.83 10.9 0.4 2 23 994 1016 993 1016 0.95 18 31 0.0041 0.49 11.7 5.1 1 21 1044 1064 1044 1065 0.95 19 31 0.0034 0.41 11.9 1.8 2 23 1079 1100 1078 1101 0.93 20 31 4.9 5.7e+02 2.0 2.3 1 23 1104 1126 1104 1127 0.94 21 31 0.098 12 7.3 2.8 2 23 1134 1157 1133 1157 0.91 22 31 1.2 1.5e+02 3.9 0.2 2 23 1165 1187 1165 1187 0.95 23 31 3.2 3.7e+02 2.6 0.0 2 23 1194 1216 1193 1216 0.88 24 31 0.29 34 5.9 2.7 2 23 1225 1247 1225 1247 0.96 25 31 0.099 12 7.3 0.3 2 23 1253 1275 1253 1275 0.95 26 31 3.7 4.3e+02 2.4 3.3 1 23 1337 1360 1337 1360 0.90 27 31 3.3e-05 0.0039 18.3 0.5 1 21 1388 1408 1388 1409 0.95 28 31 0.63 75 4.8 1.3 2 23 1509 1531 1508 1531 0.93 29 31 2.1 2.5e+02 3.2 0.5 2 23 1538 1560 1537 1560 0.94 30 31 0.89 1e+02 4.3 2.5 1 23 1571 1593 1571 1593 0.97 31 31 1.5 1.8e+02 3.6 0.3 3 20 1602 1619 1602 1621 0.94
Sequence Information
- Coding Sequence
- ATGGAGTCGAAGGAACGATACGCCGAGATGTGCCGGCTTTGCGCCTCCTACGACGCTGTTAAAATGGACATTTTTGGTAAAGAGGGACGCAGTCGGCAGCTAGTCGACAAAATTCAGACCTGCCTTCCCTTCAAGatcacAGAAAATGATAGGCTGCCAAAATGCCTGTGCTATCGCTGCATGTACAACTTGGAAAACTTTTACGACTTCCGAACGGCATGCGTTAACGCTGTTGCCTTGCTGGAAAGATGTTTACCAGCTTATCCCAGCGAAACCAGAGATGGGCTGCAGAATAATAGCGATCAGTTTTCTCAGCTGCGATCAGAGCTGctcaagaaaaaagaaaacatgcCGATACTCATTCCAGAGGCACCGATAGTAAACCCAAATGGCGCTTTAGGAACGCCACCTAGATTAAATTCAGATGGAGAGGCAGatcatgaaattgaagaaatactCTATCAGGGTATCAGCGATGATGGTGCCGATGATCACGACGATCCAAAATCAGACGAGTATGAAATGGACATGGAAACAAATCCGAGCGATTTCTTGGAAATGACATCGATGGTCACTGAGGATGTAGACGAAAGCGAAACTGCTGCAAACGTACCCGTGGCTACTAGTAACGAATCTACCCCATTTCAACACACTTCTGAACAGCACGAAGTTTATGTATGCTCTTTGTGCAACAAAGCGTTCAGCTCAAAAGGACACTTGTCCTTACATGCTAGAATTCATGTAGGAGCCGGGGATATCGTCGGGGAAAAAGTCATCACCGATGATCATACGTCGTACAAAAGACCCTATCAATGCGATTTATGTAACAAATCGTATTCCACGGCTAAACACAGATGGGGTCATGTGTCAACAACTCATAGgGGACATCCGGCGGTAACGTGTAGATATTGTTCGAGGATTTATTCGACGCGGACAAATTTGGAGGAACATATAAAGTCGCGTCACGCCGGATTGCCGCCTCCACCAGAGTTGCCTGTCCCATATATTCAGCAAGACAATAAGTTCCAATGTAGAACTTGTCCAAAAATGTACACCAATGTGACGGATTTGAATAAACACAGTCGAGTATGTGGCGGGGataggaaaaaagaaataacgaaCAAGAATTCTTTATTGAAAAGAAAGGGCGCTGTCGATACCTCAGATTTGTCCAGTATGGATTCTGACGACGGTAGCAAAGATTATAGAGACGCTGAAGCTAAACTGGCCAAGAATCCTCAGTTAACTATACTCAAACAAGCTTTAACTAAAaaagataatttgaaaaggGATTACGACGAATCAAGGGCCAATTACAATAAACCCAAGAAAATATCAAGAACAGATAGCAGCGAGACTGATGCTCAGAAAAGATGGTACTGCGAGATGTGCCCGCAGAGCTTTACAACCGTAGACAGTCTGAAGGATCACGAGCAAATACACGATGCGGATAAACCTTTCATTTGTATATTGTGTGAAAAGGATTTTACTCTGAAATCATCGCTAAGCAGACACATTGTGGCATCCCATGGAGTTGATCCTAGTCCCATTATCGATAGCGATAAATGCCTCAAAAGGCCTTTgaacaaacacacacacacagaacGAGCAATAAACGATAACAGAGATATCAATGAGTCCTCGTCTTCTCCGCAGgATAATCCTGAAAATGAGTCCGAGCATGACAGCAATCCTGAGAACGTAATAGAAATCGAGACTGTTTTTGTCTGTGAGATTTGCACTCGCGATTTCAACGATCGTGCTTCGTTGTGGCTACACATTAGAGCGACTCACAAAGAGTATGCAGCTTTCGCATGCGGTGTGTGCCTCAAAATCTGCGCCGACAACACGCAGCTGCTGAATCATGTTAATATGTATCACGGGGGGTCGAAGTTACAAGTTTCGGAGCAAAGAAGGTACAGCTGTACAATCTGCGGCCGGCAACACGATTCGAGAAAAAAGTTGATCACTCATGTATCGATACATAACGTCGACCCTGGATATGACCCGGCCAGTTTCGTTCAACTGAATAGTAACTattacaatgaaaatttcaacagcaACGAAGCTAATGATCAGACTTTGGAGTTCGACGGCGAcgagggtgaaaaaattgattgctATATTTGTTACAAGTCTTTTCCCAGCGAGGATCACCTCATACGTCATCAACGAAATGCTcacaagTCTGAACCACTGGCACCAATGGGAGAGTCGGCTGGCAATGGAAGCGGGACTGGTTCTGTGAGTGGTAATGGAAACCGAGCACagtatcatttatttttcgtatGCGAATTATGTGGTAGTTCTCACCCAAGCAAATGGGAACGCTGGCTTCATGTCAGTAGTATTCACAGCAATGAGCCTGCTATTAGATGCGATCGAGACACttgcggaaaaatttttgccactAGATCACTTCGCAACGATCATATACAACATCATACTGCTCAAGGCGCTTCGCCTAACACCTGCGAAATATGCGGCAAACTTTGGGGTAGTCGAGTCGATTATTGGAAGCATGTGATGGGCGTTCACTCGGATACTGTGCCTTTAATTTGTGGAGTTTGTCTGAAGGTTTTCCCGGACGTGATTCAACTCAGTGCTCATGTCAAAAGCAAACATTGGCCACTTACGAACGGGGATTTTAGTTGCGATATATGCGGCAGACCGTATTCGAATAAATCAAAAATGTCAAGGCACAGAAAAATTCACGGGCTAGACGTAGACAGCTTCTTAAATAACAGTATTAACGAATCTATATGTAACGACTCGACTAGGATAGATCACAGCATTCCTGACTCTGATCTAAACTGCGAAATGTGTtcggatttgaaattttcagatctcgaAGAACTCTGTAATCATAGACGTAATGTTCACGGCTTATTTCCTTGCGATTTATGTAACAAATGTTACGGTAGAACCTCTCACTTATGGAAACACGTTAATCGTGTACACAAAGGACACGAGGATGTTACTTGTAGGTATTGTTTAAAGACAAGCGCTTCGAAAGAACATTTAGCTGCTCATATAGCTAAAATTCATAGGTACGAACCAGAGACTAAAAAGGAAATAAGAGAatcgttgaatttcaaatctacaAATATGACGGATGACGAAACGCCCCATCATTGCGAAAAGTGTAACAAAGGATTTCACAAACGATATTTATTGCGGCGCCACATGAAAGGGTGTCAAAACTATCGTAAAGATCCTGGGGCTCTTTTGACTAGATGCAGAGCTTGCGAAAGAATATTTAAAGATCGTGCCAGTCTACAAAAACACATTGAAAACCATCATAGCACTTATACTTGCCATTTATGCAAGGCAGACGTTACTTCAAAACTGGGTATTATGACGCACAATAGAGTTCATCACATGAATCATCCGGATTTAACTTGCGATCATAGCAGTTGTAAGAAATTATTTAGAACCAGGGAAGACCTGGAATCTCACAGAAAAGATCACAAGTATCACAATACTCCGAATGTTTGTGATTTTTGCGGCGATACTGTTGAAAATAAGCTTAAATTGAAAATGCACATTTTGTCATTGCATAGAAATGAGATCGGTGTTTCGTGCGGGGTTTGTTTGATTCCTATGAAGGATCCCAAAGAATTGAAAAGACACGTAGAAGAAGTCCATGACCATATTCTTTCCAAGCCCAACACTTGCCAGGTATGCGGGAAGCAATACGCTTCAAAGTGGAAGGCTTTCGATCACACTAAGAAATGCCATGGGAAAGTATTTAGAACTTGTAAACAGTGTCTTGCTGTTTTTACCAAAGATGAGGAACTCAGGAATCATTACGCTAGTATACACAATGTTCCAAAAGATCAGTTGTCTGGTTTTGATTATCGATTGGAAACTCCGACCGGTAAACCTGACGATTACGAAGCAACCGATTTACATATTAAAGAAGAACCGGATGATCTCGACTTTGACGTAGATCAATGTGACGAAGATTCTAACGAACGTAAACGAAAAAAGCCTTTAACTGACACGTTTGACTGTAATCTTTGTCACGagatatttttgaacaatGATACGTTGTCCCAACATTGTCGTAATGTGCATAACATGAATcctaacaaaaaattgaagaaatcaaaaaaagacGGGACAGGGgctaaaaagaaaattaggaACAGAGAAAACTTTGAATGTAAAAATTGCGGGAAACAGTTCTCTACGAAAACTCTGTTTTGGAATCATATCAACGTCTGCACAAGACGTAATAGTATAAGTAGAGATAGTAACAATAGTTTTCCCAGCTCGATTCTAGAAGcgcatttgaaaaataataatcaaataaaaaaagaagagccTGACCCTGATATTAACGAATCAAATCTAAATATACCAGATTTCAACTTGTTCGAAGATATCAACATGCAACTTTCAGGCCAGAAACCTGTACCTGACCTTATGCCAATATCTTCGATGAAAGGACATTCGAGTAGCAAATGCTCTCGTAAAGATTCTAGAAAAGTTTACGACGAATCTACCAATACAGAATGTGCCTGTGAAGTTTGCGGCAAGCAATGGCCGGCAAAGAAACACTTGTGGCAACATCTTATACGTTTTCACAGAGCAGAAGCAGCCGTTACTTGCGGGGTGTGCTTAAAGCTATGCCAGACGTACGAAGACTTAGCTAATCACTTGAAAGCAACTCATCAAGCCATTCTGACAGGCGAAGGAAACAATTTTACTTGCAAAACTTGTGGAAGATATCATAATGCTAGGAGTAAACTATTATTGCATATGAGCATTCATATCAATTATAACGGTAGCGAATGGTGTCAGAATTGCCATCAAGGATTTGAAGACGGAGAGAAGTTGACTGAGCATTTGGAAAATTGTACAGGAAAGCAAATCGAATTTGATGATCACAGTAACGACATCGATGTTAgagttaaaaatgaaattgacaaCGAAGACAAGGGTAGCTTGATAGATGATGATAATTCATTAATGGAGGAAGTAGAAGAGGTCGAATTCGAGTCTGAGGCAGAAGAGGACGCAACGGAAAATCATGACGATAGTAATAGCGATAATTCAGAGAGCGAAGCAACCAATGACAGTCTAAGCGACGAAGAAGACAATGAAGATGAGAATCCAGTTGAAGAAGACGATgtcgatgaagaaaatgaaatcgacGACGAATCCAGAACACATAGTAGAGTAACAGGAGACGTTAGCAGCGATTCACATAGCGAGGATGACGATTCAGAAAATCTCGGTGAAGATCTCTCTGAACATAGCGCAAATGATCAAAACGATAAGGAAGTAAACAACGCAAGCTTTCTCAGCGGAACTGACGATAATAACGTCATGGAAAATGAAGACTGCGAAGAAGACAAACTTTCGGCACAAGAAAAAGTCGGGAAAACcatagaaaaaatcaaaaaacaaatcattGATGTAAATATCGATGAGGAGTCTAAAGAACTTGCTGATCATTCACAAGCCCTAAACCTCAACGATAAAGAATTTGACGAAGGACCACCTTGCGAGCTTCAAAATCAAACCTTGTTCAAAGAAGAACCTGGGGATTACTTGGATGACGAAGGTCCGCCCATATTGAGCCCAATGGTACCATTACCTGGTGTAAATGATGCAGAAGACCATGAGACGGATCAATTGGACAAAGTGGGGCATGAGTTGAGTCCGATGGTACTAACATCTCCGAAAAACGAGATGTCCACAGTTAATTGCGAGTTGGAGGAAATCAAgaatgaaatagaaagaggAGAGACATCATTTTTGGCATCAAACTTGATGGAAATTGACAAAGATGAAAAACCAAGCGAAGATCCCAATGCGGCTGCTGATACTTTGACAGGAATATTGGAAACCGATTCAGAGAACGAGCAGGAAGAAGAAAAGCTTGTTCAGGATGGCGACGAAGTGTCTGAAGCTGAAGAAAAAGCTTCTGATAATGAAGAGGTTTCAGGAAATGAGAATCTTGTAGTAGAGGAAGATAAAGATCAGTTGGAGAACGATAGTGACGATGAAGATCAGTCCGAAAATGAATATCACAATAACGAAGATCTgtcggaaaatgaaaatcacgATGAAgtggaattggaaaatttcgaggaACCGCAACAAGAAGATCATTTCAAAGAAATGCAAGACACGACAGATTTAGTCGAGGAGGAGGACGAGGAAGAGGGCGAGGACGAGTACGAGGGGGGAGAAGAAGAGGATATGTTCGAGGAGAATTCGGATGGCGAAATAATAGATGATACAAACACTGTACAAATACCAAATTTAGATGGAACTGTACTTATGGTTGCAAACGACGCAGATGGTAATCAGATTTTAATACAACGAAACGTTTCTGATCTACCAAATGAAGATTCGAATTCTGAAGTTACGGAGTATATTTTAGAAGGCGAAAACGAGTatgaaatcaataattatgAGATGGCATCTAATGACGAGGATGCTACGCAACACTCTGACAATAGCCTGGAGGTATCgggggaagaaaataatgatgTAGCAGGTGAAGACGTTCAGATATCGATGATCAGTGCCAAAAGTAAAGTGTCAAGGACGTAA
- Protein Sequence
- MESKERYAEMCRLCASYDAVKMDIFGKEGRSRQLVDKIQTCLPFKITENDRLPKCLCYRCMYNLENFYDFRTACVNAVALLERCLPAYPSETRDGLQNNSDQFSQLRSELLKKKENMPILIPEAPIVNPNGALGTPPRLNSDGEADHEIEEILYQGISDDGADDHDDPKSDEYEMDMETNPSDFLEMTSMVTEDVDESETAANVPVATSNESTPFQHTSEQHEVYVCSLCNKAFSSKGHLSLHARIHVGAGDIVGEKVITDDHTSYKRPYQCDLCNKSYSTAKHRWGHVSTTHRGHPAVTCRYCSRIYSTRTNLEEHIKSRHAGLPPPPELPVPYIQQDNKFQCRTCPKMYTNVTDLNKHSRVCGGDRKKEITNKNSLLKRKGAVDTSDLSSMDSDDGSKDYRDAEAKLAKNPQLTILKQALTKKDNLKRDYDESRANYNKPKKISRTDSSETDAQKRWYCEMCPQSFTTVDSLKDHEQIHDADKPFICILCEKDFTLKSSLSRHIVASHGVDPSPIIDSDKCLKRPLNKHTHTERAINDNRDINESSSSPQDNPENESEHDSNPENVIEIETVFVCEICTRDFNDRASLWLHIRATHKEYAAFACGVCLKICADNTQLLNHVNMYHGGSKLQVSEQRRYSCTICGRQHDSRKKLITHVSIHNVDPGYDPASFVQLNSNYYNENFNSNEANDQTLEFDGDEGEKIDCYICYKSFPSEDHLIRHQRNAHKSEPLAPMGESAGNGSGTGSVSGNGNRAQYHLFFVCELCGSSHPSKWERWLHVSSIHSNEPAIRCDRDTCGKIFATRSLRNDHIQHHTAQGASPNTCEICGKLWGSRVDYWKHVMGVHSDTVPLICGVCLKVFPDVIQLSAHVKSKHWPLTNGDFSCDICGRPYSNKSKMSRHRKIHGLDVDSFLNNSINESICNDSTRIDHSIPDSDLNCEMCSDLKFSDLEELCNHRRNVHGLFPCDLCNKCYGRTSHLWKHVNRVHKGHEDVTCRYCLKTSASKEHLAAHIAKIHRYEPETKKEIRESLNFKSTNMTDDETPHHCEKCNKGFHKRYLLRRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHSTYTCHLCKADVTSKLGIMTHNRVHHMNHPDLTCDHSSCKKLFRTREDLESHRKDHKYHNTPNVCDFCGDTVENKLKLKMHILSLHRNEIGVSCGVCLIPMKDPKELKRHVEEVHDHILSKPNTCQVCGKQYASKWKAFDHTKKCHGKVFRTCKQCLAVFTKDEELRNHYASIHNVPKDQLSGFDYRLETPTGKPDDYEATDLHIKEEPDDLDFDVDQCDEDSNERKRKKPLTDTFDCNLCHEIFLNNDTLSQHCRNVHNMNPNKKLKKSKKDGTGAKKKIRNRENFECKNCGKQFSTKTLFWNHINVCTRRNSISRDSNNSFPSSILEAHLKNNNQIKKEEPDPDINESNLNIPDFNLFEDINMQLSGQKPVPDLMPISSMKGHSSSKCSRKDSRKVYDESTNTECACEVCGKQWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCQTYEDLANHLKATHQAILTGEGNNFTCKTCGRYHNARSKLLLHMSIHINYNGSEWCQNCHQGFEDGEKLTEHLENCTGKQIEFDDHSNDIDVRVKNEIDNEDKGSLIDDDNSLMEEVEEVEFESEAEEDATENHDDSNSDNSESEATNDSLSDEEDNEDENPVEEDDVDEENEIDDESRTHSRVTGDVSSDSHSEDDDSENLGEDLSEHSANDQNDKEVNNASFLSGTDDNNVMENEDCEEDKLSAQEKVGKTIEKIKKQIIDVNIDEESKELADHSQALNLNDKEFDEGPPCELQNQTLFKEEPGDYLDDEGPPILSPMVPLPGVNDAEDHETDQLDKVGHELSPMVLTSPKNEMSTVNCELEEIKNEIERGETSFLASNLMEIDKDEKPSEDPNAAADTLTGILETDSENEQEEEKLVQDGDEVSEAEEKASDNEEVSGNENLVVEEDKDQLENDSDDEDQSENEYHNNEDLSENENHDEVELENFEEPQQEDHFKEMQDTTDLVEEEDEEEGEDEYEGGEEEDMFEENSDGEIIDDTNTVQIPNLDGTVLMVANDADGNQILIQRNVSDLPNEDSNSEVTEYILEGENEYEINNYEMASNDEDATQHSDNSLEVSGEENNDVAGEDVQISMISAKSKVSRT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -