Basic Information

Gene Symbol
ct
Assembly
GCA_963989295.1
Location
OZ022391.1:14905367-14922557[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.4e-27 8.2e-24 84.1 0.0 2 72 415 486 414 491 0.95
2 3 2.4e-32 1.4e-28 99.4 0.0 2 77 824 900 823 902 0.96
3 3 1.3e-30 8e-27 93.8 0.0 3 75 1057 1130 1055 1134 0.95

Sequence Information

Coding Sequence
ATGCTCACCCAACCTCCACCTAACCCCCTCGAACCAACCCACTCCCCCATCACCGACCCCTCGGCGAACCACCCAACCAGCCATCCAGCGATCAGTCAGCTGAGTGAAGAAGTGACGAGACTACAACAGAGTCTTCAACGGCTGCAAGAGACCAGCGCTCAAGCCACGGCCCGTTTGGAAGAGGAGCTTGAGCTACGCAGACAACACATAAACAGACTGGAAGCCAGACTCGAGAGACAAAGAGACTATGACGACCTAAAACGCGAAATTAGTGTTTTGAGATCGGTGGATTTCTCCCAAATACCAACCGGTGAACCGGGCAAAAGCCTGGAACATCTTCTCCTCGAGAGAACGAAAGCTCTTCAACAAACGGAGAGCTTGAAGCCACCCACAACGCCTGACGCACTTGGTGGCCTTGCTTCCCCCCTGCAGCGAGCCGCGACCTCCTCGCCTCACGGCGGCAACGCGCTACCCTCAGCATcccaaccaccaccaccaccaccgccacctccaccaccaccattACCAGCCCCTACCCGATCAACCCCGACACCTTCTTCGGCGACCTCTTCGTCCTCCTTACTTTTCCATCCGCCGCTCCAAAACGTGGAGACGTTCGGCTCATTCCTCGGCGAGGAGATCGTCGCCAACTGGAGGCGGTCCCTGGAGAGGTCTATCATGAGTCAGCAGCATCCCCAAGTCTCGCAAAGCCAGCCTCAGCTGTTGCACGGGCCCTCGTTAAACCATCTTCCGTCACCGACAGATTCGACGAACGTACCGGCTAAGTCAAACACCCCACTGGGCAGCGGTCTGGATGCTTCGGAAAAAGCACCGACGCCTATTCCTGGCCAGGAGACACCAGCCCCACCAACACCGTCTTCGACAGCGGGCCTGACGTCACCATCCAGCCTTCAACCAACACCAGTGGCAATtgaccagcagcagcagcaaccaCCACCGTCGATGAACGGGATACCGCCTAAGAGTCCTGTGGAGGAGTCCTGTCACAATAACAACAATTCTCATCATCTGACGAACAACAATATCGGCGGTGGTCTCAGCGTCCTGGACACCCTGAAGAGCCCGTTTCGCTTCGACGATCACAGGGCGCATTTTCGGTTCGCTGACGAACTCGGGGCTGCTGGGATGGCCGGACGCCTTGGAGAGTCGCTTATTCCAAAAGGTGACCCGATGGAGGCTAGACTTCAGGAAATGTTACGTTACAACATGGACAAGTACGCGTCGCAGAATCTTGACACACTTCATATCGCTAGGCGAGTAAGAGAACTTTTGTCGATACACAATATTGGCCAGAGACTCTTCGCCAAGTATGTACTCGGCCTTAGTCAAGGCACCGTAAGCGAACTACTTAGCAAACCAAAGCCATGGGACAAGCTGACCGAGAAGGGGAGAGACAGCTACAGAAAGATGCACGGCTGGGCTTGCGACGACAACGCTGTTATGCTGCTCAAATCTCTGATACCCAAAAAAGAGTGTGTTCCAGGCAAGGAGCAAGGGATGCCGACATTTGCCCGAGGACCCCAAGACGGTGGTCCTCAGGATATGAGCGACGAACGTTTGGCCCATATGCTTTCGGAGTCTGGTCATCTACAGATGCGTGGTGAGCACGACACCTCGAATGATGCAGACAGCAAAAGTCCGCACCGAGTCGGTTGCCCCAGCCCCTTCAGCAAGGAAAGGATGGACAGTCTTAACAGGAGAGTTAAGAAGTACGAAAACGATGACATTCCTCAAGAAAAAGTCGTGAGGATCTACCAGGAGGAACTTGCCAAGCTCATGGGACGCAGAGTTGATGATCTTCGCGGACCCAGAGACTTCCCTCCGAGCGCGATGTTTCCTCCCTTTTTCAGCGGCGCCCAGGGTATGCAAGGGATGGATCGTACGCAGGAGGACATCCGATTGGCTCTCGACGCTTATCACCGTGAATTACAAAAGTTGAACTCTGGACCTGGGCAAAATCCTGCCTTAGCCGGACTTCCCGGTCTTCCAGGACTTCCGGGACTATTAGCTCTACAGCAACAAGCTCTGCAGCAACATCACCTAGCAACTAATGGCGGTGGAGTACAAGACCTAAGTCTCGTCAAAGTAGATCCAAGGAATAAAATGATGAACGGAGTTTCGGAggaagaaaaggagaagatgGAGGAGGCGATGAGGCATGCTGGAAGTGCTTTCTCCTTGGTAAGACCAAAGCAGGAACAACCAATCGGCCCGCAATCTACCCCAGGTGGTTCGAGCGCGAGTTCTCCGTTGGGAAACTCGATTTTACCCCCAGCTATGACGCCGAGTGAGGAATTTGCCGGTGCTGCGGCAGCAAGTCCTCTACAAAGAATGGCGTCCATAACTAATAGCTTAATCAGCCAACCGTCCACTCCCACCCACCATTCGCCAAATCAAAGACCGTTGAAGGCAGTATTACCACCGATAACGCAACAGCAATTCGACATGTACAACAATTTGAATACCGAAGATATCGTGAAAAGGGTGAAGGAGCAGCTCTCACAGTACTCAATTTCTCAACGTCTTTTCGGTGAGTCGGTTTTGGGACTTTCTCAAGGATCGGTATCCGATCTTTTGGCCAGACCAAAACCCTGGCATATGTTAACACAAAAAGGACGTGAGCCATTCATCAGGATGAAGATGTTCCTCGAGGACGACAACGCGGTACATAAACTCGTCGCTAGCCAGTACAAAATCGCCCCGGAGAAGCTCATGAGGACCGGCGGCTACGGCGGCCTGCCTCGTAAGTTTAACTCAGCATGCGGAACTCCAATGAAACCAATGCCACCAACAAAGCTAGTTCAAGAGCAACTCCAAAATGCTGCAAAGGCTCAAGCTGCTGCGCAAGCCGCGGCACAAGCAGCGGCACAACATCAGCAGGAGAGTCAGATGCAGCTTGGACCTCCTCAACAGAGTCCACAGCATCCGCAACACCCACAACATCCACAACACCCGCAACCACCGCCACCTATGATTCTCACTCCTCCGGGACCTCATCATTCTCATGCTCAACTTAGTATGCAAGAGCTACAGAAGAAACAACAACAGATGAGCCTTCATTCGCCTCATCATCAAATGACGCCTTCCCCACTTCGTGGACTTCATCCTCATATTTCACCGAGCGTTTATGAAATGGCCGCGCTCACTCAGGACCTTGATACTCAGACGATTACAACTAAAATCAAGGAGGCTTTGTTGGCCAACAATATTGGACAAAAGATATTCGGCGAAGCTGTACTCGGTCTGTCTCAAGGATCGGTTAGCGAATTATTGAGCAAACCTAAACCCTGGCACATGCTTAGTATCAAGGGACGCGAACCTTTCATTAGAATGCAATTGTGGCTTTCGGATGCTCACAATGTCGACAGACTTCAAGCATTGAAGAACGAACGACGAGAGGCTAATAAAAGACGAAGAAACAGCGGTCCTGGTCACGACAACAGTTCAGATACGTCGAGCAATGACACTGCTGAGTTTTATCACGCCGCTTCTCCTGGCCCTGGTCCTGCATCAGCGAAAAAACAACGTGTTTTATTCTCTGAGGAGCAGAAAGAGGCCCTTCGACTCGCCTTCACCCTTGACCCTTACCCAAATGTTGCTACAATAGAATTCCTGGCAAGCGAACTCGCCCTTTCTTCAAGAACGATAACGAACTGGTTCCACAATCACAGAATGCGGCTTAAGCAGCAGTCCCCACATGGTCCGCAGGAAGCTCAGTCTCCGAGGGAACCGGGCCAGCCTTTCGACCCTGTACAATTCCGACTTCTTCTTAACCAAAGACTGCTCGAAATACAGAAGGAAAGGCTGGGTCTTGGGAACGTTCCAATTCCCTACCCACCCTACTTCAATACAAACCTTGTTGCCCTTGTCGGTAGCGCCCTCAAGGAGCAATGCTCGGGTCTGGACCTTTCCATGGGTGCCTTAAAGAGGGAACCCAACCAGGAGTTTGAGGACGACGACGGTGACGATGCTATGAGTAATCTTGGTAGCGAGGACTCTGATGGTTCGGGAGGTAGCATAAAACGTGAACCAACGGAGACCCCAGCACCGACAACTGTTCGATCAAATAGAAGAAAACCTGCAGCACCACAATGGGTGAATCCGGAATGGCAGGAACCAGCCAGAGCTGGAGACGAAGTAATAATAAACGGAGTATGCGTTATGCAGACTGATGATTACGGAGTCAAAAGAGAAGCTGAGGAAACCGTGCGCGTTGAACCTACTCCTGTTCAAGACAGATATGAGGAAGATGCTGGCAGTGATTCTTCCTCGGCGTCTGGTGCAGGGCAAGGATTACAGGACAGAGATAGCCCCATGCCCAGTCCAAAGTCTGGTCAACACAGTCCGATAACTTTGCCAAGACCACCTTCGGAGCAGCCTAGtatgcagcagcagcagcagcagcaacagtcGGTGCATGATGAAAATGTTAAGGATGTTGTAAAGCACGAGCCAGAGGAAGCGTGGGATTATTAG
Protein Sequence
MLTQPPPNPLEPTHSPITDPSANHPTSHPAISQLSEEVTRLQQSLQRLQETSAQATARLEEELELRRQHINRLEARLERQRDYDDLKREISVLRSVDFSQIPTGEPGKSLEHLLLERTKALQQTESLKPPTTPDALGGLASPLQRAATSSPHGGNALPSASQPPPPPPPPPPPPLPAPTRSTPTPSSATSSSSLLFHPPLQNVETFGSFLGEEIVANWRRSLERSIMSQQHPQVSQSQPQLLHGPSLNHLPSPTDSTNVPAKSNTPLGSGLDASEKAPTPIPGQETPAPPTPSSTAGLTSPSSLQPTPVAIDQQQQQPPPSMNGIPPKSPVEESCHNNNNSHHLTNNNIGGGLSVLDTLKSPFRFDDHRAHFRFADELGAAGMAGRLGESLIPKGDPMEARLQEMLRYNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDDNAVMLLKSLIPKKECVPGKEQGMPTFARGPQDGGPQDMSDERLAHMLSESGHLQMRGEHDTSNDADSKSPHRVGCPSPFSKERMDSLNRRVKKYENDDIPQEKVVRIYQEELAKLMGRRVDDLRGPRDFPPSAMFPPFFSGAQGMQGMDRTQEDIRLALDAYHRELQKLNSGPGQNPALAGLPGLPGLPGLLALQQQALQQHHLATNGGGVQDLSLVKVDPRNKMMNGVSEEEKEKMEEAMRHAGSAFSLVRPKQEQPIGPQSTPGGSSASSPLGNSILPPAMTPSEEFAGAAAASPLQRMASITNSLISQPSTPTHHSPNQRPLKAVLPPITQQQFDMYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAAQAAAQAAAQHQQESQMQLGPPQQSPQHPQHPQHPQHPQPPPPMILTPPGPHHSHAQLSMQELQKKQQQMSLHSPHHQMTPSPLRGLHPHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNVDRLQALKNERREANKRRRNSGPGHDNSSDTSSNDTAEFYHAASPGPGPASAKKQRVLFSEEQKEALRLAFTLDPYPNVATIEFLASELALSSRTITNWFHNHRMRLKQQSPHGPQEAQSPREPGQPFDPVQFRLLLNQRLLEIQKERLGLGNVPIPYPPYFNTNLVALVGSALKEQCSGLDLSMGALKREPNQEFEDDDGDDAMSNLGSEDSDGSGGSIKREPTETPAPTTVRSNRRKPAAPQWVNPEWQEPARAGDEVIINGVCVMQTDDYGVKREAEETVRVEPTPVQDRYEEDAGSDSSSASGAGQGLQDRDSPMPSPKSGQHSPITLPRPPSEQPSMQQQQQQQQSVHDENVKDVVKHEPEEAWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01394913;
90% Identity
iTF_01200041;
80% Identity
iTF_00060081;