Basic Information

Insect: Amblyteles armatorius
Gene Symbol: Glis2
Assembly: GCA_933228735.2
Location: OW121686.1:4695436-4698674[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.0053 0.36 11.4 0.2 2 23 169 191 168 191 0.96

2 15 0.00019 0.013 15.9 0.3 2 23 196 218 195 218 0.94

3 15 0.0046 0.32 11.5 0.1 3 23 294 314 293 314 0.97

4 15 1 70 4.2 0.4 2 23 320 342 319 342 0.94

5 15 0.00068 0.047 14.2 0.3 1 20 352 371 352 373 0.92

6 15 1e-05 0.00071 19.9 4.4 1 23 383 405 383 405 0.99

7 15 3.9e-05 0.0027 18.1 0.6 1 23 418 440 418 440 0.98

8 15 3.4e-05 0.0023 18.3 2.1 1 23 448 471 448 471 0.97

9 15 4.2e-05 0.0029 18.0 5.5 1 23 477 499 477 499 0.98

10 15 3.3e-05 0.0023 18.3 0.5 1 23 502 525 502 525 0.96

11 15 0.014 0.96 10.0 3.5 1 23 544 566 544 566 0.96

12 15 2.4e-06 0.00017 21.9 1.6 1 23 572 594 572 594 0.97

13 15 1.3e-07 8.7e-06 25.9 2.5 1 23 599 621 599 621 0.98

14 15 4.4e-05 0.003 17.9 5.7 1 23 629 651 629 651 0.98

15 15 7.3e-05 0.005 17.2 0.9 1 23 657 679 657 679 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.0053	0.36	11.4	0.2	2	23	169	191	168	191	0.96
2	15	0.00019	0.013	15.9	0.3	2	23	196	218	195	218	0.94
3	15	0.0046	0.32	11.5	0.1	3	23	294	314	293	314	0.97
4	15	1	70	4.2	0.4	2	23	320	342	319	342	0.94
5	15	0.00068	0.047	14.2	0.3	1	20	352	371	352	373	0.92
6	15	1e-05	0.00071	19.9	4.4	1	23	383	405	383	405	0.99
7	15	3.9e-05	0.0027	18.1	0.6	1	23	418	440	418	440	0.98
8	15	3.4e-05	0.0023	18.3	2.1	1	23	448	471	448	471	0.97
9	15	4.2e-05	0.0029	18.0	5.5	1	23	477	499	477	499	0.98
10	15	3.3e-05	0.0023	18.3	0.5	1	23	502	525	502	525	0.96
11	15	0.014	0.96	10.0	3.5	1	23	544	566	544	566	0.96
12	15	2.4e-06	0.00017	21.9	1.6	1	23	572	594	572	594	0.97
13	15	1.3e-07	8.7e-06	25.9	2.5	1	23	599	621	599	621	0.98
14	15	4.4e-05	0.003	17.9	5.7	1	23	629	651	629	651	0.98
15	15	7.3e-05	0.005	17.2	0.9	1	23	657	679	657	679	0.98

Sequence Information

Coding Sequence: atgaatacatcTGTAGCCGTCAGCAAGATCGAGAGATCCAACGATCGTCGAAGTTCGACTGCGAGGGCGATGGATGTCCAGGAGGAGAATACAGCAGAACAAACCTACCGCACGCTAGTTATCGCAGGAGAGCAGGATACTTGCCGATTGTGCGGAAACACTGGTTCCGACTACACACCAATTTTTGACAATGACGACTTGTTCATTGCGGAAAAAATTGGTAGATGTCTACCGATTGTTgTATTATCAAGCGACGATTTACCGTCGCACGTTTGCCCGAATTGTCTTGAAAGTCTAAACGTGAGCTACGAGCTCATCCTTACGTCGGTAAAAATCGATTCTCAATTGAGGCACCGACTCGCCGAATTCAATGAGAAGGGCGATGCCGCTGACCCGACGAATGATTCCGAGGACACCAAGCTATCGGACAAATTGAATCCCGACGATACTCTCGTCACGTGCACAGAGAGACTGCTGAATACCGAAGCGATATATGGTCCAATGGAGTGCGAAatgtgtttgaaaaaattcgtggACATGAATGATTTCGATCGGCACATAGAGACCGAACATTTGTTGGCCTGGCCGTGCAGTCTGTGCGACAAGAGTTTCGAGACTTCTGTGAAACTGATCTCTCACAAGGAGAAAATGCACGCCGGAAATGTTCTAATTTGCAGTCGCTGCGTCGACGATGAAAGATCGGCGCACGGTTTGACTTCGCTAGCGGAAATGCAAGACGGTCGTAGGCAAATAACTCGAGTAAAGCGTGTCAGGACGAGAgggcggaaaaaaatcaatgaggCACATCAACGTAGCGCGAGTAACGAGAAGATCGAAGAGCCGGAAGAAGAGAAGACCGACGCGAAACCGGTAGCGATGTGCGATATATGCAAAATAGATTTCGGCTCTGACGAACTTTTAACGGCTCATCGACGAatacacgagaaaaaaattcttcaatgCTACTTATGTCAGACCGATGCCTCGTCGATTTACGAACTTTACAATCACAAACGCGAAACTCACAACGTTTATAAGAAGGTTCAATTGAAATTCATTTGCGACACTTGCGGAAAGTTTTTCTCGAACAACTGGCAGTGGCTCGAACATCGAGAGAAAACCTCATGCAAGAGAACATTGTCCACTTACACTTGCAAATATTGCAACAATGATTTCACGACGAATTTTAAACTCACGAGACACTTGAGAACTCACAAAGACGAAATGCTGAAAGATCCTTCCGCGACGATTTATCGATGCGTCGGATGCCCGAAAATATTCGTCGACAAGGAGTTCTACCAGAAACATCGCAACGTACACGATCCCGAGTGTTGGGACAAATTCAAATGCGAAAAGTGCAGCAGATCGTTCAGAGATCAAATGCGGTTGCGTGAGCATCAGCAGTCTGTTCACGACGGTTTTAAGCCGCATCAGTGCGATGTTTGCGGCAGAACATTTCATCGATTGTCGAATATGCGAGTCCATCGGAAGAAGCATTTCGGTTACAAGTGCGAGCACTGcgacgaaattttcgagcaGCTGCGAACACTGACGGATCACATAAACGCCGTACACGAAGTGGAACCGAGTCCCAAGCGCGTACCGAAAAAGCCGCAAACCAACGAATGCTTCGTTTGCAGATATTGCGGACGAAAATTGACCACCCATCAGTCTCTGCTGGATCACGAGCACATTCATACAGGCGAAAAGCCACATTCCTGCAAGATATGCGGAAAATCTTTCAGAAGTTTGTCAGCGAGGTGGGCTCACATGCAGCGTCACGTTAAAGGAACTTATATTTGCGAGCACTGCGGGAAGTCCTTCAGCTACAAACAGAATCTGACGACGCACTTGCAAGTGCACGCACCTGTAGAGAGTCGGAAGCATCGGTGTTCCAAGTGTGGAAAATTGtttcttcgaaaatctcatctcAAAGTTCACATGCGAATACACGACGGTGTGCGACCGTACACGTGTGACATATGCCAATTCAGTTTCACGCAGATTGGCGATATGAAACGTCATCGGGCGCGTCACGCAAACGGTGAAATTCGTGTGAGACAGCCGCGAACCAAGGCTAGCACAGCTTCCGGTAGTGAAGCAGATGGAAGTTAG
Protein Sequence: MNTSVAVSKIERSNDRRSSTARAMDVQEENTAEQTYRTLVIAGEQDTCRLCGNTGSDYTPIFDNDDLFIAEKIGRCLPIVVLSSDDLPSHVCPNCLESLNVSYELILTSVKIDSQLRHRLAEFNEKGDAADPTNDSEDTKLSDKLNPDDTLVTCTERLLNTEAIYGPMECEMCLKKFVDMNDFDRHIETEHLLAWPCSLCDKSFETSVKLISHKEKMHAGNVLICSRCVDDERSAHGLTSLAEMQDGRRQITRVKRVRTRGRKKINEAHQRSASNEKIEEPEEEKTDAKPVAMCDICKIDFGSDELLTAHRRIHEKKILQCYLCQTDASSIYELYNHKRETHNVYKKVQLKFICDTCGKFFSNNWQWLEHREKTSCKRTLSTYTCKYCNNDFTTNFKLTRHLRTHKDEMLKDPSATIYRCVGCPKIFVDKEFYQKHRNVHDPECWDKFKCEKCSRSFRDQMRLREHQQSVHDGFKPHQCDVCGRTFHRLSNMRVHRKKHFGYKCEHCDEIFEQLRTLTDHINAVHEVEPSPKRVPKKPQTNECFVCRYCGRKLTTHQSLLDHEHIHTGEKPHSCKICGKSFRSLSARWAHMQRHVKGTYICEHCGKSFSYKQNLTTHLQVHAPVESRKHRCSKCGKLFLRKSHLKVHMRIHDGVRPYTCDICQFSFTQIGDMKRHRARHANGEIRVRQPRTKASTASGSEADGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00905579;
90% Identity: iTF_01364841;
80% Identity: -