Basic Information

Insect: Amblyjoppa fuscipennis
Gene Symbol: Prdm15
Assembly: GCA_963575735.1
Location: OY754491.1:28337514-28345123[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 4.1 3.8e+02 2.3 0.0 2 23 253 274 252 274 0.93

2 14 0.013 1.2 10.2 4.6 3 23 283 304 282 304 0.96

3 14 0.00013 0.012 16.5 0.7 3 23 467 487 465 487 0.97

4 14 0.0092 0.84 10.6 0.2 1 20 491 510 491 511 0.94

5 14 3.2e-05 0.003 18.3 1.7 1 23 521 543 521 543 0.98

6 14 0.38 35 5.5 1.2 2 21 548 567 548 568 0.94

7 14 3.5e-05 0.0032 18.2 5.5 1 23 572 594 572 594 0.96

8 14 9.1e-06 0.00083 20.1 1.0 3 23 616 636 614 636 0.97

9 14 0.41 37 5.4 2.9 1 23 641 663 641 663 0.96

10 14 0.005 0.46 11.4 0.1 2 23 669 690 668 690 0.94

11 14 0.0066 0.61 11.0 6.2 2 23 696 718 695 718 0.94

12 14 0.0002 0.018 15.9 4.0 1 23 724 746 724 746 0.96

13 14 0.0031 0.29 12.1 7.8 1 23 752 775 752 775 0.96

14 14 0.052 4.7 8.2 4.7 1 23 780 803 780 803 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	4.1	3.8e+02	2.3	0.0	2	23	253	274	252	274	0.93
2	14	0.013	1.2	10.2	4.6	3	23	283	304	282	304	0.96
3	14	0.00013	0.012	16.5	0.7	3	23	467	487	465	487	0.97
4	14	0.0092	0.84	10.6	0.2	1	20	491	510	491	511	0.94
5	14	3.2e-05	0.003	18.3	1.7	1	23	521	543	521	543	0.98
6	14	0.38	35	5.5	1.2	2	21	548	567	548	568	0.94
7	14	3.5e-05	0.0032	18.2	5.5	1	23	572	594	572	594	0.96
8	14	9.1e-06	0.00083	20.1	1.0	3	23	616	636	614	636	0.97
9	14	0.41	37	5.4	2.9	1	23	641	663	641	663	0.96
10	14	0.005	0.46	11.4	0.1	2	23	669	690	668	690	0.94
11	14	0.0066	0.61	11.0	6.2	2	23	696	718	695	718	0.94
12	14	0.0002	0.018	15.9	4.0	1	23	724	746	724	746	0.96
13	14	0.0031	0.29	12.1	7.8	1	23	752	775	752	775	0.96
14	14	0.052	4.7	8.2	4.7	1	23	780	803	780	803	0.95

Sequence Information

Coding Sequence: ATGCTACGTTTAAAGAAGCCGACGATAACGACGAATAAtccggccagggaagacaccgAGAACAGTAAGAAAAACGCGAGCGAGACATACTATACAGcaTGCAACATTTGTGGCAGAGAGCATGACGCCAGaaactgtacattttttccgGACTTCCAACATGTCAAGGACGAGCCGATTCTATCCAGAGCAAGGCAGACGCTTCCGAAGGATTTGGAGATCACTAGAATGGCCGACGACTCCGTCGCAGTTGTGGCAAAACGAGAGTTTCGGCAGGGCACAACCTTCGGCCCTTTGCAGGCCAGACGAGACTGGGCCATGAATCCTATGACGAGTTTTCCCATAAAAGTTTTCGGCACGGTTCCAACCGATACTTACCACTTGGATTACTCCGACGAAGAAACTTCCAACTGGATGTGTTTTGTAGTTCCCGCAACGAGCGCACGTGAGCAGAATCTTGTCTGTTACCAGGTCGAGAGGGAGATATTTTACACGACAATGCACTCGATAGCCGCGGGAGAGGAGCTTCGAGTTTGGTACGCGCCTTGCTACGCCCAGAAAATGAAGATGCCGCTCTACAACTTAGAATTCGCGAACGTCGTCGCGACTGTACCGACTCCCGAGATCGAGgaattaccgaccgagccggaGGAGAATAAAAACGATCGGGCGGAAATCTCGAGCAACGATATACGGGAGATCGCCGAACGCTTGCCAGCCGAGCATTTGGGAGCTCCCAAGGACAGGGCGAATTGGAACTGCAGAATATGCTCGATCGTCGTACCGTCGGTGATCGCGTATGCGAAACACCTGATGGAACACTACAAACCGCTTCTGGGCGTATTCTGCGATATCTGCAACAAAAAGTTTCACAGATTGACGGTTTTGCAGAAACATAAGCGCCTGAAGCATCCGGAGGGTGTATCCGCGAGCGACGTTGTCGGTATACCGACGTCGGAAAATCAACAGTTGCAGAACGCACAGACGATTCTCATGAACATGAACGATTCCGAGGGTCAAACTTCGAAGGCGATGAAGGAAATACTGGAGAAGTTTAAAGCCGGCAAAGCCATAACGGAGAGCAGTTTGTTGCTGCCGTCCATGGACACCGAAAAGGAGAATCACAACGACTTGCCTCTGTTGGACACGAATTCGATAAACGTGAATGATCTTTTGCAAAACAACGGAACGCTGTTGGAGAACTCGTCGCTGAAATCCATCCTGGAGAATCAATGCCTGAACATGAATCTCGGACTGGGAACTATCACCGATTCGATACTCTCGGAGAACATCGCGGGCGTTGATTCGGTGAAGTTCAACGTCGAGGAATTGGCCTCGGACCTGCTGGACATCACTCCCGACGTCGAGAATATTAATCGCAGGGTCGATAATCTCGACTGCGATATATGCGAGAAGAAATTCGACAAGGTCGATTATCTGTATAGGCACCTGAGAAAACACACCGGAGAATTTATCTGTCCGGGGTGCCTAAGTGTATTCGCGAGAAAGGAGAACTTAGTATCGCACGTGTGTCCCTCGCAAAAGCCCGAGCAGCGGAATTACGAGTGTCTCTACTGCCAGAAGCCTTTCGTACTGAAGAAATATCTCAAGCGCCATATGGTCAAACACACCGAGTCGAATACCTGCAAATGGTGTCACGATCTCTTCGATTCTCGTACGGAACTCGAGGCTCACATGTGCGAAGCTCCGAAGCACGTTTGCTCGCAGTGCGGCAAGCGTTTCGTCCATAGGGCTCATCTGAATCGTCACGCGAAATTGCACGTCGATCCGAAGCCGGTCGCAAAGAGGATAAGGAAACCGACTCTGGTTGACAAACCAGTAATCTGCGAGAAGTGCGGCGATGTCTTCAAGAATCCTCATAATTTAAAGCAACACTTACGAtcgcacgGTGAAAAGAAATTCGAGTGTGACGTTTGTCACAGCAGATTTCACAGGATCGGCGTACTGCAGCAGCACAAGACGATACACCAGATCGTTCAGATACCGTGTCAGGTctgcggaaaaaaattgaagagcaAAAAAGCTTTGGGCGTTCACGTTCTCCTGCACGGAAACAAAAAGATTCATTGCGAAAAATGCGACAAAAGCTTCTTTCAAAGATGCAACTACCTCAAGCACTACAAGCAAGTCCACTGCGACAAAGTGACTCACAAGTGTCCACACTGTCCGACGCAGTTCACGAGCGAGCAGAATTTCAACAGACACGTGGAGAATCACGTCAAGCCGGCCGAGCACTCTTGCTCCTCTTGtcacaaagtttttcatcGAGAATATCAGCTGAAGCGTCACGTTCAGTCGAATCACAGTGGTATAATATTCCGTTGTCCTTATTGCAAGATGACTGCAAGATACCGGCACAGTATGAGACGGCATTTCGAGCGTCAGCACAAGAATCTCAGCGACGACTGGAACAAGCCCGGCTTCGTGAACGATCTCATCGAAAAAACATCACCCGCTCTGCTCGTACAGCAAGACAAGTCAAAAGATCAGGCGAACCCGGCGATGAAGGTAGCTTATGGTGGAGACGTTAACGCCGTGGAGCCTCGCGAAAATTCCGAAGGCTTGGTATTGTCCGTGGCTGGATTGGAGAGAGATCGAATTGTCGATCGGACGGAATTGCCGGTCGAGCATATCGTCGGTCACATCGACCAGAGTTCGCTGAACGGTCAGGAGATTCTGCTTCAAGTCTCAGAGATCTGTCCGTCCGAGTCCGCTCTCGAGAGCTGCGAATTGTCGTCGAACGAAGTACCACAGCTGAGTATCAGCGACTCGGATGCTCATCTCGCCGAGTCGGTGCTGGGAAACGCTTACATCTTCGGCGAGAACGGAGGCGATATTATGTTTTATGTTCTTGACAATACTCCGGTCATTGCCGACTACTGA
Protein Sequence: MLRLKKPTITTNNPAREDTENSKKNASETYYTACNICGREHDARNCTFFPDFQHVKDEPILSRARQTLPKDLEITRMADDSVAVVAKREFRQGTTFGPLQARRDWAMNPMTSFPIKVFGTVPTDTYHLDYSDEETSNWMCFVVPATSAREQNLVCYQVEREIFYTTMHSIAAGEELRVWYAPCYAQKMKMPLYNLEFANVVATVPTPEIEELPTEPEENKNDRAEISSNDIREIAERLPAEHLGAPKDRANWNCRICSIVVPSVIAYAKHLMEHYKPLLGVFCDICNKKFHRLTVLQKHKRLKHPEGVSASDVVGIPTSENQQLQNAQTILMNMNDSEGQTSKAMKEILEKFKAGKAITESSLLLPSMDTEKENHNDLPLLDTNSINVNDLLQNNGTLLENSSLKSILENQCLNMNLGLGTITDSILSENIAGVDSVKFNVEELASDLLDITPDVENINRRVDNLDCDICEKKFDKVDYLYRHLRKHTGEFICPGCLSVFARKENLVSHVCPSQKPEQRNYECLYCQKPFVLKKYLKRHMVKHTESNTCKWCHDLFDSRTELEAHMCEAPKHVCSQCGKRFVHRAHLNRHAKLHVDPKPVAKRIRKPTLVDKPVICEKCGDVFKNPHNLKQHLRSHGEKKFECDVCHSRFHRIGVLQQHKTIHQIVQIPCQVCGKKLKSKKALGVHVLLHGNKKIHCEKCDKSFFQRCNYLKHYKQVHCDKVTHKCPHCPTQFTSEQNFNRHVENHVKPAEHSCSSCHKVFHREYQLKRHVQSNHSGIIFRCPYCKMTARYRHSMRRHFERQHKNLSDDWNKPGFVNDLIEKTSPALLVQQDKSKDQANPAMKVAYGGDVNAVEPRENSEGLVLSVAGLERDRIVDRTELPVEHIVGHIDQSSLNGQEILLQVSEICPSESALESCELSSNEVPQLSISDSDAHLAESVLGNAYIFGENGGDIMFYVLDNTPVIADY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00721493;
90% Identity: iTF_00721493;
80% Identity: -