Aequ024504.1
Basic Information
- Insect
- Ametastegia equiseti
- Gene Symbol
- -
- Assembly
- GCA_963989295.1
- Location
- OZ022401.1:2324669-2326705[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.8e-11 6e-08 33.0 0.0 1 39 20 59 20 64 0.90 2 2 5.4 4.2e+03 -1.7 0.0 13 22 134 143 134 143 0.88
Sequence Information
- Coding Sequence
- ATGCCCCGAAAATATACAAAGAGAAATACTGAAGCTGCTGCTACGCGGGGGCAGTGGACTGAAGAGAATCTGCGGGAGGCTATAAAAAGGATAGATGCTGGAGAAATAGGTATCAACGAAGCATCAAAATACTATGGCATTCCCTCACGAACTTTACGCCGTCGAAGAAGTTCCGGCATTTTCGAAAAGCTTCCACTCGGGCCACAAGGAACACTGGGTACGGAGAATGAAAAGCGTTTGGTGAGGCACATACAAAGACTCGAGTCTTGCGGATTTGCACCAGATCGACAGGCTGTTCGACGTCTTGCCTATCAATTTGCTGAAAAACTTGGCATCAGCCATAGATTCAATAAAGAAACGCAGTGTGCAGGGCGCGATTGGCTGATGtcgtttttggaaagaaataaagaactCAGCATTAGACAAGCCGAGGGATTGTCTCTAGCACGTGGTCAAGGCATGTCTAGAGATGAGGTGaatggatttttcgatttgcTGTTCGAAATCtacaataaatataatttctttgaGAAGCCTGGAAGTATCTACAATATGGATGAATCGGGCCTACAACTAAATAACAAGCCGGGAAAAGTACTTGCAACCAAAGGTGCTAGAGATGTGCATGTAGTGACATCGGCTGAAAGAGGTGAAAATGTCACCGTAATTGCGTGTTGCAATGCGGAAGGGACTTTTCTTCCTCCAGTGATAATTATGAAGGGCAAACGGCAGAAACCAGAATTCTCTGATGGGCTACCTCCAGGATCCCGAGTTTACATGAACCAGAAATCTTCGTACATtaattcggaactttttttCGCTTGGTTGAAGGATCATTTTTTGCCAAGAAAAGCCCCAGGCAAGGTTCTTCTGATACTGGACGGGCATGTATCCCATTCCAATGCATTGGATATGCTTGAATTCGCGGACGCTAACGACATCCTTCTTCTGTGCTTACCTAGCCACACGACTCAAGCTTTACAGCCTTTAGACAGAGCTTTTTTCAAGCCGctgaaagattatttcaagCAAGCCACAGCGAACTGGATGCTGCATCATCAGGACAGAAGAATCACTAGACTGCAAGCAGGATCACTTATTGGAACAGCGTGGGTTAAAGCAACATCTGTTCAGACAGGAATTTCTGGGTTTCGAGCAACGGGAATTTATCCGTTTGATAGAACAGCGATACCTGACCACTTTTTCGCAATTTCCGATAATTCTAAACGCGCTGATGATCCTTCGAAAGACGATGTCGAATCGATTGCATTAGCCGAAGAAAATCTAACAGAAGCAGAACCTACTGCAGGTCCATCCAATGTTTGTCGTAGTCCAGTATCTGGACTCAAAGCAGTTACCTCAGCTGTCCCGAAAGCGCTAGACCAACAGGAAACACCGACAAAACACTTGATGGAAATCCGCCCAGTACCAAGAATCCCCCTGCCATTAAATAAAAGACGCAAGCAGTCCGCAGCACTTCTCACGACGCCGACTGTGTTAGATACAAAACGAAAGAAGCTTCAGGAAAAAGAGAACACCAATACCGGAAATATGCTCGtccaagaaaaaaagggaTTGAAGACACAAAGGCACGCAGCAACAATTGGgagaaaatcaaaacaaaagtTGCCTGTGGATGTGAGCGATGTTGATGCCGAATCGTCAGATCCTTCGAGTGACTGTagcaaaataagaaaaactaaaaaggAGTCCGGGAAAAAAGAGGCCAAGgttgcaaaaaataaagttccgaaacaaaagaaaatattgaaaaatgaaggaagtagaataaagaaagagaaaatgcCATCAAGCGAAAgcgattctgaacaaaaatcgTCAGATTCTCTGAATTCTTACGAAGATTCCTGCATCGAATGCCTTGAAAATTACCGCGATACGAAGGAAAAGGTAGACTGGTTGCAGTGCATTGGTTGTGAAAACTGGATGCACGAAACCTGTACCATGTACTTAGACAGGTGCAATAAATgtgggaaaaaagaaaagcgtGCTCAAAAACGTGTGACACGTAAATAA
- Protein Sequence
- MPRKYTKRNTEAAATRGQWTEENLREAIKRIDAGEIGINEASKYYGIPSRTLRRRRSSGIFEKLPLGPQGTLGTENEKRLVRHIQRLESCGFAPDRQAVRRLAYQFAEKLGISHRFNKETQCAGRDWLMSFLERNKELSIRQAEGLSLARGQGMSRDEVNGFFDLLFEIYNKYNFFEKPGSIYNMDESGLQLNNKPGKVLATKGARDVHVVTSAERGENVTVIACCNAEGTFLPPVIIMKGKRQKPEFSDGLPPGSRVYMNQKSSYINSELFFAWLKDHFLPRKAPGKVLLILDGHVSHSNALDMLEFADANDILLLCLPSHTTQALQPLDRAFFKPLKDYFKQATANWMLHHQDRRITRLQAGSLIGTAWVKATSVQTGISGFRATGIYPFDRTAIPDHFFAISDNSKRADDPSKDDVESIALAEENLTEAEPTAGPSNVCRSPVSGLKAVTSAVPKALDQQETPTKHLMEIRPVPRIPLPLNKRRKQSAALLTTPTVLDTKRKKLQEKENTNTGNMLVQEKKGLKTQRHAATIGRKSKQKLPVDVSDVDAESSDPSSDCSKIRKTKKESGKKEAKVAKNKVPKQKKILKNEGSRIKKEKMPSSESDSEQKSSDSLNSYEDSCIECLENYRDTKEKVDWLQCIGCENWMHETCTMYLDRCNKCGKKEKRAQKRVTRK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00718482;
- 90% Identity
- iTF_00060117;
- 80% Identity
- iTF_00060114;