Avir006799.1
Basic Information
- Insect
- Altica viridicyanea
- Gene Symbol
- CSRNP3
- Assembly
- None
- Location
- GWHAMMQ00000024:831423-838080[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.77 1.4e+04 -4.3 3.5 90 90 71 71 7 137 0.55 2 2 8.2e-104 1.5e-99 332.4 10.0 1 218 220 428 220 428 0.93
Sequence Information
- Coding Sequence
- ATGGGCTCTAATAATTCATCATCTTCATATATTAACACATCATTATCATCCACAACCGACATGTCTAACGAAAATGGTTCCGAAGAATCGTCAATCGACCAAGAAAATCCCACTCGGGACCAAGAAGCGCTTTCTACGAAAGCAGAACCTGATTCTAATAAAACAGAAACTTCCGCCGGTATTCTAAATACTTGTAGTACAAACTTTAAAGACAATTTAGAGTGTTCCGAGCAAAAATCAAACGATAAAGCAATAGCTAGTGATAAAAGGATAGATTTGCGTGAGGTTGTTACAAAAACTGAAGACGGCGAGGATTCTGCCACTGAAAGTTTACCAACTACGGAAGAGTTAATTGAGGAAACCCATGATAGATCAGATGGATCTGACTCAGGTTTGGGATCCGAGTTGAGCGAAGAAAGACCCCAAGAAAATCCCACTAACTTAGAAAGTGATAGCGAATCATCGGTTTTGTACAATACTATAACGAATACTCAATTTCCGGAATTTCCTGGACAAGCGACATTCACGCAGTACAGCGGAGAATCTTCATCAGATTTAGGATCAATTCTGGGCGATGCACAATCAAAAATCAAAATATCGAAGGGCAATCTTAAACGTAAATGTTCGAACGACGACAATGAAGAACAACCGAAAAGCAAGAAACGGAAATCAATCGCATTTGATAGCGTTACTGTGTTTTATTTCCCCAGAGCACAAGGTTTTACTTGTGTACCCTCTCAAGGTGGTTCAACATTAGGTATGGGCGCACAACATACTCATGTAAAAAAATTCTCAATAGCTGAACATGCAGTAGAGCAGCGTCGGATTCACAGACAGCTTCTACAACAATTGCGATCAGAAAGGAATGTCAACACAGGCAACGCGACATCCAGTGATGAAAGTGACAGTGAAGATGAAGCTAGTGAAGCTTCGGACACTGAAATGGATCCAGATAATTACTATTTCCTTCAACCGGTTGCAACTCGACAAAGACGCGCCCTTTTGCGTGCCGCGGGTGTGCGGAAAATCGACGCAGTAGAGAAAGACGAATGTCGAAATATTCGTACTTCGCGCGAATTCTGTGGTTGTGGCTGCAAAGGCTATTGTGATCCTGATACATGCTCTTGTAGTCAAGCAGGAATTAAGTGTCAAGTTGACAGGTTGAACTTTCCATGCGGTTGTTCGAGGGACAATTGCGGCAATTCGAGCGGCCGAATCGAGTTTAATCCTGTTAGAGTGCGAACGCATTTTATACACACACTTATGAGGTTAGAATTAGAGAAAGAAAAAGAAGAAAAGTCCGAAAACAAAGACACCCCACATTGGATGGACAATGAGAGATTAACCGTCCCGCAAGAACAATCGACATCAAGGAATCCAAGTAATAAATACAATAATAGTTTGTTACGTGATGTTACGCTTTCAGCAAATGTTGAGGCAGAAAATTGTGCTCATACTGGTAGCTTTACGAATTTTCATTACGGACCTCCAGGTGAAGATCCAGGGGGCCAGCTACCAGATCGAGCAGACTCGTTAGACCTGTACACTTTTAGGGAAAATTGTTATGTACAGCAAAATGGACAGGAAGAGAGGAAACAACCGTTTGCTTCATCCCAGGGTTTTCATTTTGCTAACGTAGGATTTAGTAACTATGTCAGTGGACCACAAAATCAGTATGCACAACCATACATGGAAAAAAATCAAGTGTACCAAAGTGGTTTTTCCGAATTCCCTTCACTCTTTACCCCATATGGAGGAATGTATGCTCCAGAATTCTCCCAAAAACCTTTAGATGGCGGCACGTTTCAACAAATAACGTATGAAAATTTCCCCAATGAGAATTTTCCAGAAACTAAGGAAAATCAATACACGAATTTGAACCCCGTACAATCAAATAGTAAATTAGAATCGTTCTCTGATTTGTTGAATGGAAGATATGGAGGATATTCGACTTACGAGGCTGATTTTAATACTCTGAATGATGAATGTTCTACTGGAAAGAATAATGAAAACTCGACTAGTAGTAACTCCGAGGAATGCGATGAAAACTTCGGAGAAATTATTAAAAAATCGATGGTCGAGACCGTTTCCGCGTAA
- Protein Sequence
- MGSNNSSSSYINTSLSSTTDMSNENGSEESSIDQENPTRDQEALSTKAEPDSNKTETSAGILNTCSTNFKDNLECSEQKSNDKAIASDKRIDLREVVTKTEDGEDSATESLPTTEELIEETHDRSDGSDSGLGSELSEERPQENPTNLESDSESSVLYNTITNTQFPEFPGQATFTQYSGESSSDLGSILGDAQSKIKISKGNLKRKCSNDDNEEQPKSKKRKSIAFDSVTVFYFPRAQGFTCVPSQGGSTLGMGAQHTHVKKFSIAEHAVEQRRIHRQLLQQLRSERNVNTGNATSSDESDSEDEASEASDTEMDPDNYYFLQPVATRQRRALLRAAGVRKIDAVEKDECRNIRTSREFCGCGCKGYCDPDTCSCSQAGIKCQVDRLNFPCGCSRDNCGNSSGRIEFNPVRVRTHFIHTLMRLELEKEKEEKSENKDTPHWMDNERLTVPQEQSTSRNPSNKYNNSLLRDVTLSANVEAENCAHTGSFTNFHYGPPGEDPGGQLPDRADSLDLYTFRENCYVQQNGQEERKQPFASSQGFHFANVGFSNYVSGPQNQYAQPYMEKNQVYQSGFSEFPSLFTPYGGMYAPEFSQKPLDGGTFQQITYENFPNENFPETKENQYTNLNPVQSNSKLESFSDLLNGRYGGYSTYEADFNTLNDECSTGKNNENSTSSNSEECDENFGEIIKKSMVETVSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -