Basic Information

Insect: Amblyjoppa proteus
Gene Symbol: -
Assembly: GCA_963922035.1
Location: OY998230.1:28501208-28507312[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.00054 0.052 14.5 0.4 2 23 287 308 286 308 0.96

2 9 0.012 1.1 10.3 0.2 1 23 314 337 314 337 0.91

3 9 0.00017 0.016 16.0 0.5 1 23 413 435 413 435 0.98

4 9 8.8e-05 0.0085 16.9 1.3 1 23 441 463 441 463 0.96

5 9 3.9e-06 0.00038 21.2 1.9 1 20 469 488 469 491 0.93

6 9 0.00033 0.032 15.1 3.8 1 23 497 519 497 519 0.98

7 9 0.00019 0.018 15.9 3.8 1 23 525 547 525 547 0.99

8 9 1e-06 0.0001 23.0 0.4 1 23 553 575 553 575 0.98

9 9 0.00081 0.078 13.9 3.0 1 23 590 612 590 613 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.00054	0.052	14.5	0.4	2	23	287	308	286	308	0.96
2	9	0.012	1.1	10.3	0.2	1	23	314	337	314	337	0.91
3	9	0.00017	0.016	16.0	0.5	1	23	413	435	413	435	0.98
4	9	8.8e-05	0.0085	16.9	1.3	1	23	441	463	441	463	0.96
5	9	3.9e-06	0.00038	21.2	1.9	1	20	469	488	469	491	0.93
6	9	0.00033	0.032	15.1	3.8	1	23	497	519	497	519	0.98
7	9	0.00019	0.018	15.9	3.8	1	23	525	547	525	547	0.99
8	9	1e-06	0.0001	23.0	0.4	1	23	553	575	553	575	0.98
9	9	0.00081	0.078	13.9	3.0	1	23	590	612	590	613	0.96

Sequence Information

Coding Sequence: atgCAGAGAACTCTCACCCTCGAGCGGGACATGTCGGTCTCGCATGTGCCCGAGTCTTTCTGCCTGGTCTGCGAGACGGTTCTCGACTCGTCGTCGTGCACGAACATCTTCTACTCTTCGCTGCCGAGGTACGGCGAGTTGCTCGCGAGTTTCGTTCTCAGGGTATTGCGCCCGGTCGCCTCGGACCTCCGAAGCTCTTACATATGCTCGCGCTGCCACGATCTCTTCCGGATGCTCGAGCAGGCGCAGTGGACGGTCTCGAGCGTTAAGTCCGAGATCCTCAAAGTCTATAATTCGAGAGTTACCGACGGAGCCGCGAGCGAGCGCAAGGCGGCGCTTCCCGTCTCGCACTTGCTGCCGGACGACGACATATTCGTCGACGATCGTTCGACGGTCGGTAAGAGCATCGTCGACGAGGGAAACTTCGTCGACATTCACGGATTGAGGGGTCTGAACGTAGCGCGAAACGAGTTCGATAGTTTGAGCATTGTAATCGATAATCTGAACGAGACGAGCTGCGGCGACGACGTCAAGAGGGACATCGAAGCTTCGATGAGTCTCGAGGCGCAGCAGAACGGTTACAAGCTCGACGATCTCAAGGTCGAGGCGCACAGGGAAAAGAGAACGGAGACTGAgggaacgataaaaaattgccgcAACGAGACGCCGAGCGGCCCGACGAAAAATTCAACGCCCGATGAGCGCGAAGAGGCGAGCGATATAATCAGCCAAATTTCCAAGGAACTGCAGACAAATTCGAGGGCCGAGCAGCGTGTGGACGATTCGATCGACGATATCTCGGGCTCGATAGCCCAAAATTTTGATCCCCCGAACGACGAGAGGTCGCTGTACACGCTTCAGTGCGGCCTGTGCGGCCGTTTGTTCCGCTCGGCGACGGAGCTGCGCTCGCACTCGCTCAGGCACGGTGGAACGCTTCCGTACAAGTGTCGCGAGTGCGACGAGAGATTCGCCGATGTGACGACGGCGACAAATCACACTTCGGAGGCTCACGAGTCTGTGAAAAATTGCGTGCTAGTCTCGAGCGAGCCGGCCGACAACgagatcgttgatttttcgaaGGAGGACTGGATCGTGCCCGAGGAATTTCGGAAAAGCGCTCTCGAGGATTCGAGCGTAAGAGCGGATGGCGACGATACCGGATACGGCGAGAGGAGTTCCGAGCGTGCCTCATGGAAGTCCGGCAGGATCTCGAAGTACAGTCAGAAACCGCTGAAATATCCGTGCTCGACTTGCGGGAAGAAATGGCGAACCTCGGCGGAATTGAAGACTCACGTTAAGTCGCACTCGAGTCTTCGGCCGTACATGTGCGAGAAATGCGGACAGGCATACAAGCACAAACACGCCCTCGAGATACACGTGGGTATGCACAACGGCATTAGCCCGTTTCAGTGCAGCGTCTGCAACAAGTGCTTCACGCAAAAGGGCGCACTCATGAGACACCTGCCCATGCACACCGGCGAAACACCATATCAGTGCGAACTCTGCGGCAAACGATTCGTTCATCACACCTCGTACAACATGCACGCCCTCTCGCATACGGGAAAGAAATCTTATCAGTGCCATGTGTGCGACTTGTCCCTATTGTCAACGTCTCACTTAAAACGGCACATGCGAGTTCACACGGGTGAAAAACCATACAGTTGCGCGCTGTGCGGTAAGAGCTTCGCGGAAAGATACAATTTGTTTGCCCATCAGAAGATTCACGATCCCGTTGAGATAATGGCGAAAGCGGCTAAGAAGATGACTTACAAGTGCGAGCTGTGCGACGAATTCTTCGACAAGAAGCAAAAGCTCGAGGATCACACGAAGGAgcatcataatcataatcacaATCACTGCAGCTCGAGCAACGATCCAACGAACGGAAGTAAATGGATCGGTCACACGGTTGACGTGGAAACGCCGACGAGAACAAACGACGTTATTATCGAACAATCGTGGCAGGATCTCGATTACTCAAAGTTACAAAGCGTGGCCCTCAAAGCCGCACAAAACGACAATCAATTGTCACAGTTGACGCACGAATCGATAGCGATTCTGATGTCACAGACTAACAACAACAAGGGAATGACCGTTGTTGCACAAACGAACGATACGACCCTTAATACGGAAATCGATCGATCACAAATCTGA
Protein Sequence: MQRTLTLERDMSVSHVPESFCLVCETVLDSSSCTNIFYSSLPRYGELLASFVLRVLRPVASDLRSSYICSRCHDLFRMLEQAQWTVSSVKSEILKVYNSRVTDGAASERKAALPVSHLLPDDDIFVDDRSTVGKSIVDEGNFVDIHGLRGLNVARNEFDSLSIVIDNLNETSCGDDVKRDIEASMSLEAQQNGYKLDDLKVEAHREKRTETEGTIKNCRNETPSGPTKNSTPDEREEASDIISQISKELQTNSRAEQRVDDSIDDISGSIAQNFDPPNDERSLYTLQCGLCGRLFRSATELRSHSLRHGGTLPYKCRECDERFADVTTATNHTSEAHESVKNCVLVSSEPADNEIVDFSKEDWIVPEEFRKSALEDSSVRADGDDTGYGERSSERASWKSGRISKYSQKPLKYPCSTCGKKWRTSAELKTHVKSHSSLRPYMCEKCGQAYKHKHALEIHVGMHNGISPFQCSVCNKCFTQKGALMRHLPMHTGETPYQCELCGKRFVHHTSYNMHALSHTGKKSYQCHVCDLSLLSTSHLKRHMRVHTGEKPYSCALCGKSFAERYNLFAHQKIHDPVEIMAKAAKKMTYKCELCDEFFDKKQKLEDHTKEHHNHNHNHCSSSNDPTNGSKWIGHTVDVETPTRTNDVIIEQSWQDLDYSKLQSVALKAAQNDNQLSQLTHESIAILMSQTNNNKGMTVVAQTNDTTLNTEIDRSQI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01364887;
90% Identity: iTF_00058177;
80% Identity: -