Aarm006444.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Amblyteles armatorius
Gene Symbol
lola
Assembly
GCA_933228735.2
Location
OW121688.1:21701211-21708189[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.6e-11 1.6e-08 34.1 0.0 2 45 364 407 363 407 0.94

Sequence Information

Coding Sequence
atggCCAACCTCGAACAGCACTACCGTCTACGCTGGAACAATCATCAAGCGAACCTTATCGAGGCTTTCGATCAGCTCCTGATAAACGAAGAATTCGCCGACGTTACATTGGGCGGTGAAGATGGAGCACACATAAAATGTCACAGGATGGTCCTAGCTGCATGTTCAACGTATTTCAAGACCTTGTTCATGGATCTTGGCCACACGCATCCGGTGGTCGTACTCAAGGACGTGAAGTGCAAAGAGATAAAAGCAATATTGGAATACATGTACACGGGTGAGGTAAAAGTCGTGCAGGAGGAATTGGCAGCATTGCTCAAGGTCGCCGAGCTTTTGAAGGTGAAGGGTCTCGTCGCGACGGACGAATCAAGCTCTTCCCTCTTGGAAGACAGAAGACACGAAGAAAGAATAAGCACCAGTACCAGCAGCAATGCTGCCAACAGTTCGGAAGGTGCAGCGGGCGGCGGACCCGGCAGAGGTCACACTTCCCCTCCTCACTCGACAAGCTCACCGTACTACGGCTACGGCGGACAATCACCCAACGGCCAAGCTCATCCGGCGGATTATCAGACACCGTTGTGGGCAGCCCGACAGAGTCTCGCTCTGGCTGAACAAAATTCGGCGATCGCCGCGGCGGCTCTTCAATCGTCGATATCGGCTAAACACGCGTCGCTCTTCGCCTCTCACTGGGACAACAATGGGCCCGATGCTTCGACTCCGCACGGTaataggaaaagaaaaatctcaacCGGCAATATTATGATGAGAAACAACGACACACCGATCCTGAGAACGGTTCTTGGTCAAGGTCATGCCGATAGTTCTCAGCCAATAGCCATTCTTCATCCCGATATTACTCATTATCGAACGACTCACAGCAATGGATCGGCCAACAACGAGACCGATGATAAACGTATCGCCATCGATCCATCTAATTGTCACTCGTCGCAGAATTCATGCGCCGGTGAAGTCTCCCTCGCGGAGGAAGACGACAAGAAACACAAGAGTTTCTTTGACGATTCGAAAGCAGgAATAGCCAATTACGTACCGACCCAAAAACCCGAATGGAAGCGTTACAAGCAGTACACAAGAAAGGACATCGAGGATGCTATAAATGCCGTGAAAGACGGCACTAGCGCACTGCAAGCAGCTCGCAAATTTGGCGTCCCATCGAGGACTCTCTACGACAAAGTCAAGAAGCTCGGGATCACTACATCGAGACCGTTCAAGCGTGGCTCGAATGGCAGCAGCGCCTGTTTCCCATTCGGTTTAGGTGGTAACGTTAACGGGAGAATTTACGACAATGAGAACAGCGGCGGTCTACCGATTGACAATTCATCGGCGGTACTCTCGGAGACCGCCTTCTCGGAGAGTCGAGACGACTCGAATGACGACCGTGAGGCAATGATGGACGTTACTCAAACTGGCTCTCAGCCTCAACTTGACTATTTTCCACCAATCCCACACcagcaatcgcaatcgcaatcgcaatcgcaatcgcaattaCAATCACCGGCGCAGGAAAGCAATAACGAGGTCGAGGATCTCTCGATTTCCAACTACTTGCTGTTGATATGCTTGACAGGGGTGAGCGTCTCGCTCACCTCGGTGGAAGAGGCAAACACCACTTCGGCAGAGAGCGGTATACCCTGTCCCACGGAATGCATATGTCTATCGTCCAAGCAGGCTTTGTGCAACACCGGAGGCCTGCAGGACATACCGACGTCGCAGCTGACCCCCGCCGTCGAGGAATTGTCACTGACAAAGAACAACTTTACTATTATAAAATCCGACGCTTTCGCGGGTCTTCGACATCTTCGTAAGTTGAGTCTCGACGGTAACAACATATCAACGATAAAGCCATTCGCCTTTCGCGGTTTGAACAAGTTAACCGATATATCGATACAACAGACACCGCTCGGTTACATCGGCCAATTTTCGTTCGCCACCTTGCAGAACGTGACGTCTCTGTTACTCGCGAATAATCGTATAAGTTACATCGAGTCATTCTCGTTCGCGGGAACGAGTAACGTAAAGTTGATACTTCTGAGCAATAATCCCCTGATAACAGTGCAGAGCAAAGCTTTCTCGGGTCTTACGAACGTCGAGCACCTTATATTTCCTTCGGGTGTTCGGGTTATCGAGAGCGATGCCTTCAATGGACTTCAGAACGTCGGACAGATAAAGCTAACCTTCATGGATCTTACCAGTCTACGAGCGTACACTTTCAGGGGACTCACTCATATTCAGAGACTAAACATACAAGAGAGCGATCTCGGTGCGATGAGAGCCGAAGCTTTCGCCGGTCTCGCTCATGTCGACAGTCTCAACATACTTAACAACAAGATTGACGTTATAGACCAACTACGCTTGACGACCGAAAACTCGGTCGGTATATTTAGATTCAACGGTAATCATGTTCTCGCAGCACCACGCGCAAAAGAAACTTTTCTTCAAGTAAACACGATAGTCGCGATCAACAATCATTTTCCCTGTGACTGTCAGATACACGAAGTTATCGAAGGTCATCTCGCTAACGGTTCCGTCGATGAGTTTCGTCAACGCAATTATTGCATATCACCGATCGAGTACAACGGGAAACAGATGAATCTCGTCGACTTCGACCTTATAGCCAGATGTCACGACAAAGTCGTGCAGGACAATCTTGGCTCGGGTGTCGTCGAACCGTccatttccaatatttttctcgcctTCCCAATTCTTTCCTCGATAACTCCCACTATAATCGCTTCGCTTTCAACATGA
Protein Sequence
MANLEQHYRLRWNNHQANLIEAFDQLLINEEFADVTLGGEDGAHIKCHRMVLAACSTYFKTLFMDLGHTHPVVVLKDVKCKEIKAILEYMYTGEVKVVQEELAALLKVAELLKVKGLVATDESSSSLLEDRRHEERISTSTSSNAANSSEGAAGGGPGRGHTSPPHSTSSPYYGYGGQSPNGQAHPADYQTPLWAARQSLALAEQNSAIAAAALQSSISAKHASLFASHWDNNGPDASTPHGNRKRKISTGNIMMRNNDTPILRTVLGQGHADSSQPIAILHPDITHYRTTHSNGSANNETDDKRIAIDPSNCHSSQNSCAGEVSLAEEDDKKHKSFFDDSKAGIANYVPTQKPEWKRYKQYTRKDIEDAINAVKDGTSALQAARKFGVPSRTLYDKVKKLGITTSRPFKRGSNGSSACFPFGLGGNVNGRIYDNENSGGLPIDNSSAVLSETAFSESRDDSNDDREAMMDVTQTGSQPQLDYFPPIPHQQSQSQSQSQSQLQSPAQESNNEVEDLSISNYLLLICLTGVSVSLTSVEEANTTSAESGIPCPTECICLSSKQALCNTGGLQDIPTSQLTPAVEELSLTKNNFTIIKSDAFAGLRHLRKLSLDGNNISTIKPFAFRGLNKLTDISIQQTPLGYIGQFSFATLQNVTSLLLANNRISYIESFSFAGTSNVKLILLSNNPLITVQSKAFSGLTNVEHLIFPSGVRVIESDAFNGLQNVGQIKLTFMDLTSLRAYTFRGLTHIQRLNIQESDLGAMRAEAFAGLAHVDSLNILNNKIDVIDQLRLTTENSVGIFRFNGNHVLAAPRAKETFLQVNTIVAINNHFPCDCQIHEVIEGHLANGSVDEFRQRNYCISPIEYNGKQMNLVDFDLIARCHDKVVQDNLGSGVVEPSISNIFLAFPILSSITPTIIASLST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00059565; iTF_00397436; iTF_00397201;
90% Identity
iTF_00059565;
80% Identity
iTF_00059565;