Aarm004623.1
Basic Information
- Insect
- Amblyteles armatorius
- Gene Symbol
- -
- Assembly
- GCA_933228735.2
- Location
- OW121687.1:20649739-20651555[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.7e-11 8.6e-08 31.8 0.0 3 38 17 52 15 56 0.91
Sequence Information
- Coding Sequence
- ATGGTTCGGCGATATGTGCGAAAAACAACGCGCGGTTGTTGGGACGAGAGAAAGATGGTCGCGGCTATGGACGCTATACAGTCCGGCAAAATGGGTTACCTGCAATCGGCGAAGAAGCACGGAGTTCCGAAATCGACGCTGAGaaggataatgaaaaaattacaggaCCACGGCGAGGTGAACATCAGATGCCCATTGGGCTCGAAAGCTTCGATATTCACggccgaggaggagaaggactTGGTAGAATATCTGATAACCATAGAGAGCCGTTTGTTCGGTCTCACTAATATAATTCGTCGAAGATTGGCCTTCGAACTGGCGACCCTCAAAGGCAAGGCGAACAAGTGGAAGGACAACATAGCCGGTAGAGAATGGTTTCGGGATTTCATGAGGAGGCACGACGAATTGACGCCGAAGCCGCACGAGAAATCGTCTGCACCGAAAGTCGTGGGTTTCAACAGACCCGCGGTTATGAAATTTTACGAGGCCCTCGGCGATCTGTATAACAAGTATCAAATGACTCCCGATCGAATTTACAACTGCGACGAAACGTCGATAACCTGCGATCAGAAGACCGAGGGAAAGATAATGTCGTTGAAGGGCCAACCACAGACCGGAGTCACGACATCGACGGAAATCGGTCAGACGATCACGGTCGAGGTCTGCATGAGCGCGACCGGTGTGTTCATACCGCTGCTGTTCATCTTTCCCCGTTCGACCCTCGACCCCCAATTCACGAGCCACCTCATACTGCCCTGCTACACCCGGTGCCACGACTCGGGTTGGATGGACGCAGAAATATTCGTCTGGTGGCTGAGTCACTTCGTGAAATTCTCACGAGCCACCAAAGAGCATCCCGTTCTGTTGCTGATGGACGGCGACACGAGCCACACGATGAACATCGCCCTCCTCGAGCTGGCGCGCGAGAACGGCGTTATAATGCTCTGCCTGCCCGCCCACTGCACCCACAAGCTTCAACCACTGGAAGTGGAATTCTTTCCGCCGTTGAGCAAACACTACGGCTCGGCTGTGAGAAACTGGCTGGCTACGAATCCTGGACAGTCGCTGACGATCTATCAGATTCCAATGCTCTTCGAGCAGGCCTTCATTCAGACGGCGACGATGGCGACGGCTCTGGTCGCCTTCAGAAAAACCGGGGTGTGGCCCTTCAATCCGCACAATTTCAGCGATCAAGACTTCGTCGGTGCAACGACGAATTATCTTCCTCAGCAAGGCGCCGTTCCAATCGCGCCGCAACACTGTCCAACGAATAATCTTAAAGAACCCGCGATTCCTGCTTGGAAGCCTCCGATCCATTCTGGGAACGAAATGAGGACCGCAGCCTCTTCGGCCTTTGTCGAAGCTGTGCTCGGTGAGCCACAAAATTATCCGCCGAGAAAGCGGCCGGTACCGAGCGCTATACCGTTAGGGGGACAAAGCTATGCGTCTCACAGTATGGAACCAACGATTCCCGGGCCCTCGTGGAAGCCCCACATGAATTCCGTCAACGAGATGAGACTGTCCACGTCATCGGCGTACGTGGAGGCAGTACTCGGCGGACCGCAAAATCATCCGGCAAGAAACATGGAGGAACCGCAAGTTCCGGGACCCTCCTCGGAGCCTGCGATTTACAACATGATACCGCATATGTTTCTATGA
- Protein Sequence
- MVRRYVRKTTRGCWDERKMVAAMDAIQSGKMGYLQSAKKHGVPKSTLRRIMKKLQDHGEVNIRCPLGSKASIFTAEEEKDLVEYLITIESRLFGLTNIIRRRLAFELATLKGKANKWKDNIAGREWFRDFMRRHDELTPKPHEKSSAPKVVGFNRPAVMKFYEALGDLYNKYQMTPDRIYNCDETSITCDQKTEGKIMSLKGQPQTGVTTSTEIGQTITVEVCMSATGVFIPLLFIFPRSTLDPQFTSHLILPCYTRCHDSGWMDAEIFVWWLSHFVKFSRATKEHPVLLLMDGDTSHTMNIALLELARENGVIMLCLPAHCTHKLQPLEVEFFPPLSKHYGSAVRNWLATNPGQSLTIYQIPMLFEQAFIQTATMATALVAFRKTGVWPFNPHNFSDQDFVGATTNYLPQQGAVPIAPQHCPTNNLKEPAIPAWKPPIHSGNEMRTAASSAFVEAVLGEPQNYPPRKRPVPSAIPLGGQSYASHSMEPTIPGPSWKPHMNSVNEMRLSTSSAYVEAVLGGPQNHPARNMEEPQVPGPSSEPAIYNMIPHMFL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00397997;
- 90% Identity
- iTF_00058610; iTF_01364562; iTF_00721177; iTF_00057850; iTF_00905343;
- 80% Identity
- -