Aarm001704.1
Basic Information
- Insect
- Amblyteles armatorius
- Gene Symbol
- -
- Assembly
- GCA_933228735.2
- Location
- OW121686.1:1842708-1843076[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.7e-09 4.6e-06 26.2 0.0 5 34 1 31 1 42 0.83
Sequence Information
- Coding Sequence
- ATGAACGATGCTCTGAAGGCTGTGAGGAATGATGGAATATCCGTACGTGCTGCAAGTAAAAAATATGGTGTGCCGAGTTTATCCACTCTCTTGGATAAACTCAGTGGCAAAGCACCAGAGAAACGTAAAATGGGCCCCAGTTCGATTTTGACGACAAGCGAAGATCAACTAGTCAATTGGATTAATCACCTGGGAAAGACTGGATTCCCAGTAACAAAAAATCAGCTGCTGGACAGCGTGAAGCACTTAATCAACAGTCTCGAAAAGGAAACGCCTTTTACGGACAACAGACCGGGACGACATTGGTACGAAGCCTTTCTGAAGCGCTATCCCGATATTTCGATAAGAACTCCTCAAAACTTGACTTGA
- Protein Sequence
- MNDALKAVRNDGISVRAASKKYGVPSLSTLLDKLSGKAPEKRKMGPSSILTTSEDQLVNWINHLGKTGFPVTKNQLLDSVKHLINSLEKETPFTDNRPGRHWYEAFLKRYPDISIRTPQNLT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00721174; iTF_00397988; iTF_00059372;
- 90% Identity
- iTF_00721174;
- 80% Identity
- -