Aequ026626.1
Basic Information
- Insect
- Ametastegia equiseti
- Gene Symbol
- -
- Assembly
- GCA_963989295.1
- Location
- OZ022403.1:1323979-1326761[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.4e-10 2.6e-07 31.0 0.0 2 42 20 61 19 63 0.90 2 2 4 3.1e+03 -1.3 0.1 14 23 144 153 141 154 0.79
Sequence Information
- Coding Sequence
- atgccaagaaaatacacaaaaaagGTCACTGAGGGCTGCAAGCGGGGACAGTGGTCAGAAGCTGATCTCAAAGAGGCTGTTAGAAGATTGGATGCTGGCGAAATAGGAGTTAACGAGGCTTCCAGGTATTACGACATCCCTAAACGGACACTCTGCCGAAGAAGAAAATCTGGCAACCTCGAAAAACTTTCGTTAGGGCCACAAGCGTGCTTAGGttttgataatgaaaaacggCTCGTTAAACACATACAGCGACTGGAGAAATGTGGTTTTGCACCTGATCGGATGGCTGTGCGGTTTGGCAGTTTGGCGTTTCAGTTCGCTGAAAAACTCGGTATTCAACACAGGTTTGATAGAGCGACAAAGCTCGCAGGGTACGATTGGCTGGCGTCATTTTTAGAAAGAAACAGCGAAATTACGATTAGACAGTCAGAAGGATTATCAGTGGCACGTGCGCAGGGATTTTCCAGGGAAGAAGTCCAGCAATTTTTCGACTTACTCCTCGAAGTTTACACCGAACACGACTTATTCGACAAACCGGAGAACATTTACAATATGGACGAGTCTGGATTACAACTTAACAACAAACCAGGGAAAGTGGTCGTAACTAAGGGCGCCAAGGACGTCCACGTCGTTACATCTAGCGAGAAAGGAGAAAATATTACTGTTATTGCCTGCTGCAATGCTGAAGGTTCATTTCTCCCTCCCGTCCTTATAATGAAAGGAAAACGACAAAAAGCTGAGTTTTCGGATGGACTACCACCTGGTgctaaaatatatatgaacgAAAAGTCGTCGTACGTCAACtcggaattatttttcacctgGTTGAAGGAACATTTCTTGCCCAGAAAATCTCCAGGAAAAGTTCTATTGCTACTAGACGGACATACGTCCCACTCCACCGCTTTTGAAATGCTCGAGTTTGCAAACGCCAATGACATAATACTCTTATGTTTACCTAGCCACACCACCCAAGCCCTACAGCCCCTGGACAGATCGTTTTTTAAGCCGTTGAAGGattatttcaaacaagttaCCCAGAACTGGATTCTACACCACGCCCAACGAAAAATAACTAGATTACAAGCAGGACAGCTTATCGGAAAGGCCTGGACCAAAGCAACGTCTGTGCAGACAGGGATTTCTGGTTTCAAGGCAACGGGAATATACCCCTACGATCCACAAGCCACACCCGATCACTTTTTTACGATTTCAGATATTTCCAAGAGTGCAAATGATCTAGTTAAACAGAACTCGAAGCTTATAGAACTTGAAGAAACCGATCCTGTAGAACCCGTTGCTGGACCTTCGACCGTACCCAACCCTTACGGCGGAGgcGACAAAAGACGTAAGCAGTCTGCTGAACTATTAACAACACCTGAGCGAATTCAAGAAAAACGATCGAAGTTAACTGAAAAACTCAAGAAAAATCCAACGAAACCACCccccgaagaaaaaaaaACAAGAAAATCTTCTTCAGATGAAAGCGATTTGGAAACATCTTCCCATTCTATGAGCGACTACGAAGATTCCTGTGTCGaatgtttgaaaaagtatCGCGATACAAAACAGAAGGTAGATTGGGTGCAATGTCTCAAATGTGAAGAGTGGTTGCACGAAACGTGCACTCTGTATAAAGATAAGTGCAATACCTGTGGACGTCAGGAGAAACGTGCCAAAGTTGCTAAGAagcattaa
- Protein Sequence
- MPRKYTKKVTEGCKRGQWSEADLKEAVRRLDAGEIGVNEASRYYDIPKRTLCRRRKSGNLEKLSLGPQACLGFDNEKRLVKHIQRLEKCGFAPDRMAVRFGSLAFQFAEKLGIQHRFDRATKLAGYDWLASFLERNSEITIRQSEGLSVARAQGFSREEVQQFFDLLLEVYTEHDLFDKPENIYNMDESGLQLNNKPGKVVVTKGAKDVHVVTSSEKGENITVIACCNAEGSFLPPVLIMKGKRQKAEFSDGLPPGAKIYMNEKSSYVNSELFFTWLKEHFLPRKSPGKVLLLLDGHTSHSTAFEMLEFANANDIILLCLPSHTTQALQPLDRSFFKPLKDYFKQVTQNWILHHAQRKITRLQAGQLIGKAWTKATSVQTGISGFKATGIYPYDPQATPDHFFTISDISKSANDLVKQNSKLIELEETDPVEPVAGPSTVPNPYGGGDKRRKQSAELLTTPERIQEKRSKLTEKLKKNPTKPPPEEKKTRKSSSDESDLETSSHSMSDYEDSCVECLKKYRDTKQKVDWVQCLKCEEWLHETCTLYKDKCNTCGRQEKRAKVAKKH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -