Basic Information

Insect: Amblyjoppa proteus
Gene Symbol: mecom-b
Assembly: GCA_963922035.1
Location: OY998228.1:6613818-6619654[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.011 1.1 10.3 0.4 2 23 25 47 24 47 0.95

2 8 0.00013 0.013 16.4 0.7 1 23 83 111 83 111 0.93

3 8 4.1e-06 0.00039 21.1 2.6 1 23 117 139 117 139 0.95

4 8 2.5e-05 0.0024 18.7 5.0 1 23 145 167 145 167 0.99

5 8 0.00018 0.017 16.0 0.7 2 21 175 194 174 195 0.95

6 8 8.2e-10 7.8e-08 32.8 1.2 1 23 567 589 567 589 0.99

7 8 8.9e-08 8.5e-06 26.4 1.7 1 23 595 618 595 618 0.97

8 8 8.7e-06 0.00083 20.1 3.4 1 23 624 646 624 646 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.011	1.1	10.3	0.4	2	23	25	47	24	47	0.95
2	8	0.00013	0.013	16.4	0.7	1	23	83	111	83	111	0.93
3	8	4.1e-06	0.00039	21.1	2.6	1	23	117	139	117	139	0.95
4	8	2.5e-05	0.0024	18.7	5.0	1	23	145	167	145	167	0.99
5	8	0.00018	0.017	16.0	0.7	2	21	175	194	174	195	0.95
6	8	8.2e-10	7.8e-08	32.8	1.2	1	23	567	589	567	589	0.99
7	8	8.9e-08	8.5e-06	26.4	1.7	1	23	595	618	595	618	0.97
8	8	8.7e-06	0.00083	20.1	3.4	1	23	624	646	624	646	0.99

Sequence Information

Coding Sequence: ATGCCTCTTATGGCTTCGCAACACAGCGGCACCGTCGACGAGGATCGAGAGGAAGAGATAGAAGTTGAGATCAGGTGTACCGTTTGCGATCGACCCTTTCAGGACATTGAATTACTGGACAATCATCTAGTGACGTGTCATCGTTATCCCTCGGACCAGCACAGGTGCGAGAGTTGTCCGAGCGGTTACGCCTGGCGACCATTGCTGGTTCGTCATCGTGCAATAAAGCACGGTGATCTGAAGAAGTACTCTTGCGAGAATTGTCCCAAGTCTCAACCCCCGCAGGTGTTTACGGACCCGTCCAATCTACAACGTCACATAAGGGATCGCCACGTCGGTGCGCGAAGTCACGCCTGCACCGAGTGCGGCAAAACGTTCGCGACGAGTTCTGGCCTGAAGCAGCACACCCACATCCACAGCAGCGTCAAGCCGTTTCAGTGCGAAGTTTGCTTCAAGGCTTACACGCAATTCTCAAATCTCTGCAGACACAAGCGCATGCACTCGAACTGTCGTATGCAGATAAAGTGCGTCAAATGCGGTCAATCGTTCAGCACAGTGACATCGTTAACGAAACACAAGCGTTTCTGTGACTCGACGATACCCTCGAGCGGTTGCCGGGCGCCACAGGGCACGATGCCTCAACTACCACCCTCGGGACCCAGTCCCTTTCTCGTTTTTCCGCGACCACCGGTATCATTGCCCGGTTGTCTGCCGTTTTATCCGCCGTATCCCGGTATGTTTCCCAACGGTCCGAACTTCATGAACGCCCCTCTGCTGTTTCCGCCGAAAgtgcaacaacaacagcaacaacaaacaCACGAAGCGCCGGAGAAGAGAGGCGATAGTCCGAAGAGAGAAAGATTCACGCCACCGAGATTGTTGCCGCAGCAGACCAAAGTTTCTCCATCGGCCGCCGAGGAAGCGACTTCGACCTTCAGACCTTCACCGGCCCGACCTCCGGTCCAACCTACTCCGGAGGCCGAAGAAACGGAACCTCCGAAACGCCGAGACAGCACTCCGAGGCCAGAAAAGAGGATGAAGATCTCGTCGGAAACCACGACACCCTCACCGAACGAAGAGTCCACCGATCAACCGTTGGACCTTAGAGTTCAGACGAAGAGGGACGACGAAACTGTGGTGACCGTGCCACAGTTCGAGAGCCAGAGTCGTACCCCGTCGCCTGCTCCAGTGGCCATCGAAGATTCCACAGCGGAAACATCGAAACATTCCGAGGAGGAAGACAGCACGGCAATGGAAGTTAGCGAAGTTAAGGACGAGCAGAGTCCGCATCAACGCACAACTGCCCAGCAAGAACAACTTCCTCCCAGCACACCTCCCTACATGGCGTATCCAAGACCGATTCACCCATCGCAGACACAAGCTATGTTTCTCGAGGCTATGTACCGCAACACAGGAGGCTCGGGGTTTCCAGGATTTCCCGGAGGTCCGACAGCTCCGGGATGCTCGCCGGAATCCAGACTCCTGCCGCCTATGCCGCCGTTCGGTCCGCCGCGTGGAATTCCTTTTTTAGGAAGCATCATGAACGGTTTGAGTGGCGCTAGGCCCGGAGGTGGCTTCGATCTTCTGGCGAGACCGCCGATGGGAACGTTTCCCGGCGTCAAACCGTTTCAAGACGCCGTGATAtcgcatcatcatcatcaccaccaccaccatccGGCTGGTAAGATGAAGGATCGTTACACGTGCAAATATTGCGGCAAAGTTTTTCCGCGTAGCGCGAACCTCACGCGACATCTCAGAACTCACACCGGCGAGCAACCTTACAAGTGCAAATATTGCGACAGATCGTTCAGTATCTCGAGCAATCTTCAGCGACACGTTAGGAACATTCACGACAAGCAGAGGCCGTTCAAGTGTCCCCTGTGCGAGAGATGCTTCGGTCAACAAACGAATTTGGACAGACATCTGAAGAAACATGAGGCCGACGATGGAAGCGGCGTCGTCTCCGTTGCCGATTCGCCCGGCAGTAGTAACGAAAATGAACGGGAGGACGCTTACTTCGACGAGATAAGATCCTTCATGGGCAAAGTGACGTACGGCGGTGATGCCGGATACGGATTGGATCGCCATCATCGTCCGGCTTACTGCACGATGCCTGGACAATTGAGATTGGGAGAGGAGTCGGACGTCAGCGAGGAAGACGTCTCGCCGTTGGACGAAACCGATGTTCTCTCGCCGGCCGAGGCCAAGGGGTCTCCGCCGCCTTCGCAGTACGACCTCGAATTCAGAGACAAGCCTGAGCTGCTCAACAACAACACCGCCTCGCCGGTCATCGAGATCTCGACATAG
Protein Sequence: MPLMASQHSGTVDEDREEEIEVEIRCTVCDRPFQDIELLDNHLVTCHRYPSDQHRCESCPSGYAWRPLLVRHRAIKHGDLKKYSCENCPKSQPPQVFTDPSNLQRHIRDRHVGARSHACTECGKTFATSSGLKQHTHIHSSVKPFQCEVCFKAYTQFSNLCRHKRMHSNCRMQIKCVKCGQSFSTVTSLTKHKRFCDSTIPSSGCRAPQGTMPQLPPSGPSPFLVFPRPPVSLPGCLPFYPPYPGMFPNGPNFMNAPLLFPPKVQQQQQQQTHEAPEKRGDSPKRERFTPPRLLPQQTKVSPSAAEEATSTFRPSPARPPVQPTPEAEETEPPKRRDSTPRPEKRMKISSETTTPSPNEESTDQPLDLRVQTKRDDETVVTVPQFESQSRTPSPAPVAIEDSTAETSKHSEEEDSTAMEVSEVKDEQSPHQRTTAQQEQLPPSTPPYMAYPRPIHPSQTQAMFLEAMYRNTGGSGFPGFPGGPTAPGCSPESRLLPPMPPFGPPRGIPFLGSIMNGLSGARPGGGFDLLARPPMGTFPGVKPFQDAVISHHHHHHHHHPAGKMKDRYTCKYCGKVFPRSANLTRHLRTHTGEQPYKCKYCDRSFSISSNLQRHVRNIHDKQRPFKCPLCERCFGQQTNLDRHLKKHEADDGSGVVSVADSPGSSNENEREDAYFDEIRSFMGKVTYGGDAGYGLDRHHRPAYCTMPGQLRLGEESDVSEEDVSPLDETDVLSPAEAKGSPPPSQYDLEFRDKPELLNNNTASPVIEIST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00266682;
90% Identity: iTF_00721474;
80% Identity: -