Avir016520.1
Basic Information
- Insect
- Altica viridicyanea
- Gene Symbol
- Ncor1
- Assembly
- None
- Location
- GWHAMMQ00000088:486087-552116[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-07 0.00014 21.9 0.0 3 43 383 423 382 425 0.97 2 2 2e-06 0.0021 18.1 0.5 3 31 807 835 806 842 0.91
Sequence Information
- Coding Sequence
- ATGTACGGGGAAATTAGATGTAGTGAATTAAGTCCTTTTCGTAAAGTCTTGTCAACGTCCCATTATGCCATACCACATCAAAGACACAGCAACAGCAGCAGCAACAACAACAACAACAATCTTCACCGGCTCCTCCCCTTTCATCATCGCGACTACCGACAAAATCGGATTTCGTTGCTTCATCCGGAATACGGGCCGGGCGGCAGGCCCAGGCCACCACCCGATCACCACCAACAGATGCCGAACATCCAGTCGGGGGTGGTGTGCGGTGATGGGGGCGGCGCCGTCGCAGGCATCTCTGCTAGTGGAGGACTCTCGAGCGGCCAGCAACCGCTGAAGAAAATGCGATTGCAGGACAAAGAAGGATTTCTATCGCTTTGGATTGACACGCGGCCGGGAGCGTATAATCCTCAAGTTGAAGCAATTTCACCCACGTTCCCAGATCAGTTAACTCAGGACGATCAGGCATTTCGAACAACCAAAGACGAACTTATCCAACAGATTGGGAAGGTCGATAGGGAGATTGCAAAGGCCGAATCACAAATTGCAATTTTAAAAAAGAAACAAGCTGAACTTGAGGAAATAGCCAACAAACCAGCTGTTAAATCGGAAGTTGAGGAAGTTACGACGCCGAAACATCAGAGTTTACCACAGAAAATTTATGCTGAGAATCGGAAAAAGGCACAAAGTGCACATGGGCAACTGGACCCTTTGGGGGCGAAAGTAGAATGGCCAATGTACAACCAACCCAGCGATGCTCCCATTTATCATGAAAACAAACGGAGAAATAAAGAATCGAGGAATTCCTATTTGACTGAAACTTATAGTAAAATGATGCAAGATTGGCTTAGGAAGGTGGATAAAATTGAATCTAGTACAAAAAGGAAAGCAAAAGAGGCGAAAAATAGAGAATTCTTTGAAAAAGTGTTTCCGGAGTTAAGGAAACAGAGGGAAGATAAAGAAAGGTTCAATAGAGTAGGGGCTCGAGTAAAATCTGAAGCTGACATGGAGGAAATAATGGATAATCTTCAAGAACAAGCTCTTGAAGACAAGAAAATGCGGAGCTACGCTGTTATTCCGCCCATACTTCTCGACCAACGCGAAAAGAAAGTTAAATTCGACAACAACAACGGTTTCTTTCTCAATGTGTGGTCGAATTCCGAAAAGGAAATCTTTAAGGAAAAGTATCTTCAACATCCGAAGAATTTCTTTGTTATAGCGTCATATTTAGATAGAAAGTCGGTGTCTGACTGTGTACAATACTATTATTTAAGTAAGAAGACAGAAAACTATAAACAGTTATTTAGAAAAGCGCGACAGCGGACGAGGAGCTCCAGAAATAACACACAGAAAGTTAATAGTAGTGCCAATGCCTCTGTTGTTGATATTTTGACGACAGGTGTAACTACTCGCCTCCAACGAGAACAACAATCGAAGACTGTTATACCAGCGTCGCAAACCGACTCCGTTAACCAGCCTCAACCTCTAGCAAGTGAACCTCCAGCTTCTGCCGCCACTCCTCCAGCTGCTTCAACTCCAACACCTGCAGCAACCACAACGACACCCACCACAACCTCAATGGGCAGTCCACCCAGTATGGCCACCACGACACCAACAACCGCAGGCGCTATGCCCACCCCGTCACCTACCGCGTCCACCACCTCGGAGATGGTATCCACAAGCACCTCTGTGATTTCAATAACTCCTACAGTGACAACGTCGAATTTAGAGGGGGAAAGTGGTACTGGTGCGGTACCTCAGGAGTTGAGTTCTTCTACTCTGATTTCTACATCCCCAGAGGATACGAAGCCAAAGAGTTTCCTCGGGTTTTCTGGGACGGCAGTAGCAGTTTCGTCCGACGAAACAGCAGGTGCTGGTGGAAAAGCTGCTGTTGACGAGGCAGCAAGGGAGGGAAATGGAAGTGCGATTACAGCTGATGATGGAATTAAACAAGAAACTATTAACACAAATTTTTTTTTGTCTCTCTGTATATTTGTCGGGGGAGAAATTTTTATACAACAATCTATACGCCACGCAAACGACGTCGTAAATAAAACGATCCAAGGGAACTGCGTGTTGTGCCAGGCACAACTAGGACCTCAACTTCATTCTAGACCTTTAAGTTCGAATCAAGCGTCTTTATATGGATTACGTGAAGATCAAATAACGTCTGATTCGAGAGTATGCAACACATGTCGCTGCAAATCTGTTCGGTCCCGTTACACCCACTGCCCTCTACCTTCTTGTCCCAATTCACGTGGAAGAGTAAAACGATTAAGATCGTTTCCAGATAGATTCCAAGATCTACCAGCAGATGTCAAGGAACCGCTTTTAGCTGAATTCCGTGTCCCTAGTGGTGTTACGAAATGTTGTTCTGCTTGTTATAATAGAATTCAGCGCAGATTAGGACCTGTGGAAGATTGGTCAGAAGAAGAATTTAATAAACTTAAGGCAGCTCTTACTGAATTAGGTTCAAACTGGCAATTAATTGGAGAGAGGTTAAATAAACCACTACAGAAAGTGAAGATGTTTGTAGCGGCAAATCGAAAAAAGTTAAAAAATTGTTTTGGGGAAGACCGTAAGCCAGCTCTATCTACTGATGAAGAGAGTGGTTCGAGCACTTCTAGTTGCGACGAGCCGTTAATAGATGGCGATAGACATTCTAGTGACACAGCTAGTGCTGCTGAAAGTCCTCCTGTTCAGAGCTCGAATGATAGTGCAACAAAAAAAATTGATTACGATTCAAGTGCAACGGAAACAGCAGATGAAGCTCAAACGCCAGATCACTATCAAGGTTCAGCAACTATAACACCTGTCACTAATGACGGGCAACCATTAAGTGTTAAAGATCTCGTATTAAATGTGATAGAATTTTCTCTAATGAAAAATCCAGGAGGACAGCAGCACACACCTAATCCTCCTACAAGTGGAATGGCTCCAACCATTTCATCAATATTAAATAATGATTCCAATGAAGTCACTATAGTAAGCGAATATAATCTTAATAATATGAATAATCAACAAAGACAGCAAATGCAACAGCGTTCTGATTTAAACTTAGCAAAATTGGTAACACCCTTAATAGGTGCGACAATAACACCTGTTTCTGGTCCGATACAGACTCAACCTCAGCCAGAACCTATGCAGACTTCTCGAGATGATTTAATAGTTTTACAAGTTCAAGATGGAAGAGAACCAGAAACGTTAGATCTTAGTATAAAGAAACCTCGTGAACCACCTCCACCAGCTCATAGTAAACATCAGCCACAACCCCAACAACCACAAATGCATCGTACTGATCCTTATATGTATCACCAAGAAAGAAAAAGTCCTGCTTTTTCAATAAGATCACAACCTAAAATATCTAGTCCGAAACCTGCTAATCCAAAATCTGGCTCAATCACTTTAGGAACTCCGATTATGTCTCAACCTCGCTATGACGTTTTACGGCAAATGCCTGAAACTAAAATGGGTTCTATTACACAAGGTACTCCTGTTATCCCACATAATATACAGGAGAAAAGAGTGTATGAGTATTTTAACAAGCGAGGACCTGTTCCACCTCAACAAAGTCAAAATCAACAATTACAATATCCAGGACAGTATAGACAACCTGCTTATAACGTTGAACAACAATTAAGTTCTAGACAAATAATCATTAATGATTACATTACTTCGCAGCAAATGTTGGGTAGAAGAAATGAGAAATCTCAGTATTATCCTGCTAACTCACCGCATCGAACTCCTCCTCCTCCTCCTCCTCAGCCTGGCCAGCAGCAAAGACAAGGTGTTATTCAAAGGCATACACGACCTCAATATTTACCACCGGGACATGAAGCTTTGTCATCTTTAGTTGATGTAGCTGTTCAGCAACCGTCTTTACCTGTACCAAGTGCACATGAAGGTCTTGGTAAAACAATGGCTGATAATATACTAGAACAACCTCATAGATATCAGATGATTCAACAACATCAGCAGCAACAAATTCGTCAACAACAACAAAGAATAGAGGAGCAAAGGAGAGCGGTTTATCATCAAGCTCAGCAGCAGCAACAGCAACAACAACAGCAGCAGCAGCAACAACAACAAACACAGCAGCAACAACAACATCCACAAAGTAGACAACAAACGAGACCTGAAAATAGTACTTTAACTGCAGCCAGTTTAATTGACGCTATTATAACTCATCAAATAAATCAAACGGCTGAAGGAGGTCGAGAGGTTGTTGCAAATGCTCGAGAACAAAGAGCAGGAGATTTACTTTTCCAAAAGTTTCATAGAGGAGAGCCACCTCCTCAACAGGGTCAGGATAACGGAGAAAGGCCACCTTCTGTTATAAGTGTTGATTTAGATGGTGATTCGGTAAATAAGAGTTTAACAGTAAAAGAATTAACTGATTCTGTTATAAGTCACGATTTTGGTACTAGACAGCCTTATTATCATATACAAGAAAATATGAATGATCAGTGGAAACGAAGAATGCAACATCAACATCATAATGACGATAAGCGTTCACAAACACCTTTACAAGATGAGAGGCAAATAATTAGAATCGCTCAACCTCAACAGAAATATATAGAAAGGGTGGAGTCTGTTTCGCCACCTGATAATAATCATTGGCCTGAACAAAATTTTCGAAGGTATCCTCAGAATCAACCGCACATCACTCCTTTAGATTATGTGAAGAACCGAATCGTAGAAGTAATGAGATCAGAGGACGATAACAAAAAAGATATTCAGGATGGATCTCATTCCCAAGATAAGGATCGCAGTGATAGTCCTGGAGATATGGTGATTGATGAAGAAAAACACGAAAGTGATTTTAATCAACAACAACAGCAAAGCGGCTTCTATTCATTTGTTCATAAAGACAACACTGCCAATGATAATCCGAGAAATAATGAGCCCAAACCTCTGTTGAGTGCGCAGTACGAACCGCTTTCAGATGAAGATTAA
- Protein Sequence
- MYGEIRCSELSPFRKVLSTSHYAIPHQRHSNSSSNNNNNNLHRLLPFHHRDYRQNRISLLHPEYGPGGRPRPPPDHHQQMPNIQSGVVCGDGGGAVAGISASGGLSSGQQPLKKMRLQDKEGFLSLWIDTRPGAYNPQVEAISPTFPDQLTQDDQAFRTTKDELIQQIGKVDREIAKAESQIAILKKKQAELEEIANKPAVKSEVEEVTTPKHQSLPQKIYAENRKKAQSAHGQLDPLGAKVEWPMYNQPSDAPIYHENKRRNKESRNSYLTETYSKMMQDWLRKVDKIESSTKRKAKEAKNREFFEKVFPELRKQREDKERFNRVGARVKSEADMEEIMDNLQEQALEDKKMRSYAVIPPILLDQREKKVKFDNNNGFFLNVWSNSEKEIFKEKYLQHPKNFFVIASYLDRKSVSDCVQYYYLSKKTENYKQLFRKARQRTRSSRNNTQKVNSSANASVVDILTTGVTTRLQREQQSKTVIPASQTDSVNQPQPLASEPPASAATPPAASTPTPAATTTTPTTTSMGSPPSMATTTPTTAGAMPTPSPTASTTSEMVSTSTSVISITPTVTTSNLEGESGTGAVPQELSSSTLISTSPEDTKPKSFLGFSGTAVAVSSDETAGAGGKAAVDEAAREGNGSAITADDGIKQETINTNFFLSLCIFVGGEIFIQQSIRHANDVVNKTIQGNCVLCQAQLGPQLHSRPLSSNQASLYGLREDQITSDSRVCNTCRCKSVRSRYTHCPLPSCPNSRGRVKRLRSFPDRFQDLPADVKEPLLAEFRVPSGVTKCCSACYNRIQRRLGPVEDWSEEEFNKLKAALTELGSNWQLIGERLNKPLQKVKMFVAANRKKLKNCFGEDRKPALSTDEESGSSTSSCDEPLIDGDRHSSDTASAAESPPVQSSNDSATKKIDYDSSATETADEAQTPDHYQGSATITPVTNDGQPLSVKDLVLNVIEFSLMKNPGGQQHTPNPPTSGMAPTISSILNNDSNEVTIVSEYNLNNMNNQQRQQMQQRSDLNLAKLVTPLIGATITPVSGPIQTQPQPEPMQTSRDDLIVLQVQDGREPETLDLSIKKPREPPPPAHSKHQPQPQQPQMHRTDPYMYHQERKSPAFSIRSQPKISSPKPANPKSGSITLGTPIMSQPRYDVLRQMPETKMGSITQGTPVIPHNIQEKRVYEYFNKRGPVPPQQSQNQQLQYPGQYRQPAYNVEQQLSSRQIIINDYITSQQMLGRRNEKSQYYPANSPHRTPPPPPPQPGQQQRQGVIQRHTRPQYLPPGHEALSSLVDVAVQQPSLPVPSAHEGLGKTMADNILEQPHRYQMIQQHQQQQIRQQQQRIEEQRRAVYHQAQQQQQQQQQQQQQQQQTQQQQQHPQSRQQTRPENSTLTAASLIDAIITHQINQTAEGGREVVANAREQRAGDLLFQKFHRGEPPPQQGQDNGERPPSVISVDLDGDSVNKSLTVKELTDSVISHDFGTRQPYYHIQENMNDQWKRRMQHQHHNDDKRSQTPLQDERQIIRIAQPQQKYIERVESVSPPDNNHWPEQNFRRYPQNQPHITPLDYVKNRIVEVMRSEDDNKKDIQDGSHSQDKDRSDSPGDMVIDEEKHESDFNQQQQQSGFYSFVHKDNTANDNPRNNEPKPLLSAQYEPLSDED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -