Basic Information

Insect: Amblyjoppa fuscipennis
Gene Symbol: salm
Assembly: GCA_963575735.1
Location: OY754488.1:40196822-40211226[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 6.1e-06 0.00055 20.6 0.9 1 23 443 465 443 465 0.98

2 9 1.2e-05 0.0011 19.7 2.1 1 23 471 493 471 493 0.98

3 9 0.076 6.9 7.7 3.8 2 23 936 957 935 957 0.98

4 9 5.2e-08 4.8e-06 27.1 0.6 1 23 963 985 963 985 0.97

5 9 7.3e-05 0.0067 17.2 2.6 1 23 995 1017 995 1017 0.98

6 9 0.0025 0.23 12.4 1.9 2 23 1367 1388 1366 1388 0.97

7 9 0.016 1.5 9.8 1.1 1 15 1394 1408 1394 1408 0.94

8 9 1.2e-06 0.00011 22.8 2.1 3 23 1613 1633 1611 1633 0.96

9 9 2.4e-07 2.2e-05 25.0 0.9 1 23 1639 1661 1639 1661 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	6.1e-06	0.00055	20.6	0.9	1	23	443	465	443	465	0.98
2	9	1.2e-05	0.0011	19.7	2.1	1	23	471	493	471	493	0.98
3	9	0.076	6.9	7.7	3.8	2	23	936	957	935	957	0.98
4	9	5.2e-08	4.8e-06	27.1	0.6	1	23	963	985	963	985	0.97
5	9	7.3e-05	0.0067	17.2	2.6	1	23	995	1017	995	1017	0.98
6	9	0.0025	0.23	12.4	1.9	2	23	1367	1388	1366	1388	0.97
7	9	0.016	1.5	9.8	1.1	1	15	1394	1408	1394	1408	0.94
8	9	1.2e-06	0.00011	22.8	2.1	3	23	1613	1633	1611	1633	0.96
9	9	2.4e-07	2.2e-05	25.0	0.9	1	23	1639	1661	1639	1661	0.98

Sequence Information

Coding Sequence: ATGCAGCTCATGAGATGGAGCATCACCCGAAGACTCGAGAGTCGCGGTGTCAATAAGCAGAGACGCGACGGATGTCAGAACGAGCACCAAAACTTGACGAACGGTTTCTCGTCGCCGAGATACTCCGAAgaagagaatgactccgcctCGGAGGGCGAGGAGAGCAACAACGGTGGTTGCAGTGTCGGTGTCGTCGGTggaatcgtcgtcgacgacgcggCGGTCGATCTCACGTCGTCGCGCTCCCACAACGAGGGTGACGAGGACGAGCGTGACCCGGAGGAGTTGCCGAtggaggaggacgacgaggatgacggtatcgtcgacgagatcgaggagcccgaggaggacgaggagggtTCCCGAAAGCAGATGCGTCATCGTCAGGACGCCGAGAACAACAACAGTTTCATCGGCGAGGGTGGTCCGGCGAGCGGCGGAATCGTCGGCGGAGGGGTCGCGGCCGGAGGTATATTTCCGCCGGCCGGCACGAGTCACGTCACCCTCGAGGCGCTGCAAAACACGAAAGTCGCTGTCGCACAGTTCGCAGCGACGGCGCTGGCCGGCGGTGCCGACAGCGAGGCGGCCCTCCAGGACCTCGCGATGCTGCAGAGCACACTGTACACGCTACAGCATCAGCAGGTCTTTCAGCTTCAGTTGATAAGCCAGTTGCAGCAGCAGCTTTCGATAACGCACGCGGGTCAGCCGGTAGGTCCGGTTCAGCAGGGTCTGAGCAGCACGAGCAGCGGCCCGACGAGCGAGGCTGTCGCGTCGATCGTCGGCATGACGAGCGGCGACGCGAGCAACCCGATCAAGGAGTCGTCATCCCCGTCGCCGTTGATCCACGCGAAGTCGCTGGCGAGCCTGACGTCGCCGCCGAGCTCGCGACCCCCCAGTCATCACCAgccctcgtcgtcgccgttgACGCCGAGCAGTCTTTCCGCCCAGGAACGGCCGGCCCTCTCGAGCAGCACGTCGCCGATATCGCTGCCACTGCCGGCAACCTCGACAATGTCGGCGTCGCCGGCGACTAGCAGCGCGGCGACGAGCCAGATACCAGTGCCGATGTCGCATCAGATGCAAATGTGCTCGATAAGCTCGTCGCTCGCCGCCTCGATAATAACAAACAACGATCCACCGCCGTTGCACGAGCCGAATACCCTCGAGATGCTCCAAAAGCGGGCCCAAGAAGTATTGGACAACGCGAGTCAGGGACTACTCGCTAACAACCTCGCCGACGAACTAGCGTTTCGGAGTGGCAAGGGTTCGCGCCTCTCGCCGTACGATTCCAAGTCCGGCGGTGGCCGCGGCGAGCCCTTCTTCAAGCATCGCTGCCGCTACTGCGGCAAGGTCTTTGGAAGCGACTCGGCACTACAGATCCACATTAGATCCCATACAGGTGAGCGTCCATTTAAATGCAACGTCTGCGGCAGCCGTTTCACCACCAAGGGAAATCTCAAGGTCCACTTTCAGAGGCACACCGCAAAGTTTCCACACGTTAAAATGAATCCGAATCCCGTGCCCGAACACCTCGACAAGTACCATCCTCCCCTGCTCCAGCAGTTAGCGGCGTCGGGTCAGAGGCCGATGCCGTCCCCGCCGCCTCCACCACCGCCGCCGCAaatgcagcagcagcagcagcagcagcagcagcaacagcagcagcagcagcatcacgCAGCTGCGGCCGCAGCGGCTGCAGCCGCTGCAGCGGCCGCTTCGGGAAACTTCCATCCTGCTGCCGTTGCAGCAGCGGCACACGGCTTTCTTCAGCCCCAGCCACCCATACCCCTGAGTCTCGCGATGACCGGTATGCCACCCCTTTACCGACCCCCAATCGTCAATCATCGCGACGATCAGGACATACCGGAGAACCTCACCAAGTCCGTTAACGCACCGGCGATATCGCCCCATTCGCCCGGACCGACGAGCGCCCAGCTCAACTCGCATCATTCCTTTcacgaacaacaacaacaacaacaacaacaacagcagcagcagcaactgCAACCGTCgggccagcagcagcagccccagcagcagcaacagctgCAGAAGACGAGCGATCGGCAATCACCGCGAGACGAGATCAAGCTCGAGCAGAGATCGCCGATCCAGGACTACCAGCCCCAGCGTCCGCCATCGCAGGACGGTGATGAGAGAATAACCCCCAAGAGAGAGCCCGAGGAGCCCGAGGAGGTCGCCGACGAGGACAACGACGAGTTCGACGAGGCGTCGAGGCGTTACCTCAATCCGTCGCCCTCGCCCGCTAATCATCCGATATCCCACGTGCAGTCATCATACGACGACTGCAGCATGGACAGCAAGATAAGCGGTCGTCTCGAGGCCGACGGCGAGATGATCGACGCCGACGAGGAGATGGAGGAGCAACCGGAGAATCTCTCGAGTCGCGGTGTCGGCGCCGCTATGAATCGTCTCGGTCAGCAGCAGGTTTCGACCCACGGCGGCGGTGGTTATCCCGGTGCATCGCCCGCGAGCAGCAGCGCGAGCAGCGGCAGTCTCCAGACCTCCTTCGCCGGTATTCTCTTTCCCGGACCACCGTCCCACCATCACCTGCCGCATCATCCGACATCGACGGCCGGCACGACGCCGACCGGAAGCGCCACCGGCAACGAGATGATGATCGATCCCGCGAGAGATCCGGCAATCTACTCGAGCCTCCTGCCGAGACCCGGCAGCAACGACAACTCCTGGGAGAGCCTCATCGAGATAACGAAGACATCGGAAACCTCGAAGCTCCAACAGCTCGTCGACAACATCGAGCACAAACTGACCGATCCTAATCAGTGCGTAATATGCCATCGGGTACTCTCGTGCAAGAGCGCCCTGCAGATGCACTACAGAACACACACGGGCGAGCGTCCCTTCAAGTGCAAGATATGCGGCAGGGCATTCACGACCAAGGGGAACCTTAAGACCCACATGGGCGTTCACCGTGCTAAACCGCCCCTGAGGGTCCTCCATCAGTGTCCCGTTTGTCACAAGAAGTTCACCAACGCCCTCGTCCTTCAGCAGCACATACGTCTGCACACCGGCGAGCCCACCGATCTCAGTCCCGAGCAGATACAAGCCGCGGAGGTCAACGAATTTCCGCCCAGCTATCCTCATCATCCCCTCACCTCGTTTCTCCCACAAGGTTTTCCGGGTCTTCATCCAGCGGGCCCGGGGTTTCCTTTGGGGTTTCCACCTTCGCGGCACCACGTCCTCGAGCGTCACCAGCTCGAGAACGACATAGACTCGAAGGAGCACCTTcatcagcagcaacaacagcagcaccatcaccagcagcagcagcagcagcatcagctgCGGTTGCAGCAGCAACAGGCCCAGCTTCAACGGAGATATCTTGAGGACGCTCACAGCGAGGACATGGAGGAccaggaggacgaggaggaggaccgGAGGGAGGACGATGAGAGGTGCGAGGACTTAAATCGCGAGAGAAGAAGCCTCGAGCCCGACGACGAAGAGCcgaacgacaacgacgacaacgacagcAGGAAGGAGATGTCCACCTCGGTCGCCGGCATGCCGACATTCTCGACTTCCCTCGCCGCCCTCGAGAACCAAGTCAGGACGATAACCACCACCGCCTCAGGCGGTATGATAAACAGCTCGTCGGCCTGCTCGCCCCCGCCCGTTCATCGGTTCAACGGCAGCGACAAGAGCAGCAGCCCACCCGCGAGCACCGGGGGTGGCGGCGCTCCTCTCGATCTCACCCCACGAGCGTCATCGACGCCCGCCTCGTCGGTCGTTTCCGCCTCCACGACACCTCCGCCACCGCAGAGCTTGCAACACCATCCGCACACTTTCGGAATGTTCGCAGGCCTGCTCCAGGCTGTATCCTCGTCCGGACCGTCGTCCGTTGTCGCCAATAGCGTACAACAGAACGCCGGCGGTGCGATAAACAGCGGTACCAGCGGGACTTTAGCCTCGTCGATGCACGCCGTTAGTCCGGGCAGCGGCGGTGGTGGACCCCTTGCATCGCTAACGACATCCGCCGTACTCGCAGCATCCTCGACCTACAATCCGCTCGGCCTAGCTGTCGGAGGGCCAGCAGTACGTGGCAACACCACGTGTAATATCTGCTACAAGACATTCGCGTGTAACTCGGCACTGGAGATTCACTATCGGAGCCACACGAAGGAGCGCCCCTTTAAATGCAGCATTTGCGACCGAGGATTCTCCACAAAGAGTGACGGCACATGGGTGAAAGGGTGTAACTGCGGGGATCAGCTTAATCCCTTTACCGGTGGGATTCTACAATCGAATCCACACTCAGCTCACCACTCGCTCGGGGTTGCCGCTACCGCACCTGGGGGTTGTGGCTTGACGGCCGGAAGTCAGGATAGCAGACCAAAACGGATCAGGCGGCGGCGGACTGAGGACCGGAAGACCCGTGGGCGGACAGGGACCGGAGGGGGGCGGGGACTGACGTCTGCCTATGCTGCCGTCCGCCTGCCCCCGCTGATGCCCCCCGCCCTCGGACTTCTAGCCTCGGACCACGTCTTCCTGGGAAACATGAAGCAGCACATGCTGACCCACAAGATCCGCGACATGCCACCGCATTTGTTCAGCGACTCGAAGCAATCCggtcagcagcagcagcaacaacagtcTCAAGATCTCGAAAGTTCGAGGAGTCCAATGTGCGTGGACGAATCGAGTCTGCCACCGCCGTTGCCGcctccgccaccgccgccgcctccGATGCCGCCGTCCTCGATCGAATCACCGATGCCCGTCAAGAGATCGCCGTCCGAGGGTGATCTCCCTGCCCCAAAGAGGCCCAGCATGTCCAGCAAACACTTGTGCCAGGTTTGCAATAAGAAtttctcctcgtcctcggcgCTCCAGATTCATATGAGAACTCATACGGGCGACAAGCCTTTCCGATGCACCGTCTGCCAGAAGGCCTTCACCACCAAGGGCAATCTCAAGGTTCACATGGGAACCCATATGTGGACGAACGGAGCATCGCGGCGAGGTCGACGAATGTCTCTGGATCTTCCAACCCTGCCAATCACAACCAAGGACTCGGAGTTTCTTCAGCGCCGGCCGGATCTCTTCTATCCATATCTACCCGCACCGTTCCTTAACGGAGTACAGCAGAAGctGAACGAGATATCGGTGATTCAGAGTAACAACGGTCTACCGGCACATCCGGTGAGCGCCGGCAAGTACGCTGGTCTCTTCGGTTCGATTTACGGGGGCGGTGGTTTTCCCTTGGAGAAGCAGCCAATGGCACCGAGCAACGGTCCGCTGGGTGACGGAAAATCGTCACTGCCGTCGGGTTCGATGCTCTTCCAGACACCGTCGCCGTCTCATTCGCCGGGCACACCCTCGTCCAACACCGGCAATCAGAACTCCGCCAGCGTGCCGGCGTGGAGCGGCGAATCGCTTCAGCATCACTTCGAGCGCGAGGGTCCGTCCAGACCGGAGAACAATCCGACACCGCCGTCGGCGCGGCTCCCGCCACCCTCGGCACCGAGAGGCGAAGGGCTCGCCGCGTGA
Protein Sequence: MQLMRWSITRRLESRGVNKQRRDGCQNEHQNLTNGFSSPRYSEEENDSASEGEESNNGGCSVGVVGGIVVDDAAVDLTSSRSHNEGDEDERDPEELPMEEDDEDDGIVDEIEEPEEDEEGSRKQMRHRQDAENNNSFIGEGGPASGGIVGGGVAAGGIFPPAGTSHVTLEALQNTKVAVAQFAATALAGGADSEAALQDLAMLQSTLYTLQHQQVFQLQLISQLQQQLSITHAGQPVGPVQQGLSSTSSGPTSEAVASIVGMTSGDASNPIKESSSPSPLIHAKSLASLTSPPSSRPPSHHQPSSSPLTPSSLSAQERPALSSSTSPISLPLPATSTMSASPATSSAATSQIPVPMSHQMQMCSISSSLAASIITNNDPPPLHEPNTLEMLQKRAQEVLDNASQGLLANNLADELAFRSGKGSRLSPYDSKSGGGRGEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHTAKFPHVKMNPNPVPEHLDKYHPPLLQQLAASGQRPMPSPPPPPPPPQMQQQQQQQQQQQQQQQHHAAAAAAAAAAAAAASGNFHPAAVAAAAHGFLQPQPPIPLSLAMTGMPPLYRPPIVNHRDDQDIPENLTKSVNAPAISPHSPGPTSAQLNSHHSFHEQQQQQQQQQQQQQLQPSGQQQQPQQQQQLQKTSDRQSPRDEIKLEQRSPIQDYQPQRPPSQDGDERITPKREPEEPEEVADEDNDEFDEASRRYLNPSPSPANHPISHVQSSYDDCSMDSKISGRLEADGEMIDADEEMEEQPENLSSRGVGAAMNRLGQQQVSTHGGGGYPGASPASSSASSGSLQTSFAGILFPGPPSHHHLPHHPTSTAGTTPTGSATGNEMMIDPARDPAIYSSLLPRPGSNDNSWESLIEITKTSETSKLQQLVDNIEHKLTDPNQCVICHRVLSCKSALQMHYRTHTGERPFKCKICGRAFTTKGNLKTHMGVHRAKPPLRVLHQCPVCHKKFTNALVLQQHIRLHTGEPTDLSPEQIQAAEVNEFPPSYPHHPLTSFLPQGFPGLHPAGPGFPLGFPPSRHHVLERHQLENDIDSKEHLHQQQQQQHHHQQQQQQHQLRLQQQQAQLQRRYLEDAHSEDMEDQEDEEEDRREDDERCEDLNRERRSLEPDDEEPNDNDDNDSRKEMSTSVAGMPTFSTSLAALENQVRTITTTASGGMINSSSACSPPPVHRFNGSDKSSSPPASTGGGGAPLDLTPRASSTPASSVVSASTTPPPPQSLQHHPHTFGMFAGLLQAVSSSGPSSVVANSVQQNAGGAINSGTSGTLASSMHAVSPGSGGGGPLASLTTSAVLAASSTYNPLGLAVGGPAVRGNTTCNICYKTFACNSALEIHYRSHTKERPFKCSICDRGFSTKSDGTWVKGCNCGDQLNPFTGGILQSNPHSAHHSLGVAATAPGGCGLTAGSQDSRPKRIRRRRTEDRKTRGRTGTGGGRGLTSAYAAVRLPPLMPPALGLLASDHVFLGNMKQHMLTHKIRDMPPHLFSDSKQSGQQQQQQQSQDLESSRSPMCVDESSLPPPLPPPPPPPPPMPPSSIESPMPVKRSPSEGDLPAPKRPSMSSKHLCQVCNKNFSSSSALQIHMRTHTGDKPFRCTVCQKAFTTKGNLKVHMGTHMWTNGASRRGRRMSLDLPTLPITTKDSEFLQRRPDLFYPYLPAPFLNGVQQKLNEISVIQSNNGLPAHPVSAGKYAGLFGSIYGGGGFPLEKQPMAPSNGPLGDGKSSLPSGSMLFQTPSPSHSPGTPSSNTGNQNSASVPAWSGESLQHHFEREGPSRPENNPTPPSARLPPPSAPRGEGLAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01207587;
90% Identity: iTF_00058908;
80% Identity: -