Avir003467.1
Basic Information
- Insect
- Altica viridicyanea
- Gene Symbol
- Mblk-1
- Assembly
- None
- Location
- GWHAMMQ00000151:882024-904315[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.9e-17 9.3e-15 54.0 0.0 1 44 187 231 187 232 0.94 2 2 4.4e-18 1.4e-15 56.7 0.0 1 43 540 583 540 585 0.95
Sequence Information
- Coding Sequence
- ATGTTTATTTCATTACAGAGTCCCCGTCTTTCGGACTCCGACACTTCCGATAGTCATAGTGACAGCGAAGTGCCCACATCTTTATTAACTACCTCTCGGGGGTTGTTAAACAACCACCATCATCACAGATCTAATATACAAAATCCAATCCCGCGTCCATCGGCGATGACAACGATAGATAATATGTCGATGGCTGCATCACTAGTGGCAGCACTGTCGGGTGGTCCAAGTCCTGTTGGAACTCCCGCTCCCAATCTGTCATTTTACAATCCCACCATCATGACACACAATTGGCTCCAGTTTGCCAACGTTGCAAGATCTTTTCAAAACGTTACCGCACTTAACGAGGAGAAAAGCAACGGAAATGTTGGTAGCGGTGAGCAACCCTTAGATTTAAGTAAAGGAGCGGGAAATAATCACAACGTACCTAGTAGCGGAGAGCAAAGAATGGCGATAGGGAATAATGTAAGGTTATCTGCTTTGGAACCAAGGCATATATTCAATTCTGATTCCAGAGCCAAACCTAGAATGTCCGCAGTGACTGGCCGAAGAACTTACACTGAAGACGAGCTACAGGCAGCCTTAAGAGATATCCAGTCTGGAAAGTTGGGTACACGTAGGGCAGCAGTGATCTACGGAATTCCTAGATCCACGTTGCGAAACAAAGTATACAAACTAGCCTTAGAACGCGAACGGGAATCGCACCTGAAAACGTCATCTCCGATGGAAGACGAGACTATGGAAGACGACAAAGATTTGTCGGGGACAGAAGAAGAGAAGGAAGTGGAAAAGGCTTTACAGGGTCCCTTGTTTACGATCTCTGACTTTGTTAGAATGACAGCTGGTACTAGAGATATCCCGGAAGCCCTAAAGACAATTTTACAAAAATGTAAAGATGGTCAGGATTTATGGGGAAGTCTAGATCATAGCGAATTAGGTCAATACCTTCATCTCCTCGCTACGCAGAATTTACCACCGAATCAGAAGCCATTAGATGGCGCACTGATGAATAATATGGTACCAGCGTTGATGAAAGGTATGTTGGCCGACGAACAATTACTTAAAATGCAGAACAACGGTGACAGCGAAAAAATCACCAGGCCGAGTCCGAGTAATTCAGTAGTACCGCAGCATGATCGAATGAAGACAGAGCCAGATATGGAAACCGATGATTCTCCATCGAATGTGATATTAAAAATTCCGTCCTTTAAACCGACGACGTCGAGCAAAAATGGATGTGATGGGATACGAACTCAAGTAGAACACACAGGTAGTATAATGTCCCCGCCGGTAACTAGTGAATCAGGATCTCCTCCAATTTTACCACCAAAAGGACTTATAATTAAAGACGTAAAAGATGTGATTGCTCAAAGCATTAGTCAAAAATTCCAACAATCGATGGAGCCAAGAAGGCCGATAATCGATATGGACTTCAAAAGAGGAGGTTTTACTCCTCCTCTCGGAACAGGAATATCTGTAATCAAAACACAACAGGACCTCAACAGACAGTTTCAACAGCACCATCAACAACAATCTTCTAAACCACAACACAGTACTAACAGTACACCGACAGGTGGTAAGGGTACGAGGCCGAAACGTGGTAAATATCGAAATTACGACAGGGACAGTTTGGTTGAAGCAGTGAGAGCAGTGCAACGGGGTGAAATGTCAGTGCATAGAGCGGGTAGTTATTACGGTGTGCCTCATTCCACTCTCGAATATAAAGTTAAAGAAAGACATTTAATGAGACCTCGAAAACGCGATCCAAAACCAAATCCAGTGGACGAAAAAATAGCAAGTTTAAAACAAAACGACATTCGTAATTCGCAAGAAAAAATGAAGTCGGTTATGAAACCGCAAAAGTTTTCGCCCACATCGCCTAACGGAATGAAACTACCGCTATTCGAGCCAGGAATGGCACCTCTCGCGGGTTACAGCGGAGCCCCGTTTCCCTTCTGGCCTCATCCAGGTTTTACGCCCATTCCTTTAGATTACGCTAGGAATCCGACATCATTTCCTGGACACAACCCGGAGTTTTTTGCGTCTCAAATGATGCAGAAACTTCAAGAAGACGCCTCACGAAGTGTACCACCACAAAGTGCTGGTAGTGGTCCTACGCTTTCAAAAAATGCTAGACAAAGAGCAGAATCCTTGTTAGAAAGTACAGCGGCCAACGGTTCATTCCTGGATGGTATTATAAGATCAAGCTTGGAATCAGGAGTTCCATGTAGTGAAGAGAAATCGCGAAACGAAGACAACAATGTAGCGCCTGAAAATATGTCTAATAAAGCCTTATTAGATCAACTTTGTCGAAATAGCCGATTAACGCCTTTATCCAAACCACCAACTTCAGAAGGGAATCATAGTTCAGAAGACGAATCTTGTCGAAAAAGTACGAGTCCTTTGAATTTTGCTACAGGTGAAACCTCCCAAGATGACATTGATGACGATTCGTCATCAAGATTTGATAAAGACAGTTCCGAAGTTCATACTATTGAACTTTCAAATGATTCCAATACTTCAAGCGAAAAAAGAGTTCATGAAGAAGAAAGAAAACACCCCAGGATATTCTTAAAACAGGACTTGGTTAAACCTGAAAACCTCAAACCGGAAATGCTGGTACGTTTTCGGGAAGTCTTACCCGTTATGGACCATAATGGTGTGGCGGAAAGTGCGCCTAGTAGTGCCTCAGAAAACGACGGGCCCCAAGACTGA
- Protein Sequence
- MFISLQSPRLSDSDTSDSHSDSEVPTSLLTTSRGLLNNHHHHRSNIQNPIPRPSAMTTIDNMSMAASLVAALSGGPSPVGTPAPNLSFYNPTIMTHNWLQFANVARSFQNVTALNEEKSNGNVGSGEQPLDLSKGAGNNHNVPSSGEQRMAIGNNVRLSALEPRHIFNSDSRAKPRMSAVTGRRTYTEDELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLALERERESHLKTSSPMEDETMEDDKDLSGTEEEKEVEKALQGPLFTISDFVRMTAGTRDIPEALKTILQKCKDGQDLWGSLDHSELGQYLHLLATQNLPPNQKPLDGALMNNMVPALMKGMLADEQLLKMQNNGDSEKITRPSPSNSVVPQHDRMKTEPDMETDDSPSNVILKIPSFKPTTSSKNGCDGIRTQVEHTGSIMSPPVTSESGSPPILPPKGLIIKDVKDVIAQSISQKFQQSMEPRRPIIDMDFKRGGFTPPLGTGISVIKTQQDLNRQFQQHHQQQSSKPQHSTNSTPTGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDPKPNPVDEKIASLKQNDIRNSQEKMKSVMKPQKFSPTSPNGMKLPLFEPGMAPLAGYSGAPFPFWPHPGFTPIPLDYARNPTSFPGHNPEFFASQMMQKLQEDASRSVPPQSAGSGPTLSKNARQRAESLLESTAANGSFLDGIIRSSLESGVPCSEEKSRNEDNNVAPENMSNKALLDQLCRNSRLTPLSKPPTSEGNHSSEDESCRKSTSPLNFATGETSQDDIDDDSSSRFDKDSSEVHTIELSNDSNTSSEKRVHEEERKHPRIFLKQDLVKPENLKPEMLVRFREVLPVMDHNGVAESAPSSASENDGPQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00436386;
- 90% Identity
- -
- 80% Identity
- -