Basic Information

Insect: Amblyteles armatorius
Gene Symbol: GLIS3
Assembly: GCA_933228735.2
Location: OW121695.1:1660178-1667080[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.00047 0.032 14.7 0.2 1 23 338 363 338 363 0.97

2 5 0.48 33 5.2 0.1 5 23 409 429 403 429 0.79

3 5 1.5e-06 0.00011 22.5 0.6 2 23 436 459 435 459 0.97

4 5 0.00011 0.0074 16.7 2.3 1 23 465 489 465 489 0.96

5 5 3.9e-06 0.00027 21.2 0.2 1 23 495 519 495 519 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.00047	0.032	14.7	0.2	1	23	338	363	338	363	0.97
2	5	0.48	33	5.2	0.1	5	23	409	429	403	429	0.79
3	5	1.5e-06	0.00011	22.5	0.6	2	23	436	459	435	459	0.97
4	5	0.00011	0.0074	16.7	2.3	1	23	465	489	465	489	0.96
5	5	3.9e-06	0.00027	21.2	0.2	1	23	495	519	495	519	0.96

Sequence Information

Coding Sequence: atgcATCTCGAGGATTACCACGGGGGGCGACGCAGCGGCCTCGACGGATGTCGTCAGACCgtgccgacgacgaggaacgaCGACGAGTTCGGAAGGAGCGTCTCGAACGtgccgacgacgccgacgacttCCGGCGCGCAGTTCTGCTGGGACAACGCCGGAAGTCTCTCGCCTCTTCTGCTGAGTCCGTGTACGAGGGACGAGAACGCGGATTGGGACGGTCCGACGGCGAACACCGTCTTCCGGTATCCCGGTCCGGCCTGCCCGGCGACGATGACCAACGGCGAGCGCTCGCCGGGCAGCACCGGAAGCGAGGCCGTCACGCCGAATTCCTGGGTCGGAGGCGTCTTCGCCGGAAGCGAGTACGGCGAATACTCGAACGATGAGGTTTCCGACGGGACTTCGAGACTGAGACTGCCGTCGGTTAATTCGGCCTTCTCGTTCTCGAGGACCTTCTCCAACGTAACGAGCGGCGAGTACGTCGATTACGCGGGCTACCAGGATTACAACGGGGAACGCCAGGATTACGGGGAGTGCGGAGGTTACGGGGACGATCTTCAGCTGGCGCTTCCGGTCGGCGCGCAAGTCAACTCGTCCGTCAGCCTCGAACCGCAGCTCGACGGATCGCTCCAGTTCGTCGATGAATTCGATCTCGGCCTCATACGCGGCGACCCGACGATGCTCCTCGCCAATGCCGGCTCGCCGTCGTCCCTCTCCTCGGCCTACCTCGAGGAGATTCAGGATCCGTTCGTCGGACTCGAGGGACCGTGCTATGCCGTCGGGCATCTCGTCAATGGACAGAATACGAGCGCTTCGCTAGCGGCGTACAAAGGCAACCAGGCGACGGGGAACGGAAACAACGGCAACCAGGTCGTACTGCCCAGGAACGAGGGACTACTGCTCGCGGATGAGAGACGGAAAAATTCTACCGGCGGCGCTGGGAATGATAAGAACGGACACGAGGAGTCCTTTGgctGCAATGTTTCGTCGGAGGACGGATATCACTCGTCTTATCAGTGTCGCTGGAGGGATTGCGGCACGATGTTCGACGAGCAGGAAGGACTCGTTCGTCACATCGAGAAGCGACACatcgaatcgtcgtcgtcgaactcCCACGGACCGGGTCGCAGATCTCAGAGGGACAGGGAAAAGGACAGGGACAAGGAGTCCGGCAACGCGAGCTCCTCGCCGGTCGGCCAGGACGAATTCGCTTGCCTCTGGCAGGGCTGCCCGAGAGCGCGACCCTTCAACGCCAGATACAAACTGCTCATTCACATGCGAGTACACAGCGGCGAGAAACCCAACAAGTGTCCGtttgcaGGATGCAAGAAAGCTTTCTCCCGATTGGAGAATCTGAAGATACATCAGCGATCGCACACCGGCGAACGACCCTACGCGTGCCAGCATCGGGGATGCTCCAAAGCAttcagcaacagcagcgacCGGGCGAAACACCAACGGACCCATTACGACACGAAACCCTACGCGTGCCAAGTGCTGGGCTGCGGCAAGCGTTACACCGATCCCTCGAGTCTTCGCAAGCACGTGAAGAACCACACCGACCCATCGCCGGTAGTTTCGAGCATGGGATCTTCGATGGATATTTCAACCAAACAGCCGGCGAGCAGAGTTCACCTGGTAATCGCGAACGGAGATGCTTATCAGCGAGACCAAAAGACATCGTCCACATCGGTGAATTATCGGCTGTACAAAAACGCCGATTTTATGAGCGAAACGAAAGAAGGCCTTCTCGACGGGGTGCGAAAGACCGAGCGCCTTTCGGATAGTCTCGAGGAGAGTCAACCGGAGTTCGTGCCCTTCGAATCCGTGCAACGATTTATGATCGACGACGAGGCTTATTCGGCGATCGACAGCGAAGTATTttgcggcggcgacgacgacgtcacGGACTTTCAAGAACTCGGCTCGGACATCGAACAGCAATTTCTCGACCTCAGCAACATCGACGAGACGGAATTCATAGGCGGTTGA
Protein Sequence: MHLEDYHGGRRSGLDGCRQTVPTTRNDDEFGRSVSNVPTTPTTSGAQFCWDNAGSLSPLLLSPCTRDENADWDGPTANTVFRYPGPACPATMTNGERSPGSTGSEAVTPNSWVGGVFAGSEYGEYSNDEVSDGTSRLRLPSVNSAFSFSRTFSNVTSGEYVDYAGYQDYNGERQDYGECGGYGDDLQLALPVGAQVNSSVSLEPQLDGSLQFVDEFDLGLIRGDPTMLLANAGSPSSLSSAYLEEIQDPFVGLEGPCYAVGHLVNGQNTSASLAAYKGNQATGNGNNGNQVVLPRNEGLLLADERRKNSTGGAGNDKNGHEESFGCNVSSEDGYHSSYQCRWRDCGTMFDEQEGLVRHIEKRHIESSSSNSHGPGRRSQRDREKDRDKESGNASSSPVGQDEFACLWQGCPRARPFNARYKLLIHMRVHSGEKPNKCPFAGCKKAFSRLENLKIHQRSHTGERPYACQHRGCSKAFSNSSDRAKHQRTHYDTKPYACQVLGCGKRYTDPSSLRKHVKNHTDPSPVVSSMGSSMDISTKQPASRVHLVIANGDAYQRDQKTSSTSVNYRLYKNADFMSETKEGLLDGVRKTERLSDSLEESQPEFVPFESVQRFMIDDEAYSAIDSEVFCGGDDDVTDFQELGSDIEQQFLDLSNIDETEFIGG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00058223;
90% Identity: iTF_00905677;
80% Identity: -