Basic Information

Insect: Amblyjoppa proteus
Gene Symbol: -
Assembly: GCA_963922035.1
Location: OY998228.1:15856379-15865995[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 3 2.9e+02 2.7 0.3 1 12 65 76 65 78 0.90

2 19 0.032 3.1 8.9 0.4 1 21 92 112 92 115 0.85

3 19 0.61 59 4.9 1.3 2 23 127 149 126 149 0.92

4 19 0.037 3.6 8.7 0.7 5 23 435 454 434 454 0.94

5 19 2.6 2.5e+02 2.9 1.1 1 10 510 519 510 528 0.95

6 19 0.023 2.2 9.3 1.0 1 21 563 583 563 584 0.93

7 19 0.00028 0.027 15.4 0.8 1 23 591 614 591 614 0.97

8 19 1.9 1.8e+02 3.3 3.7 3 23 626 647 624 647 0.93

9 19 0.11 10 7.2 0.0 2 21 727 746 727 747 0.94

10 19 0.54 52 5.0 3.2 1 23 788 811 788 811 0.92

11 19 2.9 2.8e+02 2.7 0.0 1 20 846 865 846 867 0.92

12 19 0.016 1.5 9.8 0.2 1 23 874 897 874 897 0.93

13 19 0.33 32 5.7 2.4 2 23 908 930 907 930 0.94

14 19 4.8 4.6e+02 2.0 0.1 3 20 1022 1039 1021 1040 0.94

15 19 0.064 6.2 7.9 0.2 3 23 1081 1102 1080 1102 0.89

16 19 0.00011 0.01 16.7 0.1 1 21 1151 1171 1151 1176 0.93

17 19 0.0038 0.37 11.8 0.2 3 23 1192 1213 1191 1213 0.94

18 19 0.00019 0.019 15.9 0.2 1 23 1273 1296 1273 1296 0.97

19 19 0.00084 0.08 13.9 0.1 1 19 1372 1390 1372 1392 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	3	2.9e+02	2.7	0.3	1	12	65	76	65	78	0.90
2	19	0.032	3.1	8.9	0.4	1	21	92	112	92	115	0.85
3	19	0.61	59	4.9	1.3	2	23	127	149	126	149	0.92
4	19	0.037	3.6	8.7	0.7	5	23	435	454	434	454	0.94
5	19	2.6	2.5e+02	2.9	1.1	1	10	510	519	510	528	0.95
6	19	0.023	2.2	9.3	1.0	1	21	563	583	563	584	0.93
7	19	0.00028	0.027	15.4	0.8	1	23	591	614	591	614	0.97
8	19	1.9	1.8e+02	3.3	3.7	3	23	626	647	624	647	0.93
9	19	0.11	10	7.2	0.0	2	21	727	746	727	747	0.94
10	19	0.54	52	5.0	3.2	1	23	788	811	788	811	0.92
11	19	2.9	2.8e+02	2.7	0.0	1	20	846	865	846	867	0.92
12	19	0.016	1.5	9.8	0.2	1	23	874	897	874	897	0.93
13	19	0.33	32	5.7	2.4	2	23	908	930	907	930	0.94
14	19	4.8	4.6e+02	2.0	0.1	3	20	1022	1039	1021	1040	0.94
15	19	0.064	6.2	7.9	0.2	3	23	1081	1102	1080	1102	0.89
16	19	0.00011	0.01	16.7	0.1	1	21	1151	1171	1151	1176	0.93
17	19	0.0038	0.37	11.8	0.2	3	23	1192	1213	1191	1213	0.94
18	19	0.00019	0.019	15.9	0.2	1	23	1273	1296	1273	1296	0.97
19	19	0.00084	0.08	13.9	0.1	1	19	1372	1390	1372	1392	0.96

Sequence Information

Coding Sequence: ATGGCACAGAAGCCCACTCGCAATTCGGGCGTCAAAGAACGTCCCACACTGGCACCGAAACGCGCCAGGTCGGATACGCGACATACAGAAAACATTTatgcaaaattttataaaggCAAATTGAACGTACATAATATGTTGCAACCGGCGGCTTTGCAGAAACCGTCGCGAAAATTGGCGGTTCGTAAAACCTTTAAATGCGGTGTTTGCCACGTGACATTCGCATCGATGCGCATCGCCTCGCGTCACGTTGAGTATTATCGTCAGCCGAAGTATCCGTGCGAAGAATGCGGCACGAAATTTGCCGACACGAGACAGTTGGAATTTCACGTTACATACACTCACGGTGATGTGCAGAACGTGACAATGTACAAGCTACAGTGCCCGGTCTGCAAACAGATGGCCGGAACAAAAACATTTCTTCAGTCTCATCTGTATCACTACCACAACGAATGGGCAGTGAAGAATCGAATGCATCAAGATACATTTGTTTCGAAGTTCATCGAGACTCACGGAAACGATCGAGCAAACGTGGAAGGGAAGACAACGAAATGGCCCCGGATGATATCAATGTTGAAACACCTGCAAGGTATTTCACGTTCCTCAATGAGCGTTCCGCCTCCCGGAAGTGCGAATTCTCATAAAGCTCGTGACGCTTCAACATCATCTTCATTTGCCAAGCAAGCTATCGGTGTCCCCTTTGTCAAAACGCATGGAAGTCAAATCCTATTcgaaactgtactgaatggcATAAAGGTGGAAGCGTCCGAAAACCAACCGGAAGATTCGGGTCGTTTCTCGATTCCGAATCGCCCGAGTGAAAACGACCGCGAAGAAATGCTGAGAGTGATGCACTCGTGCAAAGAGTGTTACGTGCCATTGCCGAGAATAAGAGTATCGAGGCCTACGACGGAGAAGGAAAAGCAACCGGAAGAGATCGAAGAGGAAAAGCGACCGGAAGGGATCGAAGAGGAAAAACGACCGGAAGAGATCGAAGAGGAAATGCGACCGGAAGAGGTCTTAAAGGAAAAGCAACCGGAAGAGATCGAAGAAGAAAAGCAACCGGAAGAGATCGAAAAGGAAAAGCCGGAAGAAAAAACGGAAGACTATTGCAACAGCTTTGAGGCTACATCGCTGGACGAACTATGCTTGGACGACTGTCCGATAAAATTCGAGCCGGAAGAATTCGTGGAGAGcaccgccgagtcatcggaacATCAGAACTCATCTTCTTCACGACTCGCGAAAACTGCTGCCTCCAAATCAAAGAAGAACCACCCGGTCGTTCGCATAGCCTCAAAGATTTGCGACAAATATTTCCCGAGCAAACGCGCGATGCAGCGGCACTTCCGCCAACGTCACATGATAGTCGCCGACGACGTGGTGTATTGCGTGTGCGGCAAGACGATACCCAGCCGCAGGGAGAAGGAAAAGCATTTCTACGAACACTGCGGCGAGCTCGTTACCGCGAATGCCGCCGACACGATTCAATCGGCATTCGCGTCTTGCAGGCTCTTGGAGAAGAAGCACGAGTGCCCGAAGTGCGGCGAGAAGTTCTGGCTGGAGACTTGCCAGCAGGATCACCAGAATGAATGCAGATCGGTGAAGAGCGGCGAGAGCGTTCGACTCGCATTAACGATGGAACTCCATTGCAGATACGCGCAAACGTTGCGCAGCTCGGCTCACCACGTTTGCACAAAATGCAACACGGGATTTAATTCTGGGTCGACCCTCTGGCAGCACAAGCAAAAGTACGCCGGTTCCGAGAGCCATCAGTGCCCGATCTGCAAGACCATGTTCAGCGGCCGGCGCCTCCTCAAGGGCCACATCCAGTCCGCCCACGAATCCAGCCGCAAGAAGCTCTACTCGATTTTCTGCGAAATTTGCAATCAAGGCTTCACGAAGAAtctctacaaaaaaattcacataatGCATTGCCACTCCATCGAGGTCGAGAGATCCATCAAAGGTACCGAGGTAACCGTCTTGAGACCATCGCTGCCCGATCCTCCGAAGGTCGACACCACCGCCACGAGCCGAGTCGACTCAGATGTCGAGAAGCCGACTCCAGcgccttcttcatcttctttccTTTCTTGGCTATCGCCCTCTCGTGAGAGCATGTGCCACTCGTCTCCAGCGCCTCCGACGCCTTCGAGGTCTTCCGGAGCCGACAACAGATGCGCGGTCTGCGATATCGTGTTCGTGAGTCGAAAGCGCTTTATCGATCATATGATTTATTACAAGAAGAGCGAGATTATTTACTGCGGCATATGCGGCAAGGACCTCAGAGGCCAGTACGTCGCTCATCATCACAATAAGAAGTTTCATTATTCCAGGGACATGCAGAATTCCTACACTCACCGCTGCACGATTTGCCAGGACGGTTTCATGTACAGGACCCACCTGCAGGCTCACGTCGCCCACGTTCACGGGAACGCCTTGAGAAACCCGGCTCTCCTGTGCGACGAGGATCGGAGGAGCGCCATTCAGAGCtggaaaccggaagtcgctCGGAGCGCCGGCGGTTCGAAACACTCGTGCCCGGTTTGCGAGATCCTTTTCCTAACGGCCGCTGCGCTGATGAATCACCAAACGCAGTACTCGAACGACGGCGACTTCGCGTGCAACCAGTGTCCGAGGAAATGTCCGACAGCGGCGATGCTTCTCGACCACATCGCTCTGAACCACTCCGAGGGCGTCGTCGTTGAGGGTGGAGTAAAGTGCAGTCGCTGCAACGAGCATTTCGTCACCCGAGCTGGTTGGGTTTCACATGTGAAGCATTTTCACAACAGCGACGGCGACGAGCCTTCGGAGTTCTGTTTCGAGAGCAACTTGACGTCGTCGAGGGAGTTTGGAAACGTCGAGATCGAGCTGATTCCCATGAACGACTCGATATCGAGCGGTATGGCGTACATCAGTTTCGGTAGTTTGATCGATCTTACGGGCGGCGAGGGCGCGAAGCCTGCGAATGTGTGCAGCACGAGAGGCGAAGCGCTCGCTCTGCCGGCCACTTCCGGTACGACGAAGAAACCAAATACCATCGAGAAAACCCGGAAGAACTGCGGTACTTGCGGATTCGCTTGTTCGGGAACGGCTGAACTCGCCGATCACATAGGTCTGTACTCGAACACCGGTCGCTACAACTGCATCGTCTGCGACCGGAGATTTCTGTGGCGGAGGTTCTTCGAGGATCACAAGAAGAAACATTTTCGTCGTTCGCCCGAAGACGTAAATTTCTGTCCCACGTGCGGCGAAGGCTTCGAAAGGCTCGCGGACATGAGGATGCACGAGGCTCATCTTCATCGAACCTGCAGCGACGTCGACGAGGCTAATGGACTGCTCGCTGTAAGCTGTATGGAAAACAGTGGCGCTGAATCGAAGCAAGAACCAACGAACGGCAGTGATCGAGCGCGAACGGAGCAGCGCGAAGATAAAGTACCGTTTGCTTACGAATGTCCCATTTGCAAGAAGACGTTCCCAAGGGAAGATGCACTGGACGCACATCTGACGTCAGCGGATAATCACATGGGTGAGGGAGACTCGTCGAGCAGTGGCGAGGGACCCGCGATCTGCGTCATCTGCGATATGGTATTCGTAAGTAAGAAATTATTGAGGATTCATGAAAGTAAATTCCATTCGTCAGTTGCAGCAAAACCGCCGACGCCAAAGCAATGCCCCGATGCTGTCGATCGTTTCTACGTCCTGGCCGGTGTCGAGATACTTCCCGAAGCCGTTGAGGTACTGCagaaaaattttgatcgatGCAACAAAAGGCTCGGACTGACGAATTCGATTTATCGATACGATCCGTCGTACAAGTGCGAGATATGCGAGATCGTCGTGTCCAGCAAGGATTCTCTGAACGTTCACCAGACGAAGAGCCACACGGTACCGTCGAACGTTCCGATCGACAGTGAAGATACCGAAGGGCGGAACTCGACGGAGATAGTCGTCGAAAAAACGTTACCGTCCAGCTCCGGCTCGGGCGGGGACGAAGTTTCGACGTTGCAAAAGCGCACGGACGATCCACCTAAGAAAACTGTTCTGCCGACATTCACCAAGAGCATTTTAAAATctgtgtccacgatatcggagACTCGAGTCACGCACTACAGATGCAAGATCTGCGATCTTATTTTcgtgaacaaaaatttgttgcgTGTTCACAAAGTGAACGGTAACTGTGTTAGAGGTTCGGTCGAGCGAACCGACGGTGATCGCCCGGACAAGGAGAAACTGCGTGTTACGAAGGAGCTTCAAACACTTACGAATGGTCCACCGGTCGAAGCTGCAAAGACGCCGGTCAGCCCAGCGATTTGGCCAAACGCCTCAACTTTGCCGCCGAATCGGATCCGGTTCCTAAGCTTACCACCAGGCAACTATAGAGTGGGAAAATTGAACGTAAAACCGTTCGGCAAGGTAGTCCAGAACTTGATCAAACAAACTGGAGATAAGAGAACGAACGAGATCGCGAAAAACCCGGCGCCTGTTTCAGCAAAGCGAGTGAAGAAGGTATTCGACCCTGTTGCGTATCGGGAACTCTGCAGACAGCACAACTTGTTCCCCATGACGAAGGATAATAAAGGATCGACTGCGAGGGAAACTGTGTACGATCGTTGCGCATACATGGGATGTTACAATGGCAAATTTATCAACGGCCGAAGACTCTTCCACTTTCCGGCTGAGACGGATAGACGGCTCGAGATGTGGATCGAGAGAAGCGGAAATTTTCGTTTGCGGACGTGGGCAGCTACTTCGCTGCGCAAAGCGGGGCTTTGCGGAGACCACTTTGATGAAAAGTGTTTCACCGATGCAACGAGGAAAGCCTTGAGAAGAAATGTTGTGCCGAGGCATTACACGGAAGATTTGAAGTACAGAGAAGCGAATAATGGGATCGTGGAAAATAACGAAAGTACCAAAGAAAACACGGCCagcgaggaggacgacgatcCGATGAATTGCGATCGTTTGTCGCCGTTCGGCGAATCGGCGGGTCAGGCGAAAGAATGCGGCATTGAAATTCATGACGAATCTTCCTTACAGTCCGGCGAGTACATTGTAGGGGATCCGCTCAAAACTTCCACGGGCGAGCGATCGCCGTCGCCGGTCGTTGAATTTATCGTCGAGGAGCTCGACGAGAGTTTCATATGCGATCAAGCGGAGGAAcccgatgaaaaatcgatattcGAAGAAGAGACGGAAAACGACGATTTACCGAGCCACGATGAGTACGCAACATCGCCGATGAGCATGGAagaatcggaagaggcggtcGAATCCGCAATCGGAGGAGCCGGTCTGAGAGTCAATCGATCAAACTCGGACGTACGAACGTATTATCGTTCGAAGAATCATCGATCGACGAACGGCGACCAAGTCGCACAGGTAAATTTTGAACTGGTATCCGAAGAATCGGAGCCGATTACGAACGGGTACGAATCGGCCACGCCAATATTTCGAACCTCGAACATGGGATGCGGAAACAGACGTCATGAAAAGATGCTGATGAATCTTCACGAAGAGAACAAAATGTTACGAAAGAAGATGCGACTTCTGAAGCAAAATCTTCGCAGGTCGAAAGCTCGCGAAGCAAATTACATGAGAGTCCGCGATATGCTGAAGGACGTAGACGAATTTCTCAATATACAGGAGTGCAGCAACCCGGTTGCTCGAGCGATGGTAAAGCTGGCTCTGCACAAAAACAGGAGTCCTTACACGAAGGAGGAAAAAGACTTTGCCACGCAGCTGTATCGACACTCGGCGACCGCTGTCGTTCTATTGCGAAGAGCGGGCTGCAATTTTCCGGGGAAAAACACGATTAAACGATGGATCGCCGAAGACCACGGTGAACCGCCGGCATTTAACTTCTTGATTGCGGATGGAAGCGACGATGCTACCGAGGACGCGGGCGTCGACGTGGATGACGCTGATGACGCCGATGACGATCTGGTGGAAACGGTCGACGCCATAAATGAACCGACTGATAATATCGACGATGTGGTCGAAGACGCGGAGGTGGTGATCAACGATTTGGTCGAACATTTGGAAGAGGTGATAGATGAACAGGAAGAACGTCAACAATACATCCATGTCCTCCCagtaaatttcaaataa
Protein Sequence: MAQKPTRNSGVKERPTLAPKRARSDTRHTENIYAKFYKGKLNVHNMLQPAALQKPSRKLAVRKTFKCGVCHVTFASMRIASRHVEYYRQPKYPCEECGTKFADTRQLEFHVTYTHGDVQNVTMYKLQCPVCKQMAGTKTFLQSHLYHYHNEWAVKNRMHQDTFVSKFIETHGNDRANVEGKTTKWPRMISMLKHLQGISRSSMSVPPPGSANSHKARDASTSSSFAKQAIGVPFVKTHGSQILFETVLNGIKVEASENQPEDSGRFSIPNRPSENDREEMLRVMHSCKECYVPLPRIRVSRPTTEKEKQPEEIEEEKRPEGIEEEKRPEEIEEEMRPEEVLKEKQPEEIEEEKQPEEIEKEKPEEKTEDYCNSFEATSLDELCLDDCPIKFEPEEFVESTAESSEHQNSSSSRLAKTAASKSKKNHPVVRIASKICDKYFPSKRAMQRHFRQRHMIVADDVVYCVCGKTIPSRREKEKHFYEHCGELVTANAADTIQSAFASCRLLEKKHECPKCGEKFWLETCQQDHQNECRSVKSGESVRLALTMELHCRYAQTLRSSAHHVCTKCNTGFNSGSTLWQHKQKYAGSESHQCPICKTMFSGRRLLKGHIQSAHESSRKKLYSIFCEICNQGFTKNLYKKIHIMHCHSIEVERSIKGTEVTVLRPSLPDPPKVDTTATSRVDSDVEKPTPAPSSSSFLSWLSPSRESMCHSSPAPPTPSRSSGADNRCAVCDIVFVSRKRFIDHMIYYKKSEIIYCGICGKDLRGQYVAHHHNKKFHYSRDMQNSYTHRCTICQDGFMYRTHLQAHVAHVHGNALRNPALLCDEDRRSAIQSWKPEVARSAGGSKHSCPVCEILFLTAAALMNHQTQYSNDGDFACNQCPRKCPTAAMLLDHIALNHSEGVVVEGGVKCSRCNEHFVTRAGWVSHVKHFHNSDGDEPSEFCFESNLTSSREFGNVEIELIPMNDSISSGMAYISFGSLIDLTGGEGAKPANVCSTRGEALALPATSGTTKKPNTIEKTRKNCGTCGFACSGTAELADHIGLYSNTGRYNCIVCDRRFLWRRFFEDHKKKHFRRSPEDVNFCPTCGEGFERLADMRMHEAHLHRTCSDVDEANGLLAVSCMENSGAESKQEPTNGSDRARTEQREDKVPFAYECPICKKTFPREDALDAHLTSADNHMGEGDSSSSGEGPAICVICDMVFVSKKLLRIHESKFHSSVAAKPPTPKQCPDAVDRFYVLAGVEILPEAVEVLQKNFDRCNKRLGLTNSIYRYDPSYKCEICEIVVSSKDSLNVHQTKSHTVPSNVPIDSEDTEGRNSTEIVVEKTLPSSSGSGGDEVSTLQKRTDDPPKKTVLPTFTKSILKSVSTISETRVTHYRCKICDLIFVNKNLLRVHKVNGNCVRGSVERTDGDRPDKEKLRVTKELQTLTNGPPVEAAKTPVSPAIWPNASTLPPNRIRFLSLPPGNYRVGKLNVKPFGKVVQNLIKQTGDKRTNEIAKNPAPVSAKRVKKVFDPVAYRELCRQHNLFPMTKDNKGSTARETVYDRCAYMGCYNGKFINGRRLFHFPAETDRRLEMWIERSGNFRLRTWAATSLRKAGLCGDHFDEKCFTDATRKALRRNVVPRHYTEDLKYREANNGIVENNESTKENTASEEDDDPMNCDRLSPFGESAGQAKECGIEIHDESSLQSGEYIVGDPLKTSTGERSPSPVVEFIVEELDESFICDQAEEPDEKSIFEEETENDDLPSHDEYATSPMSMEESEEAVESAIGGAGLRVNRSNSDVRTYYRSKNHRSTNGDQVAQVNFELVSEESEPITNGYESATPIFRTSNMGCGNRRHEKMLMNLHEENKMLRKKMRLLKQNLRRSKAREANYMRVRDMLKDVDEFLNIQECSNPVARAMVKLALHKNRSPYTKEEKDFATQLYRHSATAVVLLRRAGCNFPGKNTIKRWIAEDHGEPPAFNFLIADGSDDATEDAGVDVDDADDADDDLVETVDAINEPTDNIDDVVEDAEVVINDLVEHLEEVIDEQEERQQYIHVLPVNFK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00721538;
90% Identity: iTF_00058230;
80% Identity: -