Avir010686.1
Basic Information
- Insect
- Altica viridicyanea
- Gene Symbol
- GATA5
- Assembly
- None
- Location
- GWHAMMQ00000424:257987-268068[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-17 2.4e-14 52.6 1.8 1 35 277 310 277 311 0.97 2 2 1.9e-17 4.2e-14 51.8 5.9 1 35 333 366 333 367 0.97
Sequence Information
- Coding Sequence
- ATGACTGATAGCAAAATGGATCCAAAAGAAGAACCAAATCAACCATCACCCGAAGACATAAAACCAAAAATCGAAGAAACCGGTGTAATCCGTCGTAACTACATCACCTCCTCGGGCACCATCGTTGAAACAACCGAAGATCAATCAGAACCACCCGAAGTCGCTACTGAAGAAATCGTTAACACCACCACCTCTTCTTCGACCCCCCAAAGTCCACAAAATCCTCCAAAAACTGATTATACCGAAATTCTACAAGAACCGCGTGATTTTATCGAAAATTCGAGTTTCGCACCGGAAATTAGTTATGCTACTGTCAATATTGAAGGCAGTGTGGTTCCGGTTACGATTAGTACGGAAATTGAACATGCCGCTGATTATGCTAATTTACAAACACCTCATTATAATCATGGATATAGTGATGGATCGCAATATTTAGCACAACATCAATATCAAAATTTGTATATTGAGAGAAGTGTTGATAATTCGCCACCTGGTGGGACTTTGTTGTATCGAAATGATCCGAATTTAGCCGCTGAACGATATCAAGGAAATTACGACGTTTCGAGCAGTCAACAACAAGTAAATTTATTAGCATCATCAGGCGAGACATATTGGACATCAACCGGTAACAACGCCACCTATCAACAACAACAATACAATATTCTTCAACAAGCCGATAGCACGCAACAACAACAACAACAACATCAAGCGCATGCGCAGTACGCATTTCAGAATGCAGCAGCAGCAGCAGCTTGGTCAACAACGGCCTTGATCGAGGATGGTCATGGACGAGCAGCCAACGCCAACCAAGAGGTACTTGTCAAAGAGTGCGTTAATTGCGGCGCTAGTGTGACGCCGCTTTGGCGTCGAGACGGGACCGGGCATTATTTATGCAACGCGTGCGGGTTGTACCATAAAATTAATGGGGTGCATCGACCGCCTATTCGACCCACCAAAAAACCACAACCGAGTGGAAATAGAAGAAATGGAGTTTCATGTGCAAATTGTAAAACTGTAAATACAACTTTATGGAGAAGAAATAATCAGGGTGAACCTGTTTGTAATGCATGTGGATTATATTATAAATTACATAATGTTAACCGACCAATTAGTATGAAAAAAGATGGAATTCAAACAAGAAAACGAAGACCAAAAACATCCACAGTTTCAAATCCGGGAAATGTACAATTGAGAATGGGTGGTATGTCATCATACTCGTACCAACCTCAACATACACAAGAATTAGAATTACCACCTGATCATTACGAAGTACCAACTATTAATATTTATCATCCACATGCGCAAAATTATCGACAATTTTCCACAGAAAATCCACGAGGCTTAAATGTACAACCACTTCAACCAATAATAGTAACTGAAGATGAACAAACAAGTGTCATAACGTCGACATCGCAACAAGCGCCAAGATTTAAAAACGAAGAAGAAGAAGAAGACGTTAATAATTCTACGACGCAATAA
- Protein Sequence
- MTDSKMDPKEEPNQPSPEDIKPKIEETGVIRRNYITSSGTIVETTEDQSEPPEVATEEIVNTTTSSSTPQSPQNPPKTDYTEILQEPRDFIENSSFAPEISYATVNIEGSVVPVTISTEIEHAADYANLQTPHYNHGYSDGSQYLAQHQYQNLYIERSVDNSPPGGTLLYRNDPNLAAERYQGNYDVSSSQQQVNLLASSGETYWTSTGNNATYQQQQYNILQQADSTQQQQQQHQAHAQYAFQNAAAAAAWSTTALIEDGHGRAANANQEVLVKECVNCGASVTPLWRRDGTGHYLCNACGLYHKINGVHRPPIRPTKKPQPSGNRRNGVSCANCKTVNTTLWRRNNQGEPVCNACGLYYKLHNVNRPISMKKDGIQTRKRRPKTSTVSNPGNVQLRMGGMSSYSYQPQHTQELELPPDHYEVPTINIYHPHAQNYRQFSTENPRGLNVQPLQPIIVTEDEQTSVITSTSQQAPRFKNEEEEEDVNNSTTQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -