Basic Information

Gene Symbol
ct
Assembly
GCA_963922035.1
Location
OY998228.1:10218001-10240664[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.2e-27 7.3e-24 84.0 0.0 2 72 563 634 562 639 0.95
2 3 2.1e-32 1.3e-28 99.2 0.0 2 77 969 1045 968 1047 0.96
3 3 7.3e-30 4.5e-26 91.1 0.0 4 75 1203 1275 1201 1279 0.95

Sequence Information

Coding Sequence
ATGCCGGGGATCAAAAAAAGGGGGTGGTACGAGCAAGGTAGCGCCGGGACCGAGaTCAGTCAATTGGTCGAGGAAGTCTCCAGGTTACAGCAGAGTCTGCAGCGTCTCCAAGAGACGAGCGCTCAGGCGACGTCCCGCTTGGAGGAGGAGCTCGAGGCCCGAAGGCAACACATAACTCGGCTCGAGAGCAAACTCGAACGTCAGCGAGACTACGATGATCTGAAGCGCGAGATAAGCGTCCTCAGATCCGTCGATCTGTCGCAAATACCGACCGGTGAGCCCGGCAAGAGCCTCGAACATCTTCTAATGGAACGGTCGAAGGCACTTCAGCAAGCCGAGGCGCTGAAGCCACCGAGCACGCCCGATGCACTCGGTGGACTAGCCTCACCCCTGCAGCGCGCCGCGACCGCTTCACCCCACGCTGGTGGTGGTGTAGGTGGTGCTGCTGGTGTCGTGATTGGTGGGAGTGCTGCACCGCCACCTACGTCCCTAGTTTCCTGTTCCCAACAAGCAATCCCGACACGTTCGACTCCAACACCCTCGTCGGTTACTTCGACTGCCTCGAGTCTCCTATTCCCTCCACCTCTCCAAAACGTCGAGACCTTTGGCTCTTTCCTCGGCGAGGAGATTGTCGCCAACTGGAGACGGTCCCTGGAGAGGTCAATAATgagccagcagcagcagcagcagcaacaacaacaacaacaacaagcacaacaacaacaacaacaacaacaacagcaacaacagcagcagcagcagcaacaacagcaacagcagcagcagcagcagcagcaacagcagcagcagcagcagcagcagcagcagcaacagcagcagcagcagcagcagcagcagcagcagcagcagcaacaacagcagcagcagcagcagcaacaacatcTAGCCCAACAGCAACACCAACAGCAACAATCACACCCACAGCAACAACCATTACTACCACAACCACAGACCCAAGCTCTTTCCCAACTCCAACAGTCGCAGCCCGTTGCTATTCAGCAAGCGTTGCAGCAGCAACACCAATCAATGCACGCGTTACATCCGCCAACGAACCTAAATCACCTTCCATCACCAACAGATAATCCAACCTCGTCGTCATCGGGATCGGTTACGAACACCCCGGCCAAGTCGAACACGCCGCAACTGGGTGGTAGCAGCGTGATGAGCGGCGGTTGTCTGGACGCAACGGAAAAGGCACCGACGCCGATACCCGGCCACGAGACACCAGCACCGCCGACACCGTCGTCAACGGTCGCTCTCACATCCCCGTCAGCGCCGATGGTCGTCAACTCTCTTCACCCACCGCAGTCGGTGACGACGATGCTCGAGACGATGCACAACAGCAATAACATTAACGGATCAAGCGTCGGAATGATGCCTGGTATCCTGCCGACGACACTTCCGCCAAAGAGTCCCCAGGAAGAATCCTGtcacaataacaacaacagtCATCATCTGGCGAACAACAACATCGGCGGTCTCAGTGTCCTCGACACCCTCAAGAGTCCCTTTCGCTTCGACGATCGAACCCATCCGTTCAGATTCGGTGACGAATTCGGGGCTGCCGGAATGGCCGGCAGACTCGGCGAGTCTCTCATACCAAAGGGCGATCCCATGGAGGCGAGACTCCAGGAAATGCTTCGCTACAACATGGACAAGTACGCCTCGCAAAATCTCGACACTCTTCATATCGCGAGACGCGTACGTGAATTACTGTCGATACACAATATCGGACAGAGGCTGTTCGCCAAATACGTTCTCGGCTTGAGTCAAGGGACTGTCAGCGAACTGCTGAGCAAACCCAAGCCCTGGGACAAACTCACGGAGAAGGGACGTGACAGCTACAGGAAGATGCATGGATGGGCTTGCGACGAAAACGCCGTGATGCTACTCAAGTCTCTTATACCGAAGAAAGAGTATGTTTCAGGCAAGGAGCAGGGTATGCCGGCTTTCGGACGAGGTTCGCAGGACGGCGGTCCGGCCGACATGAGCGACGAGAGGCTGGCGCACATACTTTCGGAATCTGGACACTTGCAGATGAGCCGGGGCGAGCACGACACGTCGAACGACGCCGACAGCAAGAGCCCGAGCAGGCTCGGTTGTCCCAGTCCGTTCGGCAAGGACAGGATGGACAGTCAGAACAGGAGATTGAAGAAGTATGAGAACGACGACATTCCCCAGGAAAAAGTTGTGCGAATATATCAGGAGGAATTGGCGAAACTCATGGGCAGACGAGTCGACGATATTCGAGGTCCGCGCGATTTTCCGCCAAGCGCGATGTTTCCGCACTTTTTCAGCGGCGCCCAGGGTTTCCAGGGCATGGAGAGGACGCAGGAGGAGATTCGACTGGCGTTGGACGCTTATCACCGCGAGCTTCAGAAGCACAACGTTACGCCAGGTCAGAACGCCGCGCTGGCCGGACTGCCCGGTCTTCCGAGTTTGTTGGCCCTTCAGCAACAAGTACTCCAGCAGCATCACATGGCCGCGAACGGCGGAGGTGTTCAGGATCTGAGTTTGGGCAAGGTCGATCCGCGGAACAAAATAATGAACGGCGTCTCGGAAGAGGAGAAGGACAAGATGGAGGAGGCTATGAGGCACGCGGGAAGCGCATTCTCGTTGGTGCGACCAAAGCAGGAACCGAGCGGACCCCAGTCGACCCCCGGTGGCTCGAGTGCAAGCTCGCCACTCGGCAATTCCATTCTTCCACCGGCGATGACGCCGAGCGAAGAGTTCTCAGGAGCCGCGGCGGCGAGTCCGCTCCAGAGGATGGCCTCGATAACGAACAGCCTCATCAGCCAACCGTCCACACCGACGCATCATTCGGCGAATCAGAGGCCCCTAAAAGCCGTACTACCACCAATAACTCAGCAACAATTCGACATGTATAACAATCTGAACACCGAAGACATCGTGAAAAGGGTAAAGGAGCAGCTCTCGCAGTACTCGATTTCGCAGCGTCTTTTTGGGGAATCCGTGTTGGGATTGTCTCAGGGTTCGGTTTCAGATCTCCTAGCTCGGCCAAAGCCTTGGCACATGCTCACGCAGAAAGGCCGGGAACCTTTCATTAGAATGAAGATGTTCCTCGAGGACGACAACGCTGTTCACAAACTGGTAGCGAGCCAGTACAAAATCGCACCGGAGAAGCTCATGAGGACCGGCGGCTACGGCGGCCTGCCTCGTAAGTTTAACTCAGCATGCGGAACCCCGATGAAACCGATGCCCCCGACAAAATTAGTCCAAGAGCAGTTGCAGAACGCAGCGAAGGCTCAGGCAGCGGCGCAGGCtgcagcggcggcagcggcggccCAGCATCAGCAGGAGGCGCAGATGCAGCTTGGTCCACCGCAACCCTCGCCGCAGCATCAGTCTCATCCCCAGCCACCGCCGCCGATGATGCTGACGCCGCCGGGCCACCATCCTCACGCTCAACTCAGCATCCAGGAGTTGCAAAagaagcaacagcagcagcaacagcagcaacaaatGGGTCTTCACTCGCCACATCATCAAATTGCGCCGTCGCCTCTACGCGGTCTTCACCCTCACATCTCCTCGAGCGTCTACGAGCTGGCGGCGCTCACGCCCGACCTCGACACTCAAACGATAACGACCAAGATAAAGGAGGCTCTCCTGGCCAACAACATTGGCCAGAAGATCTTCGGCGAGGCGGTTCTCGGTCTCTCGCAGGGTTCGGTCAGTGAGTTGCTCAGCAAACCAAAGCCCTGGAACATGCTGAGCATAAAAGGCCGGGAGCCCTTCATCAGGATGCAACTCTGGCTGACCGACGCTCACAACGTCGACAGACTTCAGGCCCTgaagaacgagagacgagaggcgAACAAGAGACGACGTAGCAGCGGTCCCGGACACGACAACAGCTCGGACACCTCCAGCAACGACACGGCGGAATTTTATCACGCCGCCTCGCCGGGCCCCGGACCTACCTCGGCGAAGAAGCAGAGAGTTCTGTTCTCCGAGGAGCAGAAGGAGGCCCTCAGGCTCGCCTTCACGCTGGATCCTTATCCGAACGTCGCTACCATAGAGTTTCTCGCCGCGGAATTGGCCCTGTCGTCGAGAACGATAACGAATTGGTTTCACAATCATCGAATGCGACTGAAGCAGCAGACTCCCCACGGTCAGCCGGAGCCTCAGTCGCCGAGGGAACCCGGTCAACCCTTCGATCCAGTGCACTTCAGGCTCTTGCTCAACCAAAGACTATTGGAAATTCACAAAGAGAGACTCGGCCTTGGCAACGTGCCGATACCGTACGCGCCCTACTTCAATCCAAACATCGCGACTCTGATGAACAACGCCCTCAAGGAGCAGTGCTCGGGCCTCGACCTTTCGATGGGATCGCTGAAGAGGGAGCCCAATCAGGAgttcgaggacgaggacgacgcaATGAGCAATCTCGGGAGCGAAGACTCCGAGGGCTCGGCCGGTAGCATGAAGAGAGAATCGACGGATCTAAATCAAACCCCGGCGCCGACGACCGCGAGATCGAACAGGCGAAAACCCGCGGCCCCACAGTGGGTAAATCCCGAGTGGCAAGAGCCAGCGAGAACCGGCGACGAAGTCATCATCAACGGTGTTTGCGTCATGCAGACCGATGACTACGGAGTCAAGAGGGAAACCGAGGAGACTGTCAGGGTCGAGCCCACACCCGTGCAGGACAGATACGAGGAGGACGCTCAGAGCGACGCATCCTCGGTGGCTTCGGGCAACAACGCACAGGATCGCGAGAGTCCCCTCCCAAGCCCAAAACCCAATCACAGCAGTCCGGTAACGTCACCGGCACCACCGTCCTCGCAACAGACGCAACAGAGCACCGAAGAAAGTCCGAAGGACATCGTGAAAAACGAGCCCGAAGAGACGTGGGATTACTAG
Protein Sequence
MPGIKKRGWYEQGSAGTEISQLVEEVSRLQQSLQRLQETSAQATSRLEEELEARRQHITRLESKLERQRDYDDLKREISVLRSVDLSQIPTGEPGKSLEHLLMERSKALQQAEALKPPSTPDALGGLASPLQRAATASPHAGGGVGGAAGVVIGGSAAPPPTSLVSCSQQAIPTRSTPTPSSVTSTASSLLFPPPLQNVETFGSFLGEEIVANWRRSLERSIMSQQQQQQQQQQQQQAQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHLAQQQHQQQQSHPQQQPLLPQPQTQALSQLQQSQPVAIQQALQQQHQSMHALHPPTNLNHLPSPTDNPTSSSSGSVTNTPAKSNTPQLGGSSVMSGGCLDATEKAPTPIPGHETPAPPTPSSTVALTSPSAPMVVNSLHPPQSVTTMLETMHNSNNINGSSVGMMPGILPTTLPPKSPQEESCHNNNNSHHLANNNIGGLSVLDTLKSPFRFDDRTHPFRFGDEFGAAGMAGRLGESLIPKGDPMEARLQEMLRYNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDENAVMLLKSLIPKKEYVSGKEQGMPAFGRGSQDGGPADMSDERLAHILSESGHLQMSRGEHDTSNDADSKSPSRLGCPSPFGKDRMDSQNRRLKKYENDDIPQEKVVRIYQEELAKLMGRRVDDIRGPRDFPPSAMFPHFFSGAQGFQGMERTQEEIRLALDAYHRELQKHNVTPGQNAALAGLPGLPSLLALQQQVLQQHHMAANGGGVQDLSLGKVDPRNKIMNGVSEEEKDKMEEAMRHAGSAFSLVRPKQEPSGPQSTPGGSSASSPLGNSILPPAMTPSEEFSGAAAASPLQRMASITNSLISQPSTPTHHSANQRPLKAVLPPITQQQFDMYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAAQAAAAAAAAQHQQEAQMQLGPPQPSPQHQSHPQPPPPMMLTPPGHHPHAQLSIQELQKKQQQQQQQQQMGLHSPHHQIAPSPLRGLHPHISSSVYELAALTPDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWNMLSIKGREPFIRMQLWLTDAHNVDRLQALKNERREANKRRRSSGPGHDNSSDTSSNDTAEFYHAASPGPGPTSAKKQRVLFSEEQKEALRLAFTLDPYPNVATIEFLAAELALSSRTITNWFHNHRMRLKQQTPHGQPEPQSPREPGQPFDPVHFRLLLNQRLLEIHKERLGLGNVPIPYAPYFNPNIATLMNNALKEQCSGLDLSMGSLKREPNQEFEDEDDAMSNLGSEDSEGSAGSMKRESTDLNQTPAPTTARSNRRKPAAPQWVNPEWQEPARTGDEVIINGVCVMQTDDYGVKRETEETVRVEPTPVQDRYEEDAQSDASSVASGNNAQDRESPLPSPKPNHSSPVTSPAPPSSQQTQQSTEESPKDIVKNEPEETWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01394913;
90% Identity
iTF_00905317;
80% Identity
iTF_00058574;