Avir005060.1
Basic Information
- Insect
- Altica viridicyanea
- Gene Symbol
- Trerf1
- Assembly
- None
- Location
- GWHAMMQ00000019:1641354-1688960[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.1e-08 2.2e-05 24.5 0.1 2 46 1125 1169 1124 1169 0.96
Sequence Information
- Coding Sequence
- ATGACAAGACAGGGACAGTTAGGCGGTCTCGGAACCGGGCGTACGTTCGTGGTGAAGTGGGGGTCGGGGAGCGGAGGCGAGGAGAAAAAGACAGCCGTGAAGATAGCGGAGGTCTTTTCAACAACAACTGTAGATGATAAGAAACCTCTTAGTGCATCAGAGTTGGTTAAAGCGTCCTCCAAACGTGCCAGACCTAAACCTACATCGCCAACTAGGCAAGGTCCTCAACAGTGCCAGGTCTGTGCCAAAGTATTCGGTAACGCCTCTGCCTTGGCAAAACACAAACTGACTCATAGTGATGAGAGAAAATATGTGTGTAGCATGTGTGGTAAAGCATTCAAACGGCAGGACCACCTAAATGGACACATGTTAACCCACCGTAACAAAAAACCGTATGAATGCAAAGCAGATGGCTGCGGGAAAAGCTACTGTGATGCTAGATCTTTAAGAAGGCATACTGAAAATCACCATAGTTCTCCAGCAACGACAGTAAACACAGCAACAACAACATTATCACCAGCTCAAGGCGCCGCTTCAGGTGATGCTGCATCACCACATGGTTCTAGTTGTATCCAATATGCACCACCTCCAACCTCATCAACAACTCCTACCACCACGACAGTGACTGGTTCAAGCGGAAAAAGTCAACTACAACAACTCTTAGCATCTGAACCGTCTAAAAGCACTACCACTGGCAATAATGATGGGTTAACTAAACAACAGCTAGATCTGATACATCAAATAATGGAGCAAACTCAGAGACAATCGCAAGCCGTGGCGGCAGCGGCGGCGGGAAATAAATCTACAAAACCAGCAGCGAAATCACCGGGAAATAGCAAATCATCATCGAAGTCTCATCAAAGTAAATCCTCATGGTTAACAAATAGTAATCAACAACAACAACAACCAACAAATAAGAACAGTAACAATTCCTCAACAACAGGAAATTCGAGTCCACAAGCTAAGGTTACAACATCCACACCTACATCACCAATAAATTCTACAACGAATAAAACAGAACCAAAACCAGTTGAATGTAATTTGTGTCATAGAAAATTTAAAAATATACCAGCGCTTAATGGACACATGAGGCTACATGGAGGGTATTTTAAAAAGGATTCTGAAAACAAAAAATGTGAAAAAAAAGAAGTAGCGGGTCCACCCCTCCAAACAGCGAGTTTTAGTGTACGAGCATTAATAGAAGAGAAGATAATTAATAAAAGGATAACAAACACACCTCAACCATCATCTGATGATCAAAAATCCAATGCCCCACCTCTTTTTCCTTTGAACGTGCATTCCTCTTCATCGAATACTGACCTAGAATCGAAGATATCTTCGTTCGTGGTTCCGGCTCCTCCACACCAAACTACCGATAAATCCCGAAGACATTCCGATGCAGAAACTTTCCGCAGCTCGACCACGCAACAAGAAGCACACGCACTGGCTGATCTTATACTTAAACGAGAAAAAGGAACAGTTAAAAGAACTACCTCAGATCCAGGTCAGTCATCACCTATTATAAGGTTCCAATCAAATGATTCATTTACATTGGCTAACGTTACGTACCAATCGGAAGAAGCTGAGTTTATATCTTCAAGTTTGCAAGAAGGAGTTTTTACTCAAGTACAAGATAGTATGCTTTTACAAGGTGTTGATCCCTCGCAATTAGCCACATTGCAGTTCCAAGCTGAAAGTTTGTTACAAGAGAAAAACGAACAGCTAATACAACAATTTAAAATTGAAGAAATTGATATTGAAGAACCTGTAATACAACAACCTGCACCGTATCAACCTAATTCTGTTAACCAAGAGTTACAGGCAGTTCTGGATTCTCCTTTACCTGAAAGTTTAGCTGAATTCAGCACGTATCATTCAACTAATAGTATTGATATGCCTTCTCCTAGTTATCAAACACACTCACCTGCGCAGTATTCACGATCACCACATACAATTACAGCGCAATCTCCCTTACAAAGTCCTCTAATAAGGCACGATTCACCTGGATTTGCTTATCCAACACCACCGGCAAGTCACGAAGGACAAAGTCCAGGATTCGGACAGAGCACCATGCTTCCAATGGTATCTCCAAACTCTCAAGAATTTGGACAAATAGTAGAAAGAGGTGTTTACGAAGAACCCCCACAAGCATCTTCTCCACTATCTGCAGCTTTCTTCACATCAACAATGTCGAGTTCAGCGGCAGTAGAAGAAGCATTAGAAGAAGTTTTACCAGGAGAACCAATTTATCCTCTAACAAATTCTCCTTCACCACAATCCCCATTAGGTTTAACTCCAGTTCCTTCTCCAATATCAAATATAGCAACGACAACAGATCACTCCCAACCTTCAACTACATTCACATCTTCTCCAAATACTTCCACGTTCTCAATGTCTGGAAATTGGTGTAACGGTGTTATGCTTCCTAATTCGGACGATCCCCTACTATCCAGCAGCCCGAAAGATTTCGTACCAAGAAAGAAAATAGAATTAAATGGAGTTCCACTTAGGCTAATTAGTAACAACGGTCTAATTGAAATAAATAGCTCAAACTTTGCCGGAATTTTAGTGGACGCAAACGGCGAGATTAAATTCATACAAGCAGGAGGCAACAATTTTCAAGCAAAAAATATTTTGTTAACAAATGCTCCTTTAATCACTCAAGACAGTGGTAGTGATGATAAAAATAAAAAAGTGATAAAAACGGTACAATGCTCTATTCCAACGAAACAGCTCATCAATAGGCCTAAACAAATTATTGAAATTAAAAAAGAAGAAAACAACGATGTTTTTTTAAGTCCTACTCTGATACCTGCTAGTCCTGTAAGAATATCCAGAAAACGGCCTAGAACCGAACCCCTACAATTACCTGTGTTACATCAATCTAAACTTAGAGCAACAAGGAGTAAACCTCCTGGTTCAGCAAGGTATACTCCACAACCTATACTCAATCCTCACAGACCAGGCAGTGGTCTCTATGGAAATTTAAAAATTAAAACTGAAGATGGTATAAGTTGGAGCAACGAACCAATCCCAGAGAGCGATTCAACTCCTCACGTTAATATAGGACCTCAGTTTCAATGTAAAATTCCAAATTTTTCACCTGCAGTTAGTAAAAACAGTCCAAAACCGACACATGAAGATTTACTTTGGGATCCTGGTATAAATTGTTGCACAGATAGTGAAGTTGAAATGTACCTGGATTTCGCTTGTTGTGCTGCTGTGCCAGGTGGTGGAAGGAATAAAGAATATGCCATGCATCTTCTTCATATGTGTGGTGGTAATATTCATGATGCTATGTTACGGTTAATGCAACCTTCACCGAATCTTCCACCTGATCATCCTCTTCTAGCGTATCAGTATTGTGAAAGTGACAAATGGTCAACGACAGAAACAGATATCTTCCATCGGTCACTGCTCAAGTACGATAAGGATTTCCGCAGTATTGCTCAAGAGATTCGGACGAAAAGTATCAAGCAATGTGTGCAATTTTATTATGTATGGAAAAAGGTTTGTTCTGATGAATACCGAAGGTTGAAACATCTTCGGGAAAGGAGGGCAAATTATTATAAAACTGTTGAACTAGATCTGGATGAAAAGCTTTACGTTGATGCTAAATTATTAGGGATTGCAGATAGTGGGTCACCGATATCAATACCAGACACCAGGAATTTTGTTTGTGAATTCCCCGACTGTTCCGCGAGTTTTAATTCCCGTGCGGCACTCAACGGGCATATACGAATACATGGAGGTACGTCAAGAAACTCTCCAACACCTTCCTCGACAACTTCGTTGGAAAGGCGAACAATGCCCGTAACCTCTTCCAGCATGTGTCATCCAGACTCAACCGAAGAGTATCCCTGTAAGATTTGCGGGAAAGTGTTTTCAAAAATCAAAAGTCGAAGTGCCCACATGAAATCGCATCGACCTCCCGACGCTGAACCAGTTAAGAGAAAAGAAAAGGAAACCCCTTCTTCAACAAGCTACGAACTTTCCGTGCCAAGCCCGTTTAGTACTTAG
- Protein Sequence
- MTRQGQLGGLGTGRTFVVKWGSGSGGEEKKTAVKIAEVFSTTTVDDKKPLSASELVKASSKRARPKPTSPTRQGPQQCQVCAKVFGNASALAKHKLTHSDERKYVCSMCGKAFKRQDHLNGHMLTHRNKKPYECKADGCGKSYCDARSLRRHTENHHSSPATTVNTATTTLSPAQGAASGDAASPHGSSCIQYAPPPTSSTTPTTTTVTGSSGKSQLQQLLASEPSKSTTTGNNDGLTKQQLDLIHQIMEQTQRQSQAVAAAAAGNKSTKPAAKSPGNSKSSSKSHQSKSSWLTNSNQQQQQPTNKNSNNSSTTGNSSPQAKVTTSTPTSPINSTTNKTEPKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDSENKKCEKKEVAGPPLQTASFSVRALIEEKIINKRITNTPQPSSDDQKSNAPPLFPLNVHSSSSNTDLESKISSFVVPAPPHQTTDKSRRHSDAETFRSSTTQQEAHALADLILKREKGTVKRTTSDPGQSSPIIRFQSNDSFTLANVTYQSEEAEFISSSLQEGVFTQVQDSMLLQGVDPSQLATLQFQAESLLQEKNEQLIQQFKIEEIDIEEPVIQQPAPYQPNSVNQELQAVLDSPLPESLAEFSTYHSTNSIDMPSPSYQTHSPAQYSRSPHTITAQSPLQSPLIRHDSPGFAYPTPPASHEGQSPGFGQSTMLPMVSPNSQEFGQIVERGVYEEPPQASSPLSAAFFTSTMSSSAAVEEALEEVLPGEPIYPLTNSPSPQSPLGLTPVPSPISNIATTTDHSQPSTTFTSSPNTSTFSMSGNWCNGVMLPNSDDPLLSSSPKDFVPRKKIELNGVPLRLISNNGLIEINSSNFAGILVDANGEIKFIQAGGNNFQAKNILLTNAPLITQDSGSDDKNKKVIKTVQCSIPTKQLINRPKQIIEIKKEENNDVFLSPTLIPASPVRISRKRPRTEPLQLPVLHQSKLRATRSKPPGSARYTPQPILNPHRPGSGLYGNLKIKTEDGISWSNEPIPESDSTPHVNIGPQFQCKIPNFSPAVSKNSPKPTHEDLLWDPGINCCTDSEVEMYLDFACCAAVPGGGRNKEYAMHLLHMCGGNIHDAMLRLMQPSPNLPPDHPLLAYQYCESDKWSTTETDIFHRSLLKYDKDFRSIAQEIRTKSIKQCVQFYYVWKKVCSDEYRRLKHLRERRANYYKTVELDLDEKLYVDAKLLGIADSGSPISIPDTRNFVCEFPDCSASFNSRAALNGHIRIHGGTSRNSPTPSSTTSLERRTMPVTSSSMCHPDSTEEYPCKICGKVFSKIKSRSAHMKSHRPPDAEPVKRKEKETPSSTSYELSVPSPFST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01015119;
- 90% Identity
- iTF_00057169;
- 80% Identity
- iTF_00057169;