Afus017885.1
Basic Information
- Insect
- Amblyjoppa fuscipennis
- Gene Symbol
- clz9_3
- Assembly
- GCA_963575735.1
- Location
- OY754495.1:3910424-3913626[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.5e-08 1.4e-05 25.0 0.0 5 39 52 86 48 88 0.94
Sequence Information
- Coding Sequence
- ATGCCGTACCAATATCCAACCGTGTGGTCGGGTACTGGTACGCTCATGCGACAGTGCGTCGCCCCTATTGCCGGCCAGAACAAGCTCAGCGACCATAACCTCAATGGCGAgaCGTCGTCGATCATGGCAGGGAATGAGACGACACATTCGTTATTGAAACAGGCTCTCGAAACTGTGCAAATGGGCACACCACTCAGGACGGCAGCTAAAATGTTTAGTGTTCCGAGGAGTACGCTTTACGACAAACATGTTAAGGGTGTCCCAATAAATACCCCAAAAGGGCCACAAACTGTTTTGACCGGAGACGAGGAAAAAACGCTCGTCAAATGGATTTTTCACGTTAGTGAAAAAGGTTTCCCCATAACAAAGGACCAACTGTGTGACAGTGTTGCTCGTTTAATCGTCAGACTGGGCCGAGAGACACCATTCAAGAACAACCGTCCTGGCCGGCGTTGGTACGAGGGATTTCTCCGGCGACATCCCGAACTGAGTCAAAGGGTCGCTCAAAATCTGAGTTACAGTCGGGCTTCGGCGACAGAAGAAAGACTTAGGAAATGGTTCAGTGAGGTTGAGAGCTACTTAACTACGAAGAACTTACTCAACATCGACTCCTCGAGAATTTATAATTGTGACGAGAGTGCTTTTTTCCTCTGTCCAAAGGCGGATAGTGTGATTGCAAGAAAAGGAGCAAGATCTGTGTATAAAGTTGTCAATGGCGACGAAAAAGAATGCCTTACAGTTCTTTTTATGGTCAACGGAGCAGGTGCAATGGCGCCGCCAATGGTGATGTTCTGGTACCAGAGAATACCGGCCAGCGTAGCTCGAAACGTCCCTTCTGGTTGGAGTATCGGTACATCGGAAAAGGGTTGGATGACCGCGGAAACATTCTTCGAATACATTACAAATGTTTTCTACCCTTGGCTGGTGAAAAACAACATCGAGTTCCCCGTGGTACTCTACGTGGATGGCCATTCTTCTCATTGCACGATGCCTTTAAGCGAGTTCTGCAGGAATCATCAGATCGAACTCATCGCATTATATCCGAATGCCACACACATTTTACAGCCCTTGGACGTGGCGGTCTTTCATCCTTTAAAAACGTCGTGGAAAAAAACAGTTAACAGGTGGCGACTCGAACACGATGGAACACGTCTAACGAAGGACGTCTTTGCACAAGTACTGAAAACTGCAGTCGACTCAATGGATCTCACTCAAACAATCAAGCGAGGATTTGAGACATGCGGGTTGTCCCCGTTTTCGGCAAACGCAGTGGATTTTAATGTCCTTAAAAAAGGCTTAAAAGAACAAACTGCTGAGAAAACGGTTGAATCGGAACAACGTCAGAGGGAGTATATGAGTCATCTCATATTCACCGAAGATAATCTACCAGTTGGTTTGCTATCAGAGTTCAACGAAGCAGCGCGTCTCAGTCATTGGAGTGGCAAAACGGAGTATCAAGGACTCTTTGAGTTTTGGTTACGAGTCAAGAGACTGACGGTCGACGGCGCGACGGTGGAGACCCACACAATAATGGACAACTCGAGAACGACGTCCGAAGACTGCGAAAAAATGACGACGGCTCGCGTTGGAGTAACGTCAGTTAATGAGCTGGACTCAACGATCAGTGCAGACTTAATGGAGGTCGAAGGGAACTCTTCGATATTCACTCACGACAACGCATTGAACTCGGTGTGGAGTGAAGATAGCTTGCTTGTTCTGACGTGCGACGACAATACAACCTTGGCGAGAATCGATTGCAACGAAAATACGAGTACTGCTCAATGGTTCGATGGAACACCAGAGATCGGATTTTTATCTGAGACTGCAAAAAACATACACATGACTTCAGAGAACGATCGAGTCGATAGCGCGGCGGTACAGAACTGTACAAGAGATAGTCCGATAACGATGCCCGAAGACCGCGAAGCAATGCTGACGGATTGCTTAGGATATGTATTGGACAATCAGAGTTTGAGATCGACGTCAGATACTGCAGACTTCATGGAGATCGCCGACGGCAGTTCGGTATTAACGAAGAATAGCGTGAAGACGGTAGCTAATCACAACTTGACTGCTGGTACTAATGACTGCGAGAGGATTGAAAGTGCTATCACAACTAACATGGACCCGGTCCTGTTGGAGATTGATATTGGAGAAAGTCAGCGTATGGAAATCGGATCTATATCTGAGACTGCCGAGACCGACAAATCGacAGAGCACAAGCGTCGAAAGCAGAGCCCCTGCGGGTACTCCAGACCCGTTTAA
- Protein Sequence
- MPYQYPTVWSGTGTLMRQCVAPIAGQNKLSDHNLNGETSSIMAGNETTHSLLKQALETVQMGTPLRTAAKMFSVPRSTLYDKHVKGVPINTPKGPQTVLTGDEEKTLVKWIFHVSEKGFPITKDQLCDSVARLIVRLGRETPFKNNRPGRRWYEGFLRRHPELSQRVAQNLSYSRASATEERLRKWFSEVESYLTTKNLLNIDSSRIYNCDESAFFLCPKADSVIARKGARSVYKVVNGDEKECLTVLFMVNGAGAMAPPMVMFWYQRIPASVARNVPSGWSIGTSEKGWMTAETFFEYITNVFYPWLVKNNIEFPVVLYVDGHSSHCTMPLSEFCRNHQIELIALYPNATHILQPLDVAVFHPLKTSWKKTVNRWRLEHDGTRLTKDVFAQVLKTAVDSMDLTQTIKRGFETCGLSPFSANAVDFNVLKKGLKEQTAEKTVESEQRQREYMSHLIFTEDNLPVGLLSEFNEAARLSHWSGKTEYQGLFEFWLRVKRLTVDGATVETHTIMDNSRTTSEDCEKMTTARVGVTSVNELDSTISADLMEVEGNSSIFTHDNALNSVWSEDSLLVLTCDDNTTLARIDCNENTSTAQWFDGTPEIGFLSETAKNIHMTSENDRVDSAAVQNCTRDSPITMPEDREAMLTDCLGYVLDNQSLRSTSDTADFMEIADGSSVLTKNSVKTVANHNLTAGTNDCERIESAITTNMDPVLLEIDIGESQRMEIGSISETAETDKSTEHKRRKQSPCGYSRPV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00058622;
- 90% Identity
- iTF_00058614;
- 80% Identity
- -