Basic Information

Gene Symbol
JARID2
Assembly
GCA_933228735.2
Location
OW121693.1:12475617-12483385[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.2 5.7e+03 -2.2 0.1 53 83 155 185 144 186 0.72
2 2 9.2e-23 1.6e-19 70.0 0.0 6 89 1324 1405 1320 1405 0.94

Sequence Information

Coding Sequence
ATGGTATTGGGCCGAAATGACAAGAGAAAAAGGAAGGAGGGCGATCTCGTGGATCTCATGGATCCACTCTCCGAGTCACCTAAgagAACTAAGGTCCATGCCCAGAGAAAGTTTGCTCAGGGAGCGGCGACCGTGTTCAGTCCGGCGCCGACTATGGTCAAGGAAAAGGAGAAAACTAAACCTGCTGTTATAACCGAACTCATAACGCACAAACGACCCAATACCGAAGACTTCCTCACATTCCTGTGCTTCAGAGGTACTTCGATACTGCCGCCGAGTTTGAATTTCTTCAACGTCGGAAGTAAGAAAGAGAAGAGCGAAGGGAAGGTTTCGTCATGTACGAAGAGCAACAGCAGATCGTCATCCTCGGCGTCGGTGCCGTCGACCGCGATATCGAAGGCGGACTCGACTTCGAATTCGCAGAGCAAGGTCGGCGCGAAGGGCGCGACGACTGCGAAGAAGAAAGTTCCACCGTCCGTGGCCCAAAAGCCGCCCCTGAGCAAATACAAGACCGCGACCTCGACGGTTCAGGCCCTGAAGAAAAAGTACCAGGAGCAACGTCTAGCGAAGCAGCGAATAAGAAACAAATTCAAAGCTTCGTGCGTGATGAGAACGCGCTCATCCACCGAGCGGGTCGTTCTCAAGTCCGTCGCGAAACTCGCGCCTCGGAAATTCCTCGCCCGCAACGAGACGAAGAAGCGGCACGGTTTGCGCAGCGGCGCCCTGTCCGagaaggtaataaaaaaatcgagcgtaCCGCAGCCGAAGGGAAGGCCGATCGGCTCGAAGCCGAAGAAGAGACTCGTCGCGAAGGAGCAAACGAGCGAGTCCTCCGAATCGGAGAGCGCCACGTCGGACGACGAAGCAACGACTTCGAAAAATACTCCCCAGCTAAAACGCTCCGGCAAGGCGATCCAGAAGAAAATCTGCACGCGGAGCAAATCCGAGATGAGACGAATAACGCGCTCGCAGCGAGAGAGCGCACCGTCGGGTCAGTCGGGAATGTCGCGGAGACCGTCGAGAAAGACCAAGGAAGCGGCGGCCGTTTACATGGAAATTCTGGGACGAAAGTTGGTGAGTCCCGACATCGAGAACGACGACAATCTCTCGGTGGACAGCTTTCCCGAACTGCCGAACGCCCGACGGACCGCCCAGGCCGAGAGCGAGATAAAGGCGAAGTCCAAGCAAGCGAGCAAGAACCGAGAGACCAAGGACAAGGAATCTAAGGATACGAAGGAATCGAATGCCAAGTCGAAACCCAAAGTCGAGAAGCCTATCTTGAAAAGCAGTAAAAGAACGCTCAGGGTGCGAAGGTACTGCGAGCTGGACAGCGAGGACGAGTCGGAAACCTCGGTCGAGCCTGACAAAACGAGGCACGTGACCAGGCGCAGCGTCGGCAAGACCGAAAAACCAGCGACCCGAAGTCTCCGATCGTCCTCGCGCAACCAACCCGCGAAGAGCGAAGTCTCCTCTCCGGCCAAAGTTCCgaaggagaaggaaaaaatcgCTACCGCGAAACGACCGAAGCCTCCGACGAAGAAACCCGAGAGCGACGAGTCCGAGGAGGAATCGTTGGGAACTTTGCTCGACaagttgaaaaagaaaaaggaggaaaaatccGAGCCTCGAAAATCGGCGACACAAGTCGAAGCTCCGGCTATCGAGGTCGCTCCTGAGCAACCGGAGTGCCCCGAGCAATCCGAGAATCCCACTCCCTCCCAGGtctccgacgacgaggaatcgTTTCGCGGTTTCACGAAGAAAGCGATATCGAAGGTCCTTAGTTCGTGCAACAGCCACGTAAACGCGAATCTCCTCGCCTCGGAGGAGGCTTACGGAAAGCTGGAAGCGCCTAAATCCCAAGAAGCGCCGAAGCTCGAGGTTTCTCGCGAAGCGAAACACTCTCCAGCGGACGAGAAACCCGAGCCAGCGACGAGCCTTCACGAGGTCAAAACTCCGGTCTTCACGATCGTGAAGCCCGTACAGGAATCTACTTTGCTCACTCGAAAGCTCGTGATCGCCGATCCGGAGGAGGTTCCCGAACCGGAGAACAAATGCAACCACGTAGCCGAGAGTTCCCCGATGAACATAATCGACATGCCGCTCATGGGAATTCACGGTCGCAAGGCTCGCGTCAACATGTCGACGGAGCAGATAGAGAAGTGGCTGAACGAGAGTTCGATGGCGAGGGCGAAGCAGCGAAAGCAACCCGACGAGCCCTCCCAGAATTTTCCATTCGAGGTACCCGAAAAGGTGCCGAAGCCGGACATGAATCACCTGTCGATTCCCACGAGGATTCAGCACCTGGTCAGGCCGGTGAACGTGACGATAGCGAAGCTGGCCGAGAAGAACGGAGCGCGCGATCGAATGGGACTGGCGAGCAGAATCGCCCCGACCTTCGTCACCGGAGCGAGAATTCCTCTCGCCAAGCCCCTCAACGTACCGACGCCGAACAGAAACAAGATAAACGCGGACATAAAGGAGATCATAAAAGGAAGAAGCGCGACGAAGGCGACGAAGGAGACCTCGACCGGCGAGGAGAGCGACACCGTCTCCAAATCCGACCAGAACTCCGTCGACGGGTCGCCGGACAAGAAGTCAACGCCGGAGAAGAAAGGAATCTTTCAGCAGAGGAAAACTTTTCTGCCGAGGGTGAAGGAGAGAAAAACAGCGACGCCTAACGCGAACGCATTTTCGCCGGAGAACGAGAGCAGCGTCTACGCCTTCGAGAGCGACACCGAGGTCCCGATTAACACGCCGTTCAGGAGAAAGCTGAAGGAACTGGGACACAAGTGCGGAGCGCCTTCGGAGCCGGACACTTCGAGGACGGGCGAGGACTCGAAGTTCAGCGAGCTCGGCACGAGCAGCGAGACGGACGGCAAGAGTTCGTCGAACAAGTTCGCCATGCCGAAGAGTTTCGGGAATTTGTCGAATGTTCAGGTGTTGCCGTTGGGCAAAATGCCGACGGAATGGGGTGGGGTTAATTGCAGCGCGTCGATAGCCGTTCAGGTGAACTTCGACGAGCAGCAGCGCGGATTGGAGGAAAGTTCGATGGTCCAGGAGAGCGAGGATCCCCAGCAGAAGTGCACGGAGATTTCGACCCAGACGGAGAACACGAACGACAACGAGGACGACAATGATGGGGGGCACGTTTTTTATATTCCGCTCCAGACCGTCACGAGGAACGGTCCGAATCTCGTTCAGGGTCAGCAGCTTATTCAGGGGGTGGCCGTGAAGCTCGGCACTGAAGGGCCGAACGGGCCGAATCAGAGAGTCTTGCTGCGAGCTCAGCTCGTGACGAAACCGCCGTTGGCTGTTGCTCGATGCCCCCCGGTCGGAACCGTTCAGCCGACGACGAGAACTCCGCCGAACTCGACGAGCAGCACTTCCGTGCTGGACCATCCGTACGCGGTCGTGGATCCTCCCGTGGCTTCCACTTCGGCCTTGCCCGTTCCGGTCGTCGCTCCGGTGCAGGCGAGTGCGGATTTCCAGCCACCGCAGCCGCAGCCACCTCTCGGCAGGGCGGCGGCGAATCTGAGCACCAAACAGGGAACGTCCGGGTCGAATGCCAGCGCGGAGAAAGTTACCAAGTCACCGAAAgcggcgagggagagaaaagcGTCGGTGGACTCGACGAAGACCGGCAAAAGAGCTTCGGCGAAATCGCGAGCGAAAGCCGCGGAGGTTTTGTCGCCGAGCAACACGACGGCGTTCCCGGGCTCGGCGAACAGCAACGCCGAGGCTCGACTCGTCGAGGCACCGACGTTTCATCCGACCGAGAAAGATTTTCAAGATCCGCTGGAGTACATCGACAAGATCAGACCGATCGCCGAGAAATTTGGTATTTGCAGGGTCGTGCCGCCTGCGAATTTCAAGCCGGAGTGCAAGGTGTCGGACGACATGCGCTTCACTGCCTACAATCAGTACGTTCATCGAATGCTTCACCGCTGGGGACCGAACGTCAAGGAGATGATGGCTATAAAGAAATATCTCGCGACGCAGAGCATCACGCTGACTCATCCAccatggatcggAGGTATGGAAGTCGATCTGCCACACTTGTACCAAACTGTACAGAGTCTCGGCGGTCTGAAGGAAGtaatcgagaagaaaaagtgGCAGAAAGTCGCTGACGGTATGAAGATACCAAAATCGGCCCAGGACCGCGTAACGAAACTCGACGATATTTACTGCAAATATTTGCTACCCTACGACACTCTATCGCCAGAGGAACGGGGAAAGTTGTTCGACGATGTCGAAGAAGATTGGAAGATAAGAGAGACGAAGACTCTACAGAGGCTCGACGCTCAGTCGAACGACAacgatgaggaggacgatgacgaTAGTTCCGACGAAATCGAAGAGTGCATTGTCAAAGGTCGCAACATGCCGTTGAACGCCTTCTATCGCATCGCCCGAAACACTCAACGGATGTGGTTCGGCGAGAATCAACGGTCGGGAAGCGAGGCCGAGGGCGCGTCGGCCGGCGAAGTCGAGACTGCCTTCTGGAAGCACGTGGCCGAGCGGAAGCGTCACGTCTGCGTTCACGCAGCGAGCATCGACTCCAGCGGTCGAGGTTTCGGCTTTTCCGTCGCGAAAAACAGTCCCTTCGCCAGACATCCCTGGAATCTCAAAGTATTGACCAACAACGCTGGCTCCGTGCTTCGAGCTCTGGGGCCTCTCATGGgcgtaACTGTACCAACGCTGCACGTCGGCATGCTCTTCAGCGCGTGCTGCTGGTACCGCGATCCTCACGGGCTGCCCTGGATCGAGTATCTTCACACCGGCGCCAAGAAGATCTGGTACGGAATTCCCGACGAGCACAACAACAACTTCAGAGAGGCGTTGTCGAAAATGGTTCCACGATACTGCAAGAAGAAGACTATCTGGCTGCCGTCCGACACGGCGATGGTGCCTCCAGAGATGTTGGTCAGCAACGGAGTTCCTCTCTGCCAGACGGTCCAGGAACCCGGTCAATTCATCGTCGTCTTCCCCAAAGCGTTCACCTCGAGCATATGCACCGGTTACGTCGTTTCCGAAAGCGTGTACTTTGCCCAACCCGCGTGGCTCGAAAATGCCGAGCAAGTCTTCAAGGATCTCCAGGACAGCTGCGAGCCGTCGATATTCTCGTTCGAGCGACTTCTCTTCAGCGTCATCAACGACTCGCGCTCCCATATCGACGTACTGAAGCAGATTATGCCGGCGGTCTTGAAAATTCGTGAACGTGAACTGGAGTATCGCAAGCAATTGGAATACATAGGATTGGCAAATAAGGAAAAGCTACCACTGCCCGACACGGGCAAGGGAAAGAAAGGGAAGAAGGTGAAGGAGGAGGACGGTGATTTCGAGTGTGAAACTTGTCGGGCCAATCTGTTCGTCTCCCTAGTTAATAATTCCAACGACGACAGCGTATACTGCCTGCCTCACGCTCTTCAGTTGATCGTGAGAAAGAGACAAGtactgaaaaattgtacactgATGTACGCTTATACCGAGGACGAGTTGGACGACTTGATACACAAGCTGGAGGACAGGATCGAAGCCAAATCGAAGAAAGCTAATCAAATGAGGCAATCTAAGTAG
Protein Sequence
MVLGRNDKRKRKEGDLVDLMDPLSESPKRTKVHAQRKFAQGAATVFSPAPTMVKEKEKTKPAVITELITHKRPNTEDFLTFLCFRGTSILPPSLNFFNVGSKKEKSEGKVSSCTKSNSRSSSSASVPSTAISKADSTSNSQSKVGAKGATTAKKKVPPSVAQKPPLSKYKTATSTVQALKKKYQEQRLAKQRIRNKFKASCVMRTRSSTERVVLKSVAKLAPRKFLARNETKKRHGLRSGALSEKVIKKSSVPQPKGRPIGSKPKKRLVAKEQTSESSESESATSDDEATTSKNTPQLKRSGKAIQKKICTRSKSEMRRITRSQRESAPSGQSGMSRRPSRKTKEAAAVYMEILGRKLVSPDIENDDNLSVDSFPELPNARRTAQAESEIKAKSKQASKNRETKDKESKDTKESNAKSKPKVEKPILKSSKRTLRVRRYCELDSEDESETSVEPDKTRHVTRRSVGKTEKPATRSLRSSSRNQPAKSEVSSPAKVPKEKEKIATAKRPKPPTKKPESDESEEESLGTLLDKLKKKKEEKSEPRKSATQVEAPAIEVAPEQPECPEQSENPTPSQVSDDEESFRGFTKKAISKVLSSCNSHVNANLLASEEAYGKLEAPKSQEAPKLEVSREAKHSPADEKPEPATSLHEVKTPVFTIVKPVQESTLLTRKLVIADPEEVPEPENKCNHVAESSPMNIIDMPLMGIHGRKARVNMSTEQIEKWLNESSMARAKQRKQPDEPSQNFPFEVPEKVPKPDMNHLSIPTRIQHLVRPVNVTIAKLAEKNGARDRMGLASRIAPTFVTGARIPLAKPLNVPTPNRNKINADIKEIIKGRSATKATKETSTGEESDTVSKSDQNSVDGSPDKKSTPEKKGIFQQRKTFLPRVKERKTATPNANAFSPENESSVYAFESDTEVPINTPFRRKLKELGHKCGAPSEPDTSRTGEDSKFSELGTSSETDGKSSSNKFAMPKSFGNLSNVQVLPLGKMPTEWGGVNCSASIAVQVNFDEQQRGLEESSMVQESEDPQQKCTEISTQTENTNDNEDDNDGGHVFYIPLQTVTRNGPNLVQGQQLIQGVAVKLGTEGPNGPNQRVLLRAQLVTKPPLAVARCPPVGTVQPTTRTPPNSTSSTSVLDHPYAVVDPPVASTSALPVPVVAPVQASADFQPPQPQPPLGRAAANLSTKQGTSGSNASAEKVTKSPKAARERKASVDSTKTGKRASAKSRAKAAEVLSPSNTTAFPGSANSNAEARLVEAPTFHPTEKDFQDPLEYIDKIRPIAEKFGICRVVPPANFKPECKVSDDMRFTAYNQYVHRMLHRWGPNVKEMMAIKKYLATQSITLTHPPWIGGMEVDLPHLYQTVQSLGGLKEVIEKKKWQKVADGMKIPKSAQDRVTKLDDIYCKYLLPYDTLSPEERGKLFDDVEEDWKIRETKTLQRLDAQSNDNDEEDDDDSSDEIEECIVKGRNMPLNAFYRIARNTQRMWFGENQRSGSEAEGASAGEVETAFWKHVAERKRHVCVHAASIDSSGRGFGFSVAKNSPFARHPWNLKVLTNNAGSVLRALGPLMGVTVPTLHVGMLFSACCWYRDPHGLPWIEYLHTGAKKIWYGIPDEHNNNFREALSKMVPRYCKKKTIWLPSDTAMVPPEMLVSNGVPLCQTVQEPGQFIVVFPKAFTSSICTGYVVSESVYFAQPAWLENAEQVFKDLQDSCEPSIFSFERLLFSVINDSRSHIDVLKQIMPAVLKIRERELEYRKQLEYIGLANKEKLPLPDTGKGKKGKKVKEEDGDFECETCRANLFVSLVNNSNDDSVYCLPHALQLIVRKRQVLKNCTLMYAYTEDELDDLIHKLEDRIEAKSKKANQMRQSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01207132;
90% Identity
iTF_00058465;
80% Identity
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