Avir010674.1
Basic Information
- Insect
- Altica viridicyanea
- Gene Symbol
- gata5-a
- Assembly
- None
- Location
- GWHAMMQ00000424:272415-282900[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.9e-18 8.6e-15 54.0 2.7 1 34 148 180 148 182 0.97 2 2 2e-18 4.5e-15 54.9 4.9 1 35 202 235 202 236 0.97
Sequence Information
- Coding Sequence
- ATGGATTTAAATTTCTTACCGCAACACAGTCCCTTATATTCGAGATCGAGTAATTATAATTCGGGTACTATGCCCTATTATAATAGTGCTTCTCCGGAGTTATCTACTCAACAATCACAACTTTGGAGTAATTCGGGTGTTAATACAAGTGGTGCTTTATCTTTATCTGAAGATTATCCAAAAGTGAGTTCTTCATCTACTGGAAGTAGTTTACCAGCTTTTAATCGAATTCCAACAACTTTTACAACAAATAATCACAATCATCATCGCACCCCCTCGTATCTTCCACCTAATGCTACAATATATTCTGATTGGCCCTCGTATACTTCCGATCAATATGGACTTAATTCACCATCACATAGAAATCGACAAATTTCTGCTGCTGCTTCATTATCAGCAATTGATCCTCGCACAGCGGAATTCTTCACCGAAGGTAGAGAATGTGTGAATTGTGGCGCAATTGATACGCCATTGTGGCGCAGAGATGGCACCGGTCACTATTTGTGCAACGCTTGTGGCCTCTACCATAAGATGAACGGCATGAACCGGCCACTTGTCAAACAGCCTCGTAGATTGTCAGCTTCACGGCGTGCTGGATTAACATGCACAAATTGTCATACAAGCACAACATCTTTATGGCGAAGAAATGCTTTAGGAGAACCAGTTTGCAATGCATGTGGCCTCTATTATAAATTGCATTCGGTTAATAGACCACTTTCTATGAAGAAAGATAGTATTCAGACAAGAAAACGGAAACCTAAAGGTAGTAAAGGTTCAAATGCAACAAGTACTCATATACCAAGAAATTTGACAAATGCGTCTTTATCGTCAATAAAAATGGAGGATGTTGGAGTTAAATTAGAACATACAGGATTAGATACATACAACGAATTACGAACATTAAATATGCAACAACACGCAACAACACCAAGTTACGCATACGGCGCAACAACGCACCACAACACGCATACGCCGCATTCGCCGCAACAACTTTCAACGCAAGTTGCGCAACATTATTATGAAACAATTTTACAACAACAACAAACTCCAAGTCCGCATTCGAACGATTCGGATAATGATACAAAGCCATCTTTAAACAACAACAACAACAATAACAACAATAATAATAATAATACTAAAGTTATTATAAATGGCGATCATTGTGTGGATAGACCAACTGTTGTTTCGTTATCTTCGTAA
- Protein Sequence
- MDLNFLPQHSPLYSRSSNYNSGTMPYYNSASPELSTQQSQLWSNSGVNTSGALSLSEDYPKVSSSSTGSSLPAFNRIPTTFTTNNHNHHRTPSYLPPNATIYSDWPSYTSDQYGLNSPSHRNRQISAAASLSAIDPRTAEFFTEGRECVNCGAIDTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKQPRRLSASRRAGLTCTNCHTSTTSLWRRNALGEPVCNACGLYYKLHSVNRPLSMKKDSIQTRKRKPKGSKGSNATSTHIPRNLTNASLSSIKMEDVGVKLEHTGLDTYNELRTLNMQQHATTPSYAYGATTHHNTHTPHSPQQLSTQVAQHYYETILQQQQTPSPHSNDSDNDTKPSLNNNNNNNNNNNNNTKVIINGDHCVDRPTVVSLSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -