Basic Information

Insect: Altica viridicyanea
Gene Symbol: -
Assembly: None
Location: GWHAMMQ00000311:252685-256172[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 9.3e-05 0.075 13.1 1.4 9 44 465 497 462 497 0.89

2 5 3.5 2.8e+03 -1.6 0.1 18 26 498 506 498 515 0.75

3 5 5.4 4.4e+03 -2.2 0.1 18 29 580 591 573 595 0.77

4 5 8.5e-06 0.0068 16.4 0.4 5 39 600 631 598 635 0.92

5 5 0.00015 0.12 12.4 3.5 13 44 637 665 632 665 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	9.3e-05	0.075	13.1	1.4	9	44	465	497	462	497	0.89
2	5	3.5	2.8e+03	-1.6	0.1	18	26	498	506	498	515	0.75
3	5	5.4	4.4e+03	-2.2	0.1	18	29	580	591	573	595	0.77
4	5	8.5e-06	0.0068	16.4	0.4	5	39	600	631	598	635	0.92
5	5	0.00015	0.12	12.4	3.5	13	44	637	665	632	665	0.90

Sequence Information

Coding Sequence: ATGTCCGAAATAAGTACCGAAATTGAATTAGGAACTCAATATATTCTTAATGAGTCAGAATTTATACTTGAACCTTCCGAACTGAGAACAGACGATTTAAACGATGTGATTTATATGGATGGACACCAAGCTTTTCTTGTTAATGGTCAATTATTACAAAATTCAGGTGAAACTCCAACATTAGTTTTACAAGAAGGAGAAGATATAAACCAATATTTAATAAATGGAGATAAAGGAGAACTATTATTAGCAAATATAAAAAATGATACTATTAATGAAACTCAAGAAAACCAGCATATTATTCATTATATAGATGAAGATGGAAATATTACTGAACCTCAAGAAATTCTTTATATAAATGAAAATGGTGATCCAATAACCCAAGAAAATATACATCAATATAAATTAGCTGAATTGATGGAAACTGGAAATTCTCTTCCTGTTACTGAAGATGAATTAGCTGCAATTATAGATTCTGATAGTTTATCTCAACAACCAAATGATGATAATTCTGTGATGGAATTGAATGCTTCTGATTGGTACCAATTTGCAGTGGTACAAGATCAAGATTTTCAATACGAAATTCAATCTAGTGAAGATTCTAATCAAGATTTTTCTGCATTAAATATAAATTCCCCTGTAGACGTATCTGCTATTACTGGAAAAGATCATATAACTGGTCAAGTGGTAACATTGGAAAGTTATATGGATAGGATTCAGAAAAAAATAAAAAGCACACCATTAAATTCTAATTATTGGAAAAAACCAAAACACAATTTAAATGCATTTTTAAATAAGAAATTTAATTTAGGAGTCACTTTAGGAGGTAAACGTCTTGTAGGTAAAATAGTTCATGTAGGAACCAAAGATGAATCTACCACAAATGAAATAGTACCGGATACAGTAACGCAAATTAATGAAGTTCAAGATAATAATATCGAGCCTTACCAAGAGTGTTCTTTAGATTGGATAAAATCGATGACAGGCAACTTAACACCACCAAAAAATAATACGCAAATGTTGTATCAAACCAAATTGCTATCGAAAAAATCAGATCAGTTTCAACGAATATCTGCTACTCTTTCAAATCTTATGAGTAAAGAAGATGTAAATAAGCAATTAATTGAAAAAAGTTTACATATAAAAATTATTGATAAATTTTGTGATAACACGAAAAAAGGTACACAAAATGTATGTTTTATCAGTGGTTATATGGAATCGAAAATAGTTTACACAGGAACAGAAAGCTTGGAGGAAACATGGACTTTTGTTCCAGATACACTTACTACTGAATCCGTTAGATCTCAGGTTAATAAGAAATCACAAATAAAATACACCGACGTTATAAACCTTATAATAATTACAAAACATCAAGAAAACATGCGTTTTGTTAAAGTGATCCTAGATCCGAAAAGTCATACATGTGGAACTTGTAATAAAACTTTTACAAAAAATCAAAATCTGATTCTTCATCTTAACGAAAAACATAAACAATGTGAATACTGTAAATACGAATTTGAAACTGCAGAATCTTTAATGCAACATAAAGAAATACATGTTAAAACCGGAGAAATGAAAATTTGTACCATAGGCAGCTGTAAGAAAATATTTTTAACAGAAACTGCATTTAGGAATCATATGGCTGTACATAAACTGGAAGCATTTAAATGTACAATATGTCCATACAGTGGAGTAAATGAAGTTGATTTGAAAATACATTCGCAAACTCATCCTAATAATTGTGATATATGCGGACTTATATTTATAAATAAAAATGAACTTAATGCACATAAACGAAATCATCCAAAAGAACAACAACTAAAGGCAAATTTTTTTGCTTGTGAGATTTGTCAACGAACCTTCTCGAGACAATCAAATCTTCAGAGGCATTTAGATATACATAAAGGAGCTGATCAAGTTTTTCGATGTACCATTTGTGGATGTTCTTATCATTATGTATCATCTTTAACTCGACATATTGTTCAGAATCATAAAATCAGAAGAAAGAGTGACTTAAAAGGTTTAGAAGACTCAAATGTAGCTCTAGTTTTTTAA
Protein Sequence: MSEISTEIELGTQYILNESEFILEPSELRTDDLNDVIYMDGHQAFLVNGQLLQNSGETPTLVLQEGEDINQYLINGDKGELLLANIKNDTINETQENQHIIHYIDEDGNITEPQEILYINENGDPITQENIHQYKLAELMETGNSLPVTEDELAAIIDSDSLSQQPNDDNSVMELNASDWYQFAVVQDQDFQYEIQSSEDSNQDFSALNINSPVDVSAITGKDHITGQVVTLESYMDRIQKKIKSTPLNSNYWKKPKHNLNAFLNKKFNLGVTLGGKRLVGKIVHVGTKDESTTNEIVPDTVTQINEVQDNNIEPYQECSLDWIKSMTGNLTPPKNNTQMLYQTKLLSKKSDQFQRISATLSNLMSKEDVNKQLIEKSLHIKIIDKFCDNTKKGTQNVCFISGYMESKIVYTGTESLEETWTFVPDTLTTESVRSQVNKKSQIKYTDVINLIIITKHQENMRFVKVILDPKSHTCGTCNKTFTKNQNLILHLNEKHKQCEYCKYEFETAESLMQHKEIHVKTGEMKICTIGSCKKIFLTETAFRNHMAVHKLEAFKCTICPYSGVNEVDLKIHSQTHPNNCDICGLIFINKNELNAHKRNHPKEQQLKANFFACEICQRTFSRQSNLQRHLDIHKGADQVFRCTICGCSYHYVSSLTRHIVQNHKIRRKSDLKGLEDSNVALVF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00057175;
90% Identity: iTF_00057175;
80% Identity: iTF_00057175;