Aarm006445.1
Basic Information
- Insect
- Amblyteles armatorius
- Gene Symbol
- bab1
- Assembly
- GCA_933228735.2
- Location
- OW121688.1:21719894-21721556[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.7e-10 2.7e-07 30.2 0.0 1 39 339 378 339 383 0.88
Sequence Information
- Coding Sequence
- ATGGAAGCCTCGGAGGAGTTTTGTCTTCGATGGAATAATCATCAGCAAAATTTGCGCACGACAATGGCCGAGCAGTACAAAAatcagatattcacggacgtTACACTAGGAGTTGAGGACGGTCTTTCGATTCAATGTCACAAGATGATATTGGCTGCAAGCTCGCGGTATTTTCAATCGATCTTGATTGATTTTCCGTACGAGCATCCGATCGTCGTTCTCAACGACGTCAAGTATAAGGAAATTATGGCGATACTGGAGTACATGTACAAGGGCGAGGTAAACGTTCCGGGGAATGAATTACCAGCTTTGTTCAAGGTTGCCGAAGCTCTGGAAATCAAGGGTTTGGTAGGTGAAAATAAAGAGTCCCCGCAACGGGAAGTTGACAATCGCAGCGTCGTTAATACTACCGAGGTTTGCGAAAGTGTTAAAATTCACGAAGAACGAGCTTCGCCTCCAAGTTCGGCAAGCTCACCTCATTGGTTGACCGGAAAATCTCGAGTTATGAACGAACACGAAAGGGCAAAGCTTTCCCCGTCTGCATGGTCCGCGTTCTCCCAGGGACTTATTCCCAAAGGTCAAAACAGTCCGATAGCAGCTGCGGCCTTGCAGTCGTCGCCCCTTCTCGGACCCCATGGCGACAACGGTACGGAACTTTTTCCGCGCCGGAgacgagggagaaaaatttcgagcAACAGTAAAACGATTAATCGGGGCAACCCGATACTGAGAACGGCTCTCGATCAGGGTCAAGTCGGTGGCTCCCGACAAGTACCGCTCATTCGTAACGATTCTCATTATCGAATGGCCAGTAACGTCGCGGTGAGCAACGATTACGCGATCGACTCTCATCCGCCTCGCAGTCCTGACGAGAGTGAAACTTGGATGGTTGGCGGGGATGACAACAGAGTCTCTCGACTATCTTCTTCCGAAGAGACAAGCGCAGGTAACGGTAACTGTGCAAGTATTACATTGGCAAGTAAACCCGGAACCGCTAAGCGTTACAAGCAGTACACCCATACGGACATAGCGGGAGCTATCGCGGCTGTTCTCGAGAATGGCATGAGCGCCAACAAAGCCGCAGTCATGTTCAGAGTACCCTCGAGAACTCTGTACGACAAAATAAGCAGAGttaagaaggaagaagaactGAGGAACGGGGGTGGAGCTGGAATATCGAAACGAAAGTGCAGCGCGAGCAGCAGTGGTGCGTGTTTTCCATACGGTATACTAGGGGCCAACGCTACCGGCAGCATTTATGGAAATTATTCGGATACATTACCGATGGACGATCCGGCATCGGTTCTGGAGACTACGTTCGCCGAGAGCCGCGACAATTATATCGACCATAATGCCAAGGTTAACGTTAACGTCAACATTGACGGAAAAAGTCCGAGTCCGAGTCCGGATCCTCGACTTCCGATACATGCTCAGGTATCGCATCGTGAGGAGAGCGATAACGAAGCCGAGGATCTCTCGGTAAGGACATCTCGTAAATCGGACGTTGGCGTTATTATGCCAACGAGAATTGTCATCAAAGAGGCTACTTGA
- Protein Sequence
- MEASEEFCLRWNNHQQNLRTTMAEQYKNQIFTDVTLGVEDGLSIQCHKMILAASSRYFQSILIDFPYEHPIVVLNDVKYKEIMAILEYMYKGEVNVPGNELPALFKVAEALEIKGLVGENKESPQREVDNRSVVNTTEVCESVKIHEERASPPSSASSPHWLTGKSRVMNEHERAKLSPSAWSAFSQGLIPKGQNSPIAAAALQSSPLLGPHGDNGTELFPRRRRGRKISSNSKTINRGNPILRTALDQGQVGGSRQVPLIRNDSHYRMASNVAVSNDYAIDSHPPRSPDESETWMVGGDDNRVSRLSSSEETSAGNGNCASITLASKPGTAKRYKQYTHTDIAGAIAAVLENGMSANKAAVMFRVPSRTLYDKISRVKKEEELRNGGGAGISKRKCSASSSGACFPYGILGANATGSIYGNYSDTLPMDDPASVLETTFAESRDNYIDHNAKVNVNVNIDGKSPSPSPDPRLPIHAQVSHREESDNEAEDLSVRTSRKSDVGVIMPTRIVIKEAT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00059579;
- 90% Identity
- iTF_00721178;
- 80% Identity
- iTF_00059579;