Basic Information

Insect: Amblyteles armatorius
Gene Symbol: -
Assembly: GCA_933228735.2
Location: OW121689.1:12905883-12909631[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.037 2.6 8.7 0.6 3 23 487 509 486 509 0.94

2 10 0.037 2.6 8.7 2.0 1 23 515 539 515 539 0.98

3 10 0.00029 0.02 15.3 0.2 1 23 545 569 545 569 0.95

4 10 0.00083 0.057 13.9 0.3 3 23 577 599 575 599 0.92

5 10 0.0039 0.27 11.8 3.5 1 21 606 628 606 630 0.95

6 10 9.9e-05 0.0069 16.8 0.5 2 23 638 661 637 661 0.96

7 10 0.00021 0.014 15.8 4.0 1 23 667 691 667 691 0.96

8 10 4.8e-05 0.0033 17.8 0.4 1 23 697 721 697 721 0.97

9 10 9.1e-05 0.0063 16.9 1.1 1 23 727 749 727 749 0.99

10 10 5.1e-06 0.00035 20.8 0.3 1 23 841 866 841 866 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.037	2.6	8.7	0.6	3	23	487	509	486	509	0.94
2	10	0.037	2.6	8.7	2.0	1	23	515	539	515	539	0.98
3	10	0.00029	0.02	15.3	0.2	1	23	545	569	545	569	0.95
4	10	0.00083	0.057	13.9	0.3	3	23	577	599	575	599	0.92
5	10	0.0039	0.27	11.8	3.5	1	21	606	628	606	630	0.95
6	10	9.9e-05	0.0069	16.8	0.5	2	23	638	661	637	661	0.96
7	10	0.00021	0.014	15.8	4.0	1	23	667	691	667	691	0.96
8	10	4.8e-05	0.0033	17.8	0.4	1	23	697	721	697	721	0.97
9	10	9.1e-05	0.0063	16.9	1.1	1	23	727	749	727	749	0.99
10	10	5.1e-06	0.00035	20.8	0.3	1	23	841	866	841	866	0.95

Sequence Information

Coding Sequence: ATGTCTCGGAAAGGTGTGACGACGATTTGCAAAACGAAGCAGATACCCCGAATATTTCAACGCCGAAGTCAGTCGATCTGCGGGACCGGACGAGCGGTATGGGACGGCGGCGTTGCCCTCGTCGACGACAACAACATCGATAGCAACGATCAACGCTACGCCGTTAACAGTTCGTCGTTGGATTCGTCCGAGAATTATCGTAAGCGATCGGACGACGAAAAACGCCCCAGACAGCCGGAGAATGGTACGTGCGAGAGCGTCGATTACTCGACGAGAAATTGGAGCAACTGCTGTCAGGCGATCAGCGCCGTCGACGGTGCATCGGTGACGATCGACGGCGAGCCGATCGACAAGAGCGCCGTCGACGCCGCCGAAACCGTCGCCGACATCGAGAAATGGCTGAAAATTCGCACCGAGTCGGTTTCCAGCATGGATCTCGACGCCATGAAGTCGGAGGTCGAGGAGGAGGGCGGAGTGGCGGTGGATCGTTACCTGGCCGACGATCTGCCGCACGCCTTTCTGGGAAAGGACCACGACGCCCTCTCCATAGACATCGATCTCACGGACAAAAAACTGAGCATGGACTACGATCCGATACTACAAGAGCTGAGGAGCGACAAGCTGTTGGAGGCGTGCGAGAAGAACGACGACTTCGTACTGCCCGAGTTTCAACTGGATCACCTCGATCCGATGGCTCTGTCGCCGGTCGACATGATGGTTGCCGGAGAGATACTGCCTTCGACCAGCAACCAGCCGAGCCTGGTCGCCGGCGTTGGCACGGATGAGAATCCTGTATCGCCCGAAATTAATCACGATAAAGACGATCCTGCAGATTCCGAGGCGGCGGAAGTCTCGGAGGAGGCCGCCGTCAAAGGGAGCGCTTACGAACTGAAGGAGGAGATAATCGAGGAGACTGACTTTGCCGAGGAGaatgggaatttttttgtcggagaGATAACGGGTTTCGTTCATCTCACAGATGCAACGGCGTCCGAGCCGGCGACCGAAGCTCGCACGGTTTCAGGTCGCAAGTCGAAGAGTAAATTGGAGCCTAGAATAATGAAGAGGGGTCGCAGGATCGCCGATAAAGCGGATAGCAACGGAATAATCAGAGCGACCGGGGAGGAACGACGTATGGAGGGGAAGGACGGTATAATGGCGGTGGTGGCGATATCCACCGATAAGATCTCGAACATGACGCAAATTGTGATAAACAACGGTAAGGAGGAGCAGATATATCAGGGAAAGACCTCGGAGCTCATCGAGGCGACGGGCAATTTTCCTAAACTCTCGAAGATCGATTCGACCGGGAACTGGAGCAACGGGACTGACTACGGTTCGGACGTTCCTTCGAGCACCCAGAACGAGACTGTTATATCCAACGCTCTGGAGGAATTAGGAATAACCGACGAATGTCTGCAGCCAACTACCGTTAATGATAATGGCAGAACTTGGCTCTGCCCCAGAGACGATTGCAGCAGAGAATTCACCAAGCTTCACGCCCTCAAGGGACACTTGCTGGCCCACTACGGTGTTAGACCTTTCAAGTGCGACTTCGAGGGCTGCGCGTGGGCGTTTCATTCGGAGTTCAAACTGAAGCGTCACAAGGAGACTCATCTGAAGCGCAAGGACTTCGTGTGCGAGGTGCCGGGCTGCAATCGTCGCTTCACGACCGTGTACAATCTCTGGAGTCACGAGAAGTTGCACACGCGACCGAACAGAATAGTTTGCCAGGTGCCTAATTGTCAAGAGAAATTTCAGACTAAGCGCGCCCTCGAGTTGCACATGAAGACTCACGATCAGAGTCACGCTCCCTACGTGTGCAATCACGAAGGTTGCGGCAAGCGTTATTACAGCAGCAACGCTCTGACGTCGCACCAGCGGTGTCACAGCTACAAGGAGATCGACGTCAAATGCTCGTGGGCGGGTTGCGGCAAGGTGTTCGACAAGCCTTGCCGTCTGAAGGCGCACATCCGCTCGCACACCGGATACAAGCCCTACTGCTGCACGTATCAGGACTGCCAGTGGgccttctcgtcgtcgagcaaGCTCAAGAGGCACGAGAAGAAGCacacgaacgagagaaaattcGTCTGCGACGTCGACGGTTGCGGCAAGGCTTTCATGCGCTCGGAGCATCTGAAGGAGCACAGCCTGACCCACAGGGAGGGAAGATACTTTCAGTGTTACATGTGCGACGCTCGTTTCTCGGCGAAGAGCAGTCTCTACGTTCACATAAAGAAGCACCAGGTGAAAGAGGCCGTCGACACCATAACGCGGGGTAGCTCCAAAGTCACCGCGAAACGACGGACCAACGAATCTCGAGTATCGAACGAAAACTTCCCGGCGAAAGTCGCCAGCGGCGAGGATCTCACGAGGATCGAGGAGCTCTACGACGAATCCGCGATTCAGAACGCGTTCGTGGAAGTTCCGTCCGGCGAGGAGTCCCTCGTTACCGCGAGATGTTTCGTACAATCGACCGACGATATTCtgaacgaaatcgacactCGACCGGATTACTACATCTGCGGTGTCGAGGACTGTTCGAAGTCGTACAAAACGCAATCGACGTTGCGATCGCACATGCTGACGGCGCATGGAAATCCTATCGGGGACGGTGATAAATCTTCGATCGGAGCCGGCAGCGTCGCGACGGTGTCGAATATGGATTATATTTTGTACACCACGCCGGGCGCGATGCTCAAAGCGATGAACAACATGGTAATGATAGAGCCTTGCGACGCTATCGTGTCGGGCTCGTCGCCGGAAAACGTCGAGTGCCCGCCCGAGCCCGAACCTCCGCCGATCGATTCTACCTCGAGGCTTTCACAGAGTTCCTATCGCGAGACCGTCGACGATCTgtcgttcgatcaacgagcCAAGAGATGCAATCAGGGCTCGGCGAGAACGGGCTTGACCCGGGCCGACGTTTGGAAATTAAAGACAAACGGTAACGCGACGGAAACGGCAGCGGTCGGCGCGACCGACGTCGTTCTGGGCACGGCTGACCTTACCGAGGGTCTTCTGTTGACCGAGGAACTACCCTCTATGTATTATCAGGACGACATGGTGGGAACCGAGTGTCAAATTCTCCTCCTCGATTCCGGCACGTCCGAGAACACGATACACTTGCGCGGCCTCGAGTGA
Protein Sequence: MSRKGVTTICKTKQIPRIFQRRSQSICGTGRAVWDGGVALVDDNNIDSNDQRYAVNSSSLDSSENYRKRSDDEKRPRQPENGTCESVDYSTRNWSNCCQAISAVDGASVTIDGEPIDKSAVDAAETVADIEKWLKIRTESVSSMDLDAMKSEVEEEGGVAVDRYLADDLPHAFLGKDHDALSIDIDLTDKKLSMDYDPILQELRSDKLLEACEKNDDFVLPEFQLDHLDPMALSPVDMMVAGEILPSTSNQPSLVAGVGTDENPVSPEINHDKDDPADSEAAEVSEEAAVKGSAYELKEEIIEETDFAEENGNFFVGEITGFVHLTDATASEPATEARTVSGRKSKSKLEPRIMKRGRRIADKADSNGIIRATGEERRMEGKDGIMAVVAISTDKISNMTQIVINNGKEEQIYQGKTSELIEATGNFPKLSKIDSTGNWSNGTDYGSDVPSSTQNETVISNALEELGITDECLQPTTVNDNGRTWLCPRDDCSREFTKLHALKGHLLAHYGVRPFKCDFEGCAWAFHSEFKLKRHKETHLKRKDFVCEVPGCNRRFTTVYNLWSHEKLHTRPNRIVCQVPNCQEKFQTKRALELHMKTHDQSHAPYVCNHEGCGKRYYSSNALTSHQRCHSYKEIDVKCSWAGCGKVFDKPCRLKAHIRSHTGYKPYCCTYQDCQWAFSSSSKLKRHEKKHTNERKFVCDVDGCGKAFMRSEHLKEHSLTHREGRYFQCYMCDARFSAKSSLYVHIKKHQVKEAVDTITRGSSKVTAKRRTNESRVSNENFPAKVASGEDLTRIEELYDESAIQNAFVEVPSGEESLVTARCFVQSTDDILNEIDTRPDYYICGVEDCSKSYKTQSTLRSHMLTAHGNPIGDGDKSSIGAGSVATVSNMDYILYTTPGAMLKAMNNMVMIEPCDAIVSGSSPENVECPPEPEPPPIDSTSRLSQSSYRETVDDLSFDQRAKRCNQGSARTGLTRADVWKLKTNGNATETAAVGATDVVLGTADLTEGLLLTEELPSMYYQDDMVGTECQILLLDSGTSENTIHLRGLE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00721488;
90% Identity: iTF_00058174;
80% Identity: -