Basic Information

Gene Symbol
-
Assembly
GCA_963989295.1
Location
OZ022393.1:17257808-17263510[-]

Transcription Factor Domain

TF Family
zf-BED
Domain
zf-BED domain
PFAM
PF02892
TF Group
Zinc-Coordinating Group
Description
The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 14 0.55 5.9e+02 1.3 0.1 17 29 124 136 114 152 0.74
2 14 0.0025 2.7 8.8 0.1 16 38 153 172 144 173 0.85
3 14 0.03 33 5.3 5.0 18 39 183 201 180 208 0.79
4 14 0.00012 0.13 13.0 2.8 15 39 218 243 213 246 0.87
5 14 0.1 1.1e+02 3.6 2.1 17 40 247 267 244 273 0.86
6 14 0.068 73 4.2 1.9 15 28 272 285 264 296 0.80
7 14 0.0011 1.2 9.9 1.1 12 39 297 321 289 327 0.83
8 14 5.2 5.5e+03 -1.8 1.0 14 24 347 357 337 363 0.82
9 14 5.4 5.8e+03 -1.9 7.7 17 40 379 399 369 406 0.82
10 14 0.0038 4.1 8.2 1.2 11 39 463 488 459 496 0.79
11 14 0.00013 0.14 12.9 2.0 14 40 504 527 498 532 0.77
12 14 0.0054 5.7 7.8 1.5 6 28 525 545 521 556 0.78
13 14 0.0011 1.2 9.9 1.7 18 37 563 579 559 585 0.75
14 14 0.0045 4.8 8.0 2.5 6 39 580 609 575 611 0.82

Sequence Information

Coding Sequence
ATGGTGCAGTACTGCCTGCTATACAAGATCGATACGATACTCTATGATAACGTTGGCAGAATGAGACGTATCGATGGAACTCATCAGTCAGATAAAGACGTTTCAACAATGAGAGGGTTTCTCGATTATGTTGAGACTATTACAACAGAAGATATTAAAATTGAGTTTCAggattcgataaaaatgaaCCAAAGTGTTCTTGCGTCGCATAAATTTGGCGAAGTCAATCTAATGGATCTAATGAAAAAACACACATTGGAAAAATCTTCCATCCAATACGACGATTTGCCAGAATCGCAGGATCTCTTCGAAGAGGGAAACAAAGCCTCGGATATTAAATGGAAactgaatgatgaaaatggaAGTCTTTATCGATGTGCCATTTGTcagattcaattttctaacAGAGTTTCATTGGACAGACACATAGTAGATTTGCATTTGGGTACGACTGGTCGTTTCCAATGCGATATTTGCCACAAAGAGTTTTCACGAGTCTCAGATTTGGCTAGACACAAACTGATACACTCTGGCGTTAAACCTTTCCAATGTAATACTTGCCATAAACAATTTTCTAGACAAGATCATCTTAAGCAACACATACTATGCCATTCTCAATGTTCGGATAGTGAGCTTTTCGCTTTTGAAAACGGTCTGAACAGATGTACCATTTGCCATAAGCAATTGTCGAGACCTCAGCATCTCAGAACTCATATGAGACAACATTTAGGTACTTTGTTCGAATGCGATAAATGCAGCAAGAGATTTTCTCGTGCTTCTCACCTCAGAGCTCACATGCGACTTCACTTAGGAACTTGTTTTCGATGCGATATTTGCCGAAAAGAATTCTCTCGACCTTCAGATTTAGACAGACACAAACTCACCCATTTAGATAAGAAATTATTCGAGTGTCCTACTTGCCAAAAGAAATTCTCTAGAAAAGATAATCTCAAAAAGCACATGCTTTCTCATGTCGAATCTTTACcgacaaataaaaattacgtTAACGTTACGGAAGAAACCGGGTGtttaaattcaaacaaaaattgccaGTGCGGTATTTGCCTCGCTAAGCGTTCTCTAAGTTCTCCCGAATTTGAAGGACACGGTATTATCCACTCTGATATAAAGTGCCACGAATGTCACGTTTGCAAAAAATACTTTACCAGGAAAGATCACTTGAGGAGACATCTCGCTTCGCACAAAATATCTTCTCATGATAAAATCATGGATTGTTATCTGACTAGTAAAAGACAAAAAGACCAAATGCTTTTTGACGGTGTTTCAAACTCTGCTCAATCCGGAGAAGAATCGAACGATTGCGGTCCATGCGAAGTAGAACAGTTTCCAAGTAGAGTTAATTTGGACAATAATACATGTTCGCATAGTTTGTCAGAGAAGAAATTTGAGTGTGCGGTTTGCGAGAAACGTTTTAACAGAAAAGTTAGATTAAAAGAACATGTTCGTATGCATGGAGATAGTAATTTAGAGTTTAATGAGCCAGGAAAGAAGGAGCAAAACCGATGTAATATTTGCCATAAGCAATTGTCGCGACCGGAACACTTAAAAGCACATATGAGACTGCATCTCGGGACGCTATTCAAGTGTGAAATTTGCCATAAAGAATTTTCTCGTTTGTCTGATCTGGACAGACACAAGTTAGTACATTCTGGAGTCAAGCAATTCATATGTATCATTTGCCACAAACAATTCTCTAGGAAAGATTACCTTAAAAATCACATGCTTTCTCACGctaatcaaaaatcatttgaatgcGACAAGTGCAAAAAACGTTTTACCTATTTCACCAATCTGAGAAATCATTTGCATCTTCATATTGGGGATTGA
Protein Sequence
MVQYCLLYKIDTILYDNVGRMRRIDGTHQSDKDVSTMRGFLDYVETITTEDIKIEFQDSIKMNQSVLASHKFGEVNLMDLMKKHTLEKSSIQYDDLPESQDLFEEGNKASDIKWKLNDENGSLYRCAICQIQFSNRVSLDRHIVDLHLGTTGRFQCDICHKEFSRVSDLARHKLIHSGVKPFQCNTCHKQFSRQDHLKQHILCHSQCSDSELFAFENGLNRCTICHKQLSRPQHLRTHMRQHLGTLFECDKCSKRFSRASHLRAHMRLHLGTCFRCDICRKEFSRPSDLDRHKLTHLDKKLFECPTCQKKFSRKDNLKKHMLSHVESLPTNKNYVNVTEETGCLNSNKNCQCGICLAKRSLSSPEFEGHGIIHSDIKCHECHVCKKYFTRKDHLRRHLASHKISSHDKIMDCYLTSKRQKDQMLFDGVSNSAQSGEESNDCGPCEVEQFPSRVNLDNNTCSHSLSEKKFECAVCEKRFNRKVRLKEHVRMHGDSNLEFNEPGKKEQNRCNICHKQLSRPEHLKAHMRLHLGTLFKCEICHKEFSRLSDLDRHKLVHSGVKQFICIICHKQFSRKDYLKNHMLSHANQKSFECDKCKKRFTYFTNLRNHLHLHIGD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00060529;
90% Identity
iTF_00060529;
80% Identity
iTF_00060529;