Avir001301.1
Basic Information
- Insect
- Altica viridicyanea
- Gene Symbol
- dnajc2
- Assembly
- None
- Location
- GWHAMMQ00000114:677198-679590[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 7.8 8.1e+03 -3.0 0.6 6 14 301 309 300 311 0.59 2 3 0.00038 0.39 10.8 0.0 3 31 438 470 436 473 0.86 3 3 2.4e-13 2.5e-10 40.3 0.1 3 44 566 611 564 613 0.91
Sequence Information
- Coding Sequence
- ATGGGAGAAGCTAGAGCAGTTAAAAACGATATTTGTAGTACAGTTGCAATTAGATATCGATTTGTATATGAAAATGTTGGTGGTGGAGAACCTCAGCTTCAATTTAAACATCATCCTTTGATAAAATTAGAAGTTGAGTTGCCCAAAAATGACAAAGGAGATGACTATTTATCTCCAGAAAATGTAGAGTATGAGGATGATGTAGAGTACTTACGAAGCTTGGATCCAAAAGAATGGAAGAGCCAGGATCACTATAAAGTATTAGGTATTCAAAATCTACGGTATAAAGCTACAGAAGAAATTATTAAAATGGCTTACCGAAAGAAAGTATTGAAACATCATCCGGATAAACGAAAGGCGTTAGGTGAAGAAGTTAAAACAGATGATGATTATTTCACCTGTATAACAATGGCTTACGAAACTCTAGGAAATGTTAGTAGAAGACGAGCATATGACTCAGTTGATCCACATTTTGACAATAATATACCATGCACGAGTGATATAAAAAAAGACTTTTATAAAACATTTAACCATTATTTTGATTTGAATTCACGTTGGTCAGAAAAAGGTGTAGTTCCTAAATTAGGTGATGAAAGTTCTTCTCGGCAGGATGTGGAGCATTTTTACTCTTTTTGGTACGATTTTAAGTCTTGGAGGGAATATTCATATGAAGATGAAGAGGATAAAGATAAATGTCAAGATAGAGATGAAAGAAGGTACGTAGATAAATTAAATAAAGCTGAACGTCTTCGAAAGAAAAAGGAAGAAATGTCAAGAATTCGCCAATTAGTAGATCTCTCTTATAATAACGACCCTCGAATCGCGAAGTTCAAACAAGATGATAAAGAAAGAAAAATGGCAGCAAAACGTGCAAAACAAAATGCGGCTCAAGCTAGAAAAGAAGAGGAGGAACGGATACTACGGGAAGCACAACTTGCTAAAGAAAAAGCGGAAGCAGCAGAGCGTGCTAAAATCGAAGCTAAAAGGCAAGAAAGAGAAGTGCAAAAGAAAGCTCTGAAAAAAGAAAGAAAAATACTTAGAGATATTTGTAAAGCTAATAATTATTTTTCTGAAAATGCTGGCCAGAATTTAACATACATGACAGCAATTGAAAGTATATGTGAAAGGTTATCGTTAACTGAATTAGAAGATCTCAATAAGAATTTAAAAAATAATGGGAAATCTGCGTTTTTCAAAGCTGTTAAAGAAAATGAAGCTAGTTTAGAAAAGGAACGTTTGGAGGTCTTGCAAGCTGCTAATAATCAGAAATCTAATTCTGATAATACTCCTGCTGTAGTATTGGTAGCACCAGAATGGAATGAAGAAAATATGCAATTACTAGTCAAAGCTGTTAATTTATTTCCAGCTGGTACCAATCAACGATGGGATGTAGTAGCAAATTTTATTAATCAGCATGGTGTATTTTCACAAAATACTAGTAAATTTAATGCAAAAATGGTACTAGCGAAAGCAAAAGATTTGCAAAATACTGATTTCTCTAAAAACAATCTAAAAGAAGTAGCCAATAAACAAGCTTTCGATAATTTTAAGAAAGATAAGAAAACCGTCCTTAATATTGATGAAAGTGGTATTTCTAAAAAGTTGGATGAAGTTAGTCTCAGTGAAAATGGCGAAAAACCCAAAAAGGTCACTTCCAACGGTGACATAAAATCGAAATTAGAAAAAACAGATCTCCCGTGGACAACATCTGAGCAACAACTTTTAGAACAGGCCTTAAAAACTTATCCGGCATCAACTGCTGAAAGATGGGATAGAATAGCTGAGTGTATACCGAACAGAAGCAAGAAAGACTGTATGAAGAGATATAAAGATTTGGTAGAAACCATTAAAGCTAAAAAAGCAGCACAGGCTTCTATTACTACTAAATAA
- Protein Sequence
- MGEARAVKNDICSTVAIRYRFVYENVGGGEPQLQFKHHPLIKLEVELPKNDKGDDYLSPENVEYEDDVEYLRSLDPKEWKSQDHYKVLGIQNLRYKATEEIIKMAYRKKVLKHHPDKRKALGEEVKTDDDYFTCITMAYETLGNVSRRRAYDSVDPHFDNNIPCTSDIKKDFYKTFNHYFDLNSRWSEKGVVPKLGDESSSRQDVEHFYSFWYDFKSWREYSYEDEEDKDKCQDRDERRYVDKLNKAERLRKKKEEMSRIRQLVDLSYNNDPRIAKFKQDDKERKMAAKRAKQNAAQARKEEEERILREAQLAKEKAEAAERAKIEAKRQEREVQKKALKKERKILRDICKANNYFSENAGQNLTYMTAIESICERLSLTELEDLNKNLKNNGKSAFFKAVKENEASLEKERLEVLQAANNQKSNSDNTPAVVLVAPEWNEENMQLLVKAVNLFPAGTNQRWDVVANFINQHGVFSQNTSKFNAKMVLAKAKDLQNTDFSKNNLKEVANKQAFDNFKKDKKTVLNIDESGISKKLDEVSLSENGEKPKKVTSNGDIKSKLEKTDLPWTTSEQQLLEQALKTYPASTAERWDRIAECIPNRSKKDCMKRYKDLVETIKAKKAAQASITTK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00436852;
- 90% Identity
- -
- 80% Identity
- -