Avir016591.1
Basic Information
- Insect
- Altica viridicyanea
- Gene Symbol
- grn
- Assembly
- None
- Location
- GWHAMMQ00000089:307109-325046[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.3e-20 1.6e-16 59.5 4.7 1 35 201 234 201 235 0.98
Sequence Information
- Coding Sequence
- ATGATTGTTTTAGATAAAAAAGAAAAATTTTTGATTACATCAAGGATGTCAAGTAGCCAAGTATGCAGGCCCCACTTCCATGCACCCCTTCACCCATGGCTTTCAGACAGCACGAAGCCCCTAGGTCACTCAAGTCCGTGGGTGCCTTTTGGCGGCGGTGATCCTGATAAATCTCAATCTCCCAGCTCAGGTCCAACTCAAGCCCATAACATCTTTTCGTTCCCTCCAACTCCCCCCAAGGACTCAACACCAGATTCAGTTGTGCCGTCTGGAAATGGTGCACCTGAATACCAATCTGCAGTTTCGGCGGCGATGGGAGCTTTTATGCATGAAAACCCTCAAAGCTGTGCATTGGATGTGAAACCATCTGGTCTCGGATCAAATAAGCAGCGAGAAGGTAGTGAATATGAAGGTGGTGCCACCTCGGGCATGTTTAATGGTAACTTTGAAGGCACGTACGGGGCTGCGTATGCCCACGGTATTCATGGGGGAGCCTATTCCCCACAGAACAAGCATCATTTAGGGGGCAGTGGCGCGCAGGGCGTTCAATCGCCAAATAAACCTAGGAATAAATCGAGAACTAGCGCGGAGGGACGTGAGTGTGTCAATTGTGGTGCTACAAGTACGCCACTGTGGAGAAGAGACGGCACTGGTCACTATCTCTGCAATGCATGTGGACTTTATTATAAGATGAATGGACAAAATAGACCACTCATTAAACCTAAAAGAAGACTGGAACATACTATAAACTACTGA
- Protein Sequence
- MIVLDKKEKFLITSRMSSSQVCRPHFHAPLHPWLSDSTKPLGHSSPWVPFGGGDPDKSQSPSSGPTQAHNIFSFPPTPPKDSTPDSVVPSGNGAPEYQSAVSAAMGAFMHENPQSCALDVKPSGLGSNKQREGSEYEGGATSGMFNGNFEGTYGAAYAHGIHGGAYSPQNKHHLGGSGAQGVQSPNKPRNKSRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLEHTINY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00021016;
- 90% Identity
- iTF_00792654;
- 80% Identity
- -