Afus003812.1
Basic Information
- Insect
- Amblyjoppa fuscipennis
- Gene Symbol
- -
- Assembly
- GCA_963575735.1
- Location
- OY754488.1:44208918-44221185[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 31 7.9e-06 0.00073 20.2 1.0 1 23 224 246 224 246 0.98 2 31 0.0034 0.31 11.9 1.9 1 23 269 292 269 292 0.96 3 31 0.00026 0.023 15.5 0.5 2 23 299 321 298 321 0.96 4 31 0.00026 0.024 15.5 0.4 1 21 341 361 341 362 0.95 5 31 0.0049 0.45 11.5 0.3 2 23 459 480 458 480 0.96 6 31 0.032 2.9 8.9 0.4 1 23 486 509 486 509 0.91 7 31 0.00015 0.014 16.2 0.1 1 23 570 593 570 593 0.96 8 31 0.01 0.93 10.5 0.4 1 23 599 622 599 622 0.96 9 31 0.19 17 6.5 1.9 1 23 635 657 635 657 0.97 10 31 0.00025 0.023 15.5 0.7 5 23 704 723 702 723 0.95 11 31 0.12 11 7.1 0.7 3 23 787 809 785 809 0.90 12 31 7.1 6.5e+02 1.5 0.0 2 23 818 840 818 840 0.83 13 31 0.048 4.3 8.4 0.1 2 23 847 869 846 869 0.95 14 31 1.7e-05 0.0015 19.2 1.2 1 23 877 899 877 899 0.98 15 31 0.4 36 5.5 1.1 2 23 933 956 932 956 0.87 16 31 0.00027 0.024 15.4 3.3 1 23 959 982 959 982 0.97 17 31 0.023 2.1 9.3 0.5 2 23 989 1011 988 1011 0.95 18 31 0.0044 0.4 11.6 5.2 1 21 1038 1058 1038 1059 0.95 19 31 0.0034 0.31 12.0 1.8 2 23 1073 1094 1072 1095 0.93 20 31 0.12 11 7.1 1.1 1 23 1098 1121 1098 1121 0.95 21 31 0.02 1.8 9.5 1.4 2 23 1128 1151 1127 1151 0.91 22 31 3.9 3.5e+02 2.3 0.2 2 23 1159 1181 1159 1181 0.94 23 31 4.6 4.2e+02 2.1 0.0 2 23 1188 1210 1187 1210 0.87 24 31 0.29 26 5.9 2.7 2 23 1219 1241 1219 1241 0.96 25 31 1.6 1.5e+02 3.5 0.9 2 23 1247 1269 1247 1269 0.92 26 31 0.036 3.3 8.7 0.2 1 23 1328 1351 1328 1351 0.96 27 31 0.00016 0.015 16.1 2.0 1 21 1379 1399 1379 1400 0.95 28 31 0.41 37 5.4 1.9 2 23 1500 1522 1499 1522 0.94 29 31 0.6 55 4.9 0.4 2 23 1529 1551 1528 1551 0.94 30 31 0.88 81 4.4 2.5 1 23 1562 1584 1562 1584 0.97 31 31 0.5 45 5.1 0.3 3 19 1593 1609 1593 1612 0.93
Sequence Information
- Coding Sequence
- ATGGAGACCAAGGAACGCTACAACGAGCTTTGCAGGCTATGCGCCTCTTACGATGCCGTCAAAATGGATATATTCGGGCAGGAGGGCAAGAATCGTCAACTCGTCGACAAAATACAAACTTGCCTACCATTCAAAATCGACGAAGATGACCGTCTGCCAAAGTGTTTGTGCTATCGTTGCATGTACaatctcgaaaatttttaCGACTTTCGAACAGCTTGCGTGAACGCTGTAGCCTTGCTGGAGAGGTCTCTGCCACCTGGTGGCAATTCCGCAGGCAGTGACGTTCAGAATGATGTCGAGAGTTGTTCGGAACTGCGTTCGGAGCTTCtcaaagagaagaagaagatgccGATTCTCATACCGGAAGCTCCGATAGTTAATCCGAACGCGGCGCTCGGCACACCACCGAGATTGAACTCGGACGGCGAGGCTGATCAGGAGATCGAAGAGATTCTCGACGCGAGCGGCACGGAGGATGGCTTCGAGGACACGGAGGATCGTAAATCGGACGAGTACGAGATGGACATGGAGACTAATCCTAGTGATTTTTTGGAGATGACACCGATGGTTACGGAAGAATTGGAAGACGCCGAGACCGCGAAGGGTGCGAAAACTTCGTCGCGAAATTCCGATGTTTTTCAACATACCGCCGAGCAGCACGAGGTTTATGTTTGCTCACTGTGCAACAAAGCGTTCAGCTCCAAAGGCCATTTGTCCCTTCACGCGAGGATTCACGTGGGCGCCGGCGATGTAATCGGCGCCAAAGTCGTCACGGACGATCACACGTCGTACAAGAGACCCTATCAGTGCGATCTTTGCAACAAATCTTATTCGACCGCGAAACATCGGTGGGGACACGTATCTACGACTCACAGAGGTCATCCAGCGGTGACTTGTGCGTATTGTTCGCGGATATATTCCACCCGAACGAATCTCGAGGAGCACATAAAATCGCGTCACACGGGTCTGCCACCGCCCCCGGAGTTGCCCGTTCCCTACGTACAACCCGACAACAAATACAAGTGCAAAACGTGCCCGAAGATGTACACGACCGTGACTGAACTCAACAAACACGGAAGGATCTGCACGGGCGAACGGGCAAAGgaaaaaccaaataaaaaattgtcgagaaagagcaagagtcTGATGGACACGTCCGAACTCTCCAGCACCGACTCGGACGACGAAAGCAAGGATTACCGCAACGCCGAGGCtaaattgtcgaaaaatcCACAGCTCACGATACTCAAACAAGCTCTGACGAAGGGCGAGGGCTTGAAGCGAGATtacgatgataaaaattcgtcgaacTACAAGCCCGTCAAGATAGCGAGaacagACGTCAACGAGGTCGCGGCGCAGAAGAGATGGTACTGCGAAACGTGTCCACAAAATTTCACTTCGGTGGATAAGCTGAAGGAGCACGAGTCTACGCACGACGCCGAAAGGCCCTACATATGTATATTGTGCGAGAAAGACTTCGTATTGAAATCATCGTTGAGCAGGCACATTACGTCGACGCACGGTGTCGATCCGACCCCCATAGTCGACAGCGACAAGTGCCTCAAGAAGACGGTCCTGGCGCATTCGTGGAACAAACAATTGATAAAAACCGAGGTGAAGAGAGGTCCGAGACACGCATCCGAGTCGTCGGAGGACGTGGAGAGCACGCAAGGAGGAAACATGATTGAGATCGAGACGGTATTCGTTTGCGAGATTTGCACTCGGGACTTCAACGATCGTGCGTCGCTGTGGTTACACATTCGGGCAACACACAAAGAATTCGCGGCGTTCGCTTGTGGCGTGTGCTTGAAAATTTGTAGCGATAACGCTCAGTTACTGAATCATGTGAACATGTATCACGGTGGATCGAAATTGTTGGTGTCCGAGCAGCGCAGATACAGCTGTACGATTTGCGGAAGGCAGCAtgactcgagaaaaaaattgatgacacACGTGTCGATACACAACGTTGATCCCGGCTACGATCCGGCGAGTTTCGTACAGTTGAACAGCAATTATTACAACGAGAACGTCAACAGTAACGAGGCGAACGAGCAGGGAATGGATTTCGACGCTGAGGATGGCGACAAGGTGGATTCTTATATTtgttacaaatctttttcgaaCGAGGATCATCTTATTCGGCATCAACGCAATGCGCACAAGTCCGAGCCCGTGATAGCATCGGGTGATGCTGTAACGAATACCAACGGTTCAGCACCAGGTGTAAACGGCACCAAAGCTCAGTATCATCTGTTCTTCGTGTGTGAGTTGTGCGGCAGTTCACATCCTAGCAAGTGGGAACGTTGGTTGCACGTCAGCAGCAATCACAGCGACGAGTCATCGATAATATGCGAACGAGAGGATTGCGGAAAGATCTTCGCAACAAAAACCCTACGAAACGAGCATTCCCAGCACCACTTGATCCAGGGTTCGTCGCCAAACACATGCGAGGTCTGCGGAAAGTTGTGGGGCAGCAGAGTGGATTACTGGAAGCACGTTATGGGAGTTCACTCGGATACGGTGCCTCTCATCTGCGGCGTATGCCTTAAAGTATTCCCCGACATGATAAAGCTCAGTAATCACGTGAGGTCGAGTCACTGGCCACTTACGAACGGTGACTTCAGTTGCGACATTTGCGGCAGGCCTTACTCGAACAAATCGAAAATGTCTcgtcatcgaaaaattcacgGCCTGGACGTCGACACGTTGTTGAATAACGGCGCGGTCGAGCCAGCGAACGAGACTCTGTCTTCCGAAAAGAATCTCCCAGTCGCCGAGGTCGAGCTGACGTGCGAGATGTGCGCAGACCTCACGTTCTACAATTGGGAAACGTTGTGCAATCATCGTCGACTGATGCACGGACTCTTTCCCTGCGATCTTTGCAACAAGTGTTACGGCCGAACGTCTCATCTCTGGAAGCACGTAAATCGCGTTCACAAGGGTCACAAAGACGTGACTTGCCGGTACTGCATGAAAACGAGTGCGTCGAAGGATCACCTCGCAGCGCACATCGCCAAGATACATCGCTACGAGCCCGACAGCAAGCTCGAGATTCGCGAGTCGCCGAATTGCAAGCAAACAACAGTCGAGGACGAGGGCGTTCATCACTGCGACAAATGCAACAAGGGCTTTCACAAGCGTTATCTGCTGCGTCGTCACATGAAGGGTTGCCAAAATTATCGGAAAGATCCGGGCGCACTGCTGACGCGTTGTCGCGCCTGCGAGAGGATCTTCAAGGATCGTGCGAGCCTCCAGAAACACATTGAGAATCATCACAGCACTTACACGTGCCACTTGTGCGACGAGACTGTAACGTCGAAGCTCGGTATAATGACGCACAATCGGGTCAAACACATGGATCATCCCGATCTAACGTGCGACAACAGTAGttgcaaaaaattgttcagaACCAAAGAGGATCTCGAGTCTCATAGGAAAGACCACAAGTACCACAGTAGCCCGAACGTTTGCGACTTCTGCGGCGATACCGTCGAGAACAAGTTGAAACTGAAGATGCACGTCTTGTCGTTACATAGAAACGAGATCGGCGTTTCCTGCGGGGTGTGTCTCATACCGATGAAGGATCCGAAGGATTTGAAGAAACACGTTGAGGATGAACACACCGGTGTTCTGTTGAAGCCGAACACTTGCCAAGTTTGCGGCAAGCAGTACGCCTCGAAATGGAAGGCTTTCGATCACACGAAAAAATGTCACGGCAAAGTTTTTCGCACCTGCAAGCAGTGTCTGGCTGTATTTACGACCGACTCGGACATACGTTATCACTACGAGCACATTCACAACGTGCCGAAGGATCAACTCGCCGGTTTCGAGAAATGTCTCGACATAAGGCCGGACGAGTTCGACCACGCCGATGTCGTTGTCAAGGAGGAGCCCGAGGATTACGACTACGAGAACGGTCACTGCGACGGCGAGGTTTACGACTTCAAGCGTCGAAGAAACACCACCGACACCTACGACTGCGACATGTGCCCTGAGATCTTTCTCAATCGCGACACGCTCTCCGATCACTACAGAAACGTTCACAACAAAGATCCTCAGCGTATGTTCAAGAAGATAAAACTTGATAATTCGAGCTCGAAACGAAAGATGCGCAATCGGGAGAACTTCGAGTGCAAAAATTGCGGAAAACAATTTTGCACAAAGACACTGTTTTGGAATCACATTAACGTGTGCACGAGAAGAAACACGACCAATCGCGACGATAACTCGCGCAGCTTTCCGACCTCGATACTCGAGGCTCATCTCAAGAACAACAAGATTAAAAAAGAGCCACTCGAGCCCGCACTCAACGAGAGTAACTTGAACATCCCGGATTTCAATCTCTTCGAGGACATAAATATGCAACTCTCGGAGCAAAAACCAGTACCAAACTTGATGCCACTTTCGCAGCTTAGATTACTGTCAAGCATGAAATGTTCGAGAAAAGATTCGCGAAAAGTTTACGACGAGTCGACCAATACCGAGTGCACCTGCGAGGTATGCGGCAAGCAGTGGCCGGCGAAGAAACACTTGTGGCAGCACCTCATAAGATTTCACCGCGCCGAAGCCGCTGTGACCTGCGGTGTTTGCCTTAAACTCTGCAGAACGTACGAGGAACTTGCGGATCATCTCAAAGCCAGTCACGAATCGATATTGGGCTGCGAAGGGAACAATTTCACATGCAAAACTTGCGGTCGTTATCACAACGCGAGAAGCAAACTTCTTTTGCACATGAGCATACACATAAACAGCAGCGGTATAGCCTGGTGCCGAAAATGCGAACAGAGCTTCGAAAGCGAGGAAAAGTTGAACGAGCATTCGGCAACTTGCGACAAGCCGCAGCCGGACTACGAGGATCAGAGCAACGATGTCGACCAGGATGCGaagaacgaggacgacgacaagGGAAGTTTGATAGGAGACGGAGCATCGCTAACTGGGGAgggcgaggaggaggaagaggaggaggaggaggaggaagaagaagaggttGAATTTTCGGACCATCACGTGGAGAGCCATTCGGAGCACTCCGAAGATTCGGAcagcagtagcagcagcagtagcGGAAGTGGCAGCGAAgacgagaacgacgaggaAGCCGAGGCGGAAGAGATCGGTTCGAGAACCAATAGTCGAGCTACCGGCGAACAAAGTTGCCAATTGGAGAGCGAGGATGAAAGAGAGTTGGAGGATTACGACGGAGTTCCTGCGGTCGAGGAAATTGAGGAACGAGCCGAAGGGACGAACAGTCCGGTGGCTGTCGAAGCTCCCGAAGAAATTACAGAGAAAGATAAAAACAAGgtggaagaaaaatcgaaggaCAAAGACCTCGAGGAGGAGAGAGATTGCATTGAGGAAGATCAAAATTTGGCTGACGATGAGGAGAAGGATAACGACGAGGAGGGAGAAGAAAGCAAATGCGCTGAGGAGTCTGACGACGACGGACCTCCTGTATTGAGTCCTGTGATGCCGTTGTCGATGGAGCATGAGGGCGAAGAATCCGATGCCGTAGGTCACAAATTGAGCCCGATGATACCGTTGACCGTGAAAGAAGCGGGAAATCAACCGGAGGAGGATGTCtcggaaatagaaaatatcgGAACTGCTCAAGACAAAGCAACGGCTCCGTCCTCTGTGCCGAACGCCGAAGAATATTTCGAGTACGCGGCGTCCGGCGAACGTTCGAACATCAGCGCAGCAGCGTCCGTCGAAGATTTAGCCTCCGACGAAGACGCCGAGACTGCGATAGTCgaagacgagaacgaggaattGGACGACGAGGATAGCAGAATTCACGTTGTTAATCCCAACGACGAGTACCACTCTGACAATAGTCGTAGCGCGGAGGAATCTGAGGAGGAAGCAGTTTTCGAAGATAATTCGGAGGTTGAAGCTGAAGAGGAAGTAGAAGAAGTAGACGGTGTAGAAGAAGTAGAAGAAGTAGACGAAGTAGAGGAAGTTGAAGAAATCGAAGAGGTAGaaattgaagaagaagaagaagaaggggaAGGAGAAGAAGGGGAAGCGCTGCAGATACACAACTTGGATGGTACGGTACTCATGGTCGCCAATGACGCTGACGGTAATCAAATATTGATTCAGCAGAACGTATCAGACATGGAAAACGACGACTCCATGGCAGCTGTGACAGGATTTATCTATgaggatgacgacgacgaggattaTGAGCTTCATGGATTCCCGGTAGATTCCGAGCGATACGAAGCTGAAGCAATCGACGAGAACGAAAAAGCGGGCCAGGAAGAAGAGGATAATGCATTGAGCGATAATGAAGAAGAgcaagaagaacaagaagaacaagaggaacaagaagaagaagaagaggaacaagaagaagaagataagGAAGATAAAGAAGAAGTCGAGGATGGTGACATACAGGATTCGAATACGAGTGCCAAAAGCGATGTGTCAAGGACGTAA
- Protein Sequence
- METKERYNELCRLCASYDAVKMDIFGQEGKNRQLVDKIQTCLPFKIDEDDRLPKCLCYRCMYNLENFYDFRTACVNAVALLERSLPPGGNSAGSDVQNDVESCSELRSELLKEKKKMPILIPEAPIVNPNAALGTPPRLNSDGEADQEIEEILDASGTEDGFEDTEDRKSDEYEMDMETNPSDFLEMTPMVTEELEDAETAKGAKTSSRNSDVFQHTAEQHEVYVCSLCNKAFSSKGHLSLHARIHVGAGDVIGAKVVTDDHTSYKRPYQCDLCNKSYSTAKHRWGHVSTTHRGHPAVTCAYCSRIYSTRTNLEEHIKSRHTGLPPPPELPVPYVQPDNKYKCKTCPKMYTTVTELNKHGRICTGERAKEKPNKKLSRKSKSLMDTSELSSTDSDDESKDYRNAEAKLSKNPQLTILKQALTKGEGLKRDYDDKNSSNYKPVKIARTDVNEVAAQKRWYCETCPQNFTSVDKLKEHESTHDAERPYICILCEKDFVLKSSLSRHITSTHGVDPTPIVDSDKCLKKTVLAHSWNKQLIKTEVKRGPRHASESSEDVESTQGGNMIEIETVFVCEICTRDFNDRASLWLHIRATHKEFAAFACGVCLKICSDNAQLLNHVNMYHGGSKLLVSEQRRYSCTICGRQHDSRKKLMTHVSIHNVDPGYDPASFVQLNSNYYNENVNSNEANEQGMDFDAEDGDKVDSYICYKSFSNEDHLIRHQRNAHKSEPVIASGDAVTNTNGSAPGVNGTKAQYHLFFVCELCGSSHPSKWERWLHVSSNHSDESSIICEREDCGKIFATKTLRNEHSQHHLIQGSSPNTCEVCGKLWGSRVDYWKHVMGVHSDTVPLICGVCLKVFPDMIKLSNHVRSSHWPLTNGDFSCDICGRPYSNKSKMSRHRKIHGLDVDTLLNNGAVEPANETLSSEKNLPVAEVELTCEMCADLTFYNWETLCNHRRLMHGLFPCDLCNKCYGRTSHLWKHVNRVHKGHKDVTCRYCMKTSASKDHLAAHIAKIHRYEPDSKLEIRESPNCKQTTVEDEGVHHCDKCNKGFHKRYLLRRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHSTYTCHLCDETVTSKLGIMTHNRVKHMDHPDLTCDNSSCKKLFRTKEDLESHRKDHKYHSSPNVCDFCGDTVENKLKLKMHVLSLHRNEIGVSCGVCLIPMKDPKDLKKHVEDEHTGVLLKPNTCQVCGKQYASKWKAFDHTKKCHGKVFRTCKQCLAVFTTDSDIRYHYEHIHNVPKDQLAGFEKCLDIRPDEFDHADVVVKEEPEDYDYENGHCDGEVYDFKRRRNTTDTYDCDMCPEIFLNRDTLSDHYRNVHNKDPQRMFKKIKLDNSSSKRKMRNRENFECKNCGKQFCTKTLFWNHINVCTRRNTTNRDDNSRSFPTSILEAHLKNNKIKKEPLEPALNESNLNIPDFNLFEDINMQLSEQKPVPNLMPLSQLRLLSSMKCSRKDSRKVYDESTNTECTCEVCGKQWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCRTYEELADHLKASHESILGCEGNNFTCKTCGRYHNARSKLLLHMSIHINSSGIAWCRKCEQSFESEEKLNEHSATCDKPQPDYEDQSNDVDQDAKNEDDDKGSLIGDGASLTGEGEEEEEEEEEEEEEEVEFSDHHVESHSEHSEDSDSSSSSSSGSGSEDENDEEAEAEEIGSRTNSRATGEQSCQLESEDERELEDYDGVPAVEEIEERAEGTNSPVAVEAPEEITEKDKNKVEEKSKDKDLEEERDCIEEDQNLADDEEKDNDEEGEESKCAEESDDDGPPVLSPVMPLSMEHEGEESDAVGHKLSPMIPLTVKEAGNQPEEDVSEIENIGTAQDKATAPSSVPNAEEYFEYAASGERSNISAAASVEDLASDEDAETAIVEDENEELDDEDSRIHVVNPNDEYHSDNSRSAEESEEEAVFEDNSEVEAEEEVEEVDGVEEVEEVDEVEEVEEIEEVEIEEEEEEGEGEEGEALQIHNLDGTVLMVANDADGNQILIQQNVSDMENDDSMAAVTGFIYEDDDDEDYELHGFPVDSERYEAEAIDENEKAGQEEEDNALSDNEEEQEEQEEQEEQEEEEEEQEEEDKEDKEEVEDGDIQDSNTSAKSDVSRT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00721441;
- 90% Identity
- iTF_00721441;
- 80% Identity
- -