Basic Information

Insect: Amblyjoppa fuscipennis
Gene Symbol: -
Assembly: GCA_963575735.1
Location: OY754493.1:23678530-23686038[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.00018 0.016 16.0 0.3 2 23 826 847 825 847 0.97

2 17 0.52 47 5.1 0.2 1 19 853 871 853 874 0.88

3 17 0.53 48 5.1 0.9 2 23 880 901 879 901 0.95

4 17 0.0012 0.11 13.4 1.9 3 23 910 931 909 931 0.98

5 17 0.0032 0.29 12.0 2.0 1 23 938 961 938 961 0.95

6 17 0.00015 0.013 16.3 0.8 1 23 967 990 967 990 0.94

7 17 0.54 49 5.0 0.2 2 23 998 1018 998 1018 0.94

8 17 2.1e-07 1.9e-05 25.2 0.8 2 23 1024 1045 1023 1045 0.97

9 17 2.7e-06 0.00024 21.7 0.2 1 23 1051 1073 1051 1073 0.99

10 17 0.0091 0.83 10.6 2.8 2 23 1085 1107 1084 1107 0.95

11 17 0.54 49 5.0 2.6 1 23 1113 1136 1113 1136 0.92

12 17 0.0067 0.61 11.0 2.0 2 23 1158 1180 1157 1180 0.95

13 17 0.0011 0.1 13.5 1.0 2 23 1187 1209 1186 1209 0.96

14 17 0.00022 0.02 15.7 2.3 2 23 1217 1238 1216 1238 0.96

15 17 0.0014 0.13 13.1 2.3 1 23 1244 1267 1244 1267 0.96

16 17 0.39 35 5.5 3.2 2 23 1274 1295 1273 1295 0.96

17 17 0.011 1 10.3 2.6 1 23 1301 1323 1301 1323 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.00018	0.016	16.0	0.3	2	23	826	847	825	847	0.97
2	17	0.52	47	5.1	0.2	1	19	853	871	853	874	0.88
3	17	0.53	48	5.1	0.9	2	23	880	901	879	901	0.95
4	17	0.0012	0.11	13.4	1.9	3	23	910	931	909	931	0.98
5	17	0.0032	0.29	12.0	2.0	1	23	938	961	938	961	0.95
6	17	0.00015	0.013	16.3	0.8	1	23	967	990	967	990	0.94
7	17	0.54	49	5.0	0.2	2	23	998	1018	998	1018	0.94
8	17	2.1e-07	1.9e-05	25.2	0.8	2	23	1024	1045	1023	1045	0.97
9	17	2.7e-06	0.00024	21.7	0.2	1	23	1051	1073	1051	1073	0.99
10	17	0.0091	0.83	10.6	2.8	2	23	1085	1107	1084	1107	0.95
11	17	0.54	49	5.0	2.6	1	23	1113	1136	1113	1136	0.92
12	17	0.0067	0.61	11.0	2.0	2	23	1158	1180	1157	1180	0.95
13	17	0.0011	0.1	13.5	1.0	2	23	1187	1209	1186	1209	0.96
14	17	0.00022	0.02	15.7	2.3	2	23	1217	1238	1216	1238	0.96
15	17	0.0014	0.13	13.1	2.3	1	23	1244	1267	1244	1267	0.96
16	17	0.39	35	5.5	3.2	2	23	1274	1295	1273	1295	0.96
17	17	0.011	1	10.3	2.6	1	23	1301	1323	1301	1323	0.98

Sequence Information

Coding Sequence: ATGAGTGTTTCCGAGGAAGGCGTATTGTACTTTACAATCGAGGATGATAACGACGGCTCTTTGCAAAACGACAGCGACAATCTGACCGAGGAACAATCGCACGCCGCGCTTATCGAGGATCTTACCTCGGAGAATGTTGTTATCTTAAACGACGGTGTGAAAGTAGATGGAAGGACGCGCAAGGGCACGGCGGAACGTCAGCCACGAGACAATGTCGTTGCGGTCGGGGCTGCAGAGATCAGAGGATACAACATCGTCGAAGTCACCGCAGGTTCGGCCCAAAAGGACATCCGTACGAGACCGTCGATGAAGTCCGAGAGACGAGATCACGACTACAGCGATGTTCCCTCCGCCGGAAGTCGTGGCTCGGCTCAAGCGAACGCGCGACCCTCGGCGAACAACAATGCGTCGCTGCTCAGATCCGCGGAGCACCGAACGCCGTCACCGACTCGTGAGAGATCGATCAGTCGTGTCAAAAACATAAGCGAGCTGAAGAAAGTAACTCCGAGAGTGAAGCTCAtgtcaccggaagtgacgagctTGACGCGACTGACGACGAAGATGAGCGTTCCGACGCTTTCCCCTCCGCAGAGCAAACAGCCGAGCGCGGACGCCTCGCACCAGACCTTAAAGAACTACTGTCGAACCTGCGCCGGTCTGAAGCTCCCGCTCGTCGACATATTCAGCGAAAAGGGAATGCAAATGCGGCTCAACCAGCAGATGAAGCACCTCGAAGAGATAAACAAGCACGACAGTCTCTCAACGCAGATGTGCATGGACTGCATATGCGATCTGAAGATGAGCTACAAATTTTTCATGCAGATAAAGAAGGCTCAGGTGAAGCTGCAGTCGATCCACGCCTCCTTCCAGGCCTCCCCGACGAGCTCCTCGCGAGTCTCTGAGAACGAGCGCTCGGACCCGGCGAAGCCCGCCTCGAAGAGCCGCGCGACTTATCCGCCGAGAAAACCGGAAGCGGAGAAATCCGAGGTCGCGGCTCGATTGCCGAGTCCGCAGCCGCCCGAAACGCCGGTCGAGAACAAGAGCGATCGAATCATCGATGTTCAGCGGATAAAGGTCGAGTCGGAGAGCGAGGACGAGTCGGCTTACCGGCAGAGCGACGACAACGACTCGATAGAGGAGTTCGACCCGGACGATCCGTCCTGCCAGCCCGACTCGTCGGACCCGGCCCATTCGGACGGCGAGTTCGTCGCCGAGACCTCCGAAAATTCGCAAAGCCTCGAGAATTACGAGAGTCAGAGCATGGAGTACACGCAGGCGTCGTCGGAGCTCGTCGAGGAAAATCTGGCGCCGAGCGTCCCGACGAGGCAGGACTCGAAAGCGGAGCCGAAGAAAGATGCGAGCAAAACCGTTTATCAGTACGACACGGCGCTGAAGGCCTACGTGAAGGTCGAAGCGACCGAGGCGAACGACTGCACGAGTCCATCGTTGATAAAACCTAAACTTGAGCGCGAGCATTCTCTCGAGTGCTCGAAGGAGGTCGCCAAACAGCCGAACATCCTCAAGCGAAAAATCCCGGCCAGGAAGGATTTTTTAGGGAATCCCGTGGCGAGCGTAAGTACGTCGGATTCGACGTTCGCCAGATCGGGACaaaaagagacgaaaaaaccAAAGCTCAACGTTGAGAACGCTCTCAACATAacgaacgagaacgaggacgggATAATGTACGTGACGGTGAAGGGAACGAAGCCGAACGAGCTTCTTCTCGTGAAGGtgaagaaaatggaaaaaccgGACGGCAAGCGAGACGACAAGAAAAAGTCTCTCGAGGCCGTGCCGGTGGAGAAGATTCTGAAGAAGCTCGAACCGTACGCCGCTAAGGACAAGGACTTCACGACCGAGCGCTCGAAGGCCCTCGGCATACGCGAGCAGATTATCGAGGAGCAGATCGAGGAGTACAAGAAGAAGCGCGAGAAGTTCCTCGGCGGAACGGCGAGTCTGCCGAACGCCCTGAAGTTCGAGGACGGTCTGATACGCTTCGTGAATCCCGTCGACAGCGGAACGGACGGCGGTGTTAGAATAAAGGTCGAGCCGAGCGAGGAGATCGAGGACATTCGCCGGATCGTCGGTTCGCGCGAGGAGCGCCGCGACGAGCCCGAAAAATCCGAGAGCTCAAGATACGACAACACCGGCGAGTATCTCTCGCGTCTGGCGAAGTTAAAGAGAAAGTGGGAggaggcgaagaagaagaaggaatcGCTTCAGCGCGAGCTCGATCAATCGTACACCGAAGGAAACATGGAAAAGCTCGCTCGGATTCTCGGCGAGAAGGAGAAGAATCTTCAGGATTTTCAGGAGTACCTCAAGCAGCGGAAGATCGTTATAACTCGACTGAAAGACGAGGACATAATATCGCTCTACGAGGATCGCAACAACACGTCCCTGAAGAGAAACTTTCCCGATCTGATTGACGAATCGACACCGTCCGATTACATCGAGAAGCAGAATTACCTCGAGTGCGATTACTGTCCGGAGACTTTCGCGCATCGCGACGTTCTCGAGGAGCACCTAAAGTCGCACGACTACAAGCTCATGTACTATTGCGAGGACTGTCAGGCGGAGTTCTCGACGATAAAGCTGAAGAGAGCTCACAACGTCACTTGCATGAAGAAACTCATATGCAAGTACTGCGATCTCATGCTCGACTCGAAGGGGAAGAAGCGCCAGCACGAGCAGAAGCACGTCGACAGCATGTACGGCCAGCTGTGCGACGTTTGCGGCGAGAAGTTCAAGCACCAGGGCACCCTCGATCAGCACTTCAAGACCCAGCACATGACCTGGGAGAAGATCTACCAGTGTCCTAAATGCCCGAAAAAATTCGCCTTCAAGCAGAAACTCAGCTTCCACCTCAAGTCGGTACACACGACTCTGCGCGCTTTTCTCTGCGAGGACTGCGGCGCCGATTTCAAGAACCCGGCCTCGCTTCGACATCACCGAATACGCAAGCACCAGCCGACGGGCAACAAGCGCGAGTGCCCGGTCTGCAACAAACTCGTGCCCTTCTACAGCCTCTCCAAGCACATGTACACGCACAAGGCCTACACGATTCAATGTCCGAACTGCGATAAGATGTTCAAGAACAGCTCTACGCTCAAGCAGCACGTGAGGATCCACGAGGACCAGCGGCAATATCGATGCGACACGTGCGGCGTCGGATTCAATAGGCGCGACGGCCTGAGACTCCACATGAGGGTCCATCAGAAGAGCGACAGTCGAGCCCTCAAGGAATGCTCCTGCCAGGTCTGCTCCGAAAAATTTCCCAACCACTCGATGCTCGTCATTCATCGGAACAGAGTTCACAAGGACGGAAGACAGTACACTTGCCACATATGCAACAGGTCGATGCTCTCGACGAGGTCGCTCGAGTGGCACATGTCGCACATTCACAACGAGGTTCTGCCCGGCGGCCCGCGGGACGAGTCCGAGAGCATGCCGGAGAAGAAGAGAGTCTCGTGCGTTCACTGTGACAAGACCTTCAAGACGGAGATGATCCTGAGGACTCACATAAAGAACACCCACATGGAGAAGGATCCGACCAAGTGTCTCGACTGCGACCTGACCTTCACCTCGGACGTTCGACTGCGACATCACATGATGGTTGCGCACAACAGGCTCGAGGGAACACTCTCGTGTCCCCACTGCTCGAAGCGCTTCGTCAATCAGCTCAGGCTGAAGACCCACATGATATCGCACTCGGAGGACCGGCCTTACACCTGCGAGATTTGCGGCTTCAATCTCAAGACGAAGATACAACTGATAAAGCATCATCAGAATCGTCACAGCGACGAGAGACCACTTCAGTGTCGCTACTGTCCATGGCGATGCAAACAGGTCAGCGCGCTCGTCTGCCACGAGAGAACTCACACGAACGAGAGGCCCTACTCGTGCTCGGTATGCAGGCAGAGGTTTAAGTACCTCGGCGACAAGAACAAGCACGAGAGGAGGCACGAGATTCTCGGCGGTTCGGGATTCAAGAGAATCGTCGCCGGGAGGAACCTCAAGACGCCGAAGATTCAGCTGGAGGAGACCTCGACCTCGGAGCAGGATCAGGTGGAGTACGAGAATCAGGAGGACGAGGAGCAGCTCACCGAGGAACAGCAGTACGAGGAGGAACAGCGGTACGAGGAGGAGCAGCAATACGAGGAACAGCGGGACGGGGAGTTCGACGGGGACAAGTTCGACGAACAGGAGATCGTTAAATTCGAACCCGAGGACATCGGCGAGGAGTACGAGCAGACGTACGAGCAGGAATACGAGGAAACGTCGAGGGAAGCTTCGGAGGCTGCGGAGGTGATAATGAATATGGAAGATACGACGGTGTACACGGAAGAGGTAACGGCCGACAATATCGAGACAGCGGAGATGATGTCGGAGGAGATAATGACGAATCGGATACTGCAGTCGGGTACGGTCGTTCATCTGGAGCAACATGACGACACGGGCAAAATCCAAGTGATACCCGTTATGCTTTCGTTGCCGGACCTGAGTGACTCCAGTGCGGAAGTTAATCTGGCCACCGCGTCGATAATGTATAATAACTGA
Protein Sequence: MSVSEEGVLYFTIEDDNDGSLQNDSDNLTEEQSHAALIEDLTSENVVILNDGVKVDGRTRKGTAERQPRDNVVAVGAAEIRGYNIVEVTAGSAQKDIRTRPSMKSERRDHDYSDVPSAGSRGSAQANARPSANNNASLLRSAEHRTPSPTRERSISRVKNISELKKVTPRVKLMSPEVTSLTRLTTKMSVPTLSPPQSKQPSADASHQTLKNYCRTCAGLKLPLVDIFSEKGMQMRLNQQMKHLEEINKHDSLSTQMCMDCICDLKMSYKFFMQIKKAQVKLQSIHASFQASPTSSSRVSENERSDPAKPASKSRATYPPRKPEAEKSEVAARLPSPQPPETPVENKSDRIIDVQRIKVESESEDESAYRQSDDNDSIEEFDPDDPSCQPDSSDPAHSDGEFVAETSENSQSLENYESQSMEYTQASSELVEENLAPSVPTRQDSKAEPKKDASKTVYQYDTALKAYVKVEATEANDCTSPSLIKPKLEREHSLECSKEVAKQPNILKRKIPARKDFLGNPVASVSTSDSTFARSGQKETKKPKLNVENALNITNENEDGIMYVTVKGTKPNELLLVKVKKMEKPDGKRDDKKKSLEAVPVEKILKKLEPYAAKDKDFTTERSKALGIREQIIEEQIEEYKKKREKFLGGTASLPNALKFEDGLIRFVNPVDSGTDGGVRIKVEPSEEIEDIRRIVGSREERRDEPEKSESSRYDNTGEYLSRLAKLKRKWEEAKKKKESLQRELDQSYTEGNMEKLARILGEKEKNLQDFQEYLKQRKIVITRLKDEDIISLYEDRNNTSLKRNFPDLIDESTPSDYIEKQNYLECDYCPETFAHRDVLEEHLKSHDYKLMYYCEDCQAEFSTIKLKRAHNVTCMKKLICKYCDLMLDSKGKKRQHEQKHVDSMYGQLCDVCGEKFKHQGTLDQHFKTQHMTWEKIYQCPKCPKKFAFKQKLSFHLKSVHTTLRAFLCEDCGADFKNPASLRHHRIRKHQPTGNKRECPVCNKLVPFYSLSKHMYTHKAYTIQCPNCDKMFKNSSTLKQHVRIHEDQRQYRCDTCGVGFNRRDGLRLHMRVHQKSDSRALKECSCQVCSEKFPNHSMLVIHRNRVHKDGRQYTCHICNRSMLSTRSLEWHMSHIHNEVLPGGPRDESESMPEKKRVSCVHCDKTFKTEMILRTHIKNTHMEKDPTKCLDCDLTFTSDVRLRHHMMVAHNRLEGTLSCPHCSKRFVNQLRLKTHMISHSEDRPYTCEICGFNLKTKIQLIKHHQNRHSDERPLQCRYCPWRCKQVSALVCHERTHTNERPYSCSVCRQRFKYLGDKNKHERRHEILGGSGFKRIVAGRNLKTPKIQLEETSTSEQDQVEYENQEDEEQLTEEQQYEEEQRYEEEQQYEEQRDGEFDGDKFDEQEIVKFEPEDIGEEYEQTYEQEYEETSREASEAAEVIMNMEDTTVYTEEVTADNIETAEMMSEEIMTNRILQSGTVVHLEQHDDTGKIQVIPVMLSLPDLSDSSAEVNLATASIMYNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01364878;
90% Identity: iTF_01364878;
80% Identity: -