Avir003005.1
Basic Information
- Insect
- Altica viridicyanea
- Gene Symbol
- Jarid2
- Assembly
- None
- Location
- GWHAMMQ00001409:104838-113553[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9 4.7e+03 -2.0 0.0 33 55 1226 1249 1198 1267 0.75 2 2 5.8e-22 1.5e-18 67.0 0.0 6 89 1600 1681 1596 1681 0.93
Sequence Information
- Coding Sequence
- ATGAAAACTAAACGAAAGAGGAAAAATGCCTGCCCTTCTCCATTACTTGATGATAGTCCTAAAAGAACTAAAGTACATGCCCAAAGAAAGTTTGCACAAGGTTCTAACGTAAATAGCCCAGTAATAACACCTATAAGAGAACTAGAAAGTGAAAGTCCACAAACTGATGTATTACCAGAACCGGTTGAATTGTTACCGATAAAACGACCGAACACAGAAGATTTTCTAACATTTTTGTGCTTCCGAGGCACCCCGATTTTACCACCAAGTTTAAATTTCTTCAATACAGCTTCTATAGTTGATACAAACGGTCAAGTACATGAAATTAAAAGCGAAGCATCACCGAAAAATGGTCCTATCGATATAGCAAAATGCGGTTCATCTTCGGAAAAACCATTTGTTGCTTTTGGTGTTCGAAAAAGAGCCGATCCAATTGTTATTAGTCGACAAATGGATAGAAAAAGACGACACGCATTAGCATTACAAGCTTTACGTCGTAAATATCAAGAACAAAAAATGGCAAAAATACGCGCTCTAACTATAAGTAAACTCTCAGAAAAAATTACAAATAAAACGTTGGTTAAAACTAATACAGTATCAAAAACAGAAACAATAACTAAGAAAACTAACGTAAATACTTTACAAAAAACCAAAGTGGTTGCTACGAAACATATAAAAGTAACAACGAGGACCTTAAAAACCACAATTCGTCCTAAAATGAAAATGAAGCAAAATATGTGTTTACGTAGCTTTAGAGGCAGATTTATCCAACAAGAATTACCATTTAGAAAACGTGTATTACAACAAAATACGACTTCACTAGATCGGAAATTGTCTCATACTAACAAGAATAATTATGATATCGATAATGATCCTAATAAAAATACTAATGAACCTTCGACTAGTAAATCACAACGGATTAAGAAAATTGTATCTACGCCAGCTCCAGTTGGATCCAGAATGACCAGGTCAAGCTTGATAAACAAGAAGTCTCAAATAATTCGAAAGCAAATAAAACGAATATTACTTCCGAATCCCAACAGTATTATTAAAACTAAACCAAGATCTCTTAGATTGGCTGCAACGCTTAAAAAAGGTGTGGTTTCACATAAACCAACTAAATCCACAAAATTAAAATCAAAATCTACAGAAAATCAAAAAATTGAAAATATTAAACCAAAAAAACCGTTGCCTGGTTCCCCAATGGAAACTAGAAATTTACGTCAAACATTTAAGAAAAACGTGGAATTAAATACGAGAAACGTTAATAATAGAGGTTTGAAAAAGGATTTTAAAAAGGTTACAAATGTAAAAGAATTACGAAAAACTTTAAATACTAACAAAAAACATTTAACTAGATCTGTTGATATAAAAAAAGAAATAAACTCTAGTACTAACATTAAACGGAACTTAAATGCAGCTGTAGCTGTTAAAAAAACTAATATTTCTAATATTATTCAGAAAAAAATTAATATCAATAATGATGAAAATAAAATTAAAAGATCTACCAGACACTCCGATCAAGAAAAACGAAAATCTGTGAATATGAGAAGAAGTAAAGATATTGAATATGTAGATAATGAAGAAGGAAAGAAAACTAAACAACATAAATCAGAAGACGAATCTATAACACCCAAAGTAAAAAAATCTAAAGATAAAGATGCTAAAAATAATGAAGAACTTGTAATAAAGAAAAAGAAAAATAAAGATAAACAAATTATAATAGAAGATTCGGATAATAATGATACTACTACTGATAAAAAAATTGATTCTGATGTAATAATTATAAAAGATGATAGTGATAATCAAGAAGAAGTAATTAAATGCGATATAAATATTTCAGAAATACTAAAGCAGCCAAAAAGTGTAATTGAAGAAATAGAAAAAATAAAGCAACTTACATCTAAACTTGAACCAACTGAAGAAATACCAAAAAAATCGAAATCTCAAGATGAGGAAGTAATAAAAGAGCCTAAAGGAAAAATTAATGAAAAATTGATAGAGGAATTAACAATTGCCGAATTATTAAAATCTGAATACAAATTAAAACCACTTAAAACAAAAATCGAAGAAACACCAAAATTACCTAAACCCAAAATTGATGATGAAACATTAAAGCAATCTAAAGAAATAGATTTAATCAAAAACGATTCGGAAAACATTGATTCTAATAAAAACGAAAATGATGCAGTAGAAATAAAAGTAAAAGATAAAGAACAGAAAATAATTTCAAAAAAATCAACTCCATACATCAAAGAATCTGATTTTAAAGAAACAGTTAATGAAAACGAAAGTTTAACCAACAAACCAAAATCAACAGTTATTATCCCAGAATCTGAATTTAATGAAACAGTTGATCAAGAAAATGAAAATGCACCTAAAAAAATCGAGCCAAAATCTAAAAAATCACCTGAAAATGAAATTAAAGAATTATCCACTGATATAAATGAAGTAATACCCAAAAAAATCAGTTCAAAACCTAAAAAATTACCGGAATCCGAAATCGAAGTATCACACAGTGAAGAAGATGAAATTTTACCCAAAAAAATCAGTTGCAAACCTAAAATATCAAATATCTCCATTCAAAAATCCGAGATTAAAGAAAAACTCAATGAAACCGAAGCTTCAACTAAAAATGATGAAATTTCATTAAAAAAAATCGCTTCTAAACCTAAACAATCAACTGTACACAGCGAGGAATCTGAATCAAATAAAAACGACAAAATAATCACTTCAAAATCTAAGAAATCAATAGATGAATCTGAAATTAAAGAAACTGAAAATGAAGCTTTATCGAAAAAAAGACCCAAAAAAACAATTCAAGAAATCGACTCTTTACCAAAAAAACTAGCTTCTAAATCTAAAAAAATAAATCTAGAAATTGAGGATACGAGTGAAGATGAATCTCCAAAAAGGATTTCTATAAAAAGTAAACGTTATGATGACAAAGAAGAAAATCTAATACGAAACCAAAGACCTTCAAGAAAAACCAAAGAAGCTGCTGCTATTTACATGGAAATTCTAAGTCACAAACTTGTAAATGATGATAAAAGTGATGAAGATGATAATATTTCAATAGATAGTTTTCCTGAATTACCAAATGTAAAACGGACAGAACAAAGAGAAAATGAATTAAAAGCTAAAATTAAAAAATCAGCGGATAAAAAAGTTAATACAACAAAAAGATTAACAAGGCATTCATTAAATACAAAAATTTCCGATGATGATCCAGATTCTGATGAAACATTTCATATTGATATTAAAGTACCACGAAAAAAGAAAAATACACGAAGTCGAGTATCGAAAAATATAAAAACAAAATTATTATCATCAAGTGAATCCGATCATTCGACTACTTCTGTCAAGGTAAAAAAGAAATTAAGTAAAATAAAATCGATAAAACTTGATAAAGATTCAGATGATGATGATGATGATGAACCATTATCGCAACGTATAGAAAAATCAATTAAATCTAAATCTTCAGAACCACCAGCACTTAAACCGAAAAGAGAATGTGCTAAATTACCACAAAATTACCTACCAATGTTCTCATCATCGGATGAAGATGAAATATTTCATGGGTTTGATAAAAAAAATTCTACTACTGTTACTACTACTCCTATTACAACAGAGAATAAAGCTAAAATAGATGTAGAGTGTAAACATGTACCACCTCTATTAGATCTACTTAAGGAAAATAGAAGATTTGGTGGTAAAGAAAAAGTAAATATGTCTAATGAACAAATAGAAAAATGGTTAAAAGATGCAGCATTAGCTGGAAGTGGTATTAAAAAAGAAAATGATGAAATGTTGAAATTTGGTGAACGAATACCAACAGAAACAACATTGGACTTATCAGAAAATATCGATACTGAAAAACTTAAACAATCTCTTTTAGGGGTTGATAATAAAATTGAAGAAAATAAAGACTTGACACCAGCTCCTGTTAAAAATAATCCTGTGAGTAGTAGTAAAGAAGAAAAACCGCAGATTGATAGAAAATTGATTTTTCGTAAAAGTAAGATTGAAAAAACACCACCAAGGACAAAAGTTGATGCCTTTTCACCGGAAAATGAATGTAGTGTTTATGCTTTCGGTGAAGAAAATGAGGAAATTATTAATACTCCATTTAGGAGACCATCTCGGAGGCCTTCGAGTACTGCTACTTCGAAATCTGAAGATGAATCGATTAAACAAGATGAATTATTGAGAACTGGTCAATTTCGTAAACCAACATTAAAACTCGACACCTCGAAGGGAATGATTATTAAAGACGAAACTGAATCAACACCAGAAATTGAAGACAGTAAACAATTTTACGTACCACAAAAACCAACAACCAAATGCTCTCTATTCAAACCCCAACAAAAAACTTTATTAGTTAAATCAAAAAGCTCCGAAAAACTTCATGATACCGACGATTTTAAATACAAAATCCCAAGTTCCCCCAGCGCTAGTTCCTCATCAAGCGCTAAATTATATAAACGTCAAACGCAAAAACAAAAAACCAGATCAACTGATTTTTTGACTCCAGTTTATGTATCTGATTTTCCGAAAATTAACGATCCACCGAAATTGGTTGAGGCTCCCGTTTTCCACCCAACTGATCAAGAATTTCAAGATCCTTTGGAATATATTGAAAGAATTCGACATAAAGCTGAGCAGTTTGGAATTTGTCGAATTGTCCCACCAAATTCATTTAAACCAGAATGTAAAGTAACTGATGATATGAGATTTACTTCGTATAATCAGTATGTGAATAAAATGCTATATAGATGGGGACCTAATTTTAAGGAATTAATGGCTATTAAGAAGTATTTGGCAACTCAGAATATTAGTTTAAGTCATCCACCTTGGATTGGTGGTATGGAAATTGACTTACCTCGACTCTATCAAACTGTACAAACTTTGGGAGGATTAAAAGAAGTCATAGAGAAAAAGAAGTGGCCCAAAGTATCAGAATTGATGAAAATTCCTAAATCTGCACAAGATCGTGTTACTAAACTGGATGATATTTACTGTAAATATTTATTACCCTACGATACTCTTTCTCCAGCGGAAAGGGAGAAGTTATTTGATGAAGTAGAGACGGAATGGGCGAAAAAAGAATCGAGAACATTAATGAAAGCAAGCGAAGAAGGAAAAGAAAGTACAAATGAAGGAGATTCTGATATTGATGATAATGATTCAGAGGAATGTATTACAAAAGGTCGTAATATGGCTTTAAATGCATTTTATCGAATAGCTAGGAATACTATGACTATGCATTTTAAAACAAATGAACCTTTACCACATGAGGTTGAGCAAGAATACTGGAAACATGTTACGTTAAGACAAAATCATATTTGTGTACATTCTGGATCAATAGATTGTGGAAATTGGGGATATGGTTTCGCTATAGCTAAAAACAGTCCATTTGGTAAACATCCATGGAATCTCAAAGTTTTAACTAATAATAGTGGATCAGTTCTTCGATCACTTGGACCAGTGATGGGAGTAACAGTACCAACTCTTCACGTGGGAATGGTATTCAGTGCATGTTGTTGGTATCGAGACCCTCATGGTCTTCCTTGGATCGAATATCTTCACACTGGAGGTAGTAAAATTTGGTATGGTATCCCCAACTCCATGAGTGAACAATTCCATACGTCACTAAAACATTTAGTACCAAATTATTGTAAAAGTAACGAATTATGGTTACAATCAGATACCGTAATGGTTCCTCCAGCTCTTCTCATTGAAAATAATGTATCTTTATGTCATACAGTACAAGAACCTGGTCAGTTTATCGTAGTTTTTCCAAAAGCATTTACTTCTAGTATTAGTACCGGTTACGTCGTATCTGAAAGTGTGTATTTTGCTCCAATTTATTGGTTAAAAACTGCTAGAGCTCTATTTGATGCTTTAAAAGGTAGTAATGAATCTGCAATGTTTTCTTTAGATCGTTTATTGGTGAATGTTGTAAATGATATCAAATGTAATGCTGAAATTCTACGTCAAACTTTACCGCTTATACAAGAATTATGTAGTGGTGAAATGGAAAAAAGAGAGAAATTAAAGACATTTGGTGAGATTGTAAAAGAAAAATTACCAATACCAGAAGTAAGTAAAGGTAAGAAAAAGTTTCAACAAGGAGAAGAGGGTGATTATGAATGCGAATTATGCAGAAGTAGTCTATATTTATCAATGGTTTTCGATACGGTGGAAGGAATAACTTACTGTTTAGATCATGCCATTGGATTGATTGAGAAAAAAGAACTGGAATTAGGTAATTGTAAATTTATGTTTACTTACGATGACAATGAGATTCAGTCATTTCCTGATAAAATTAAATTATCTTTAGAAAATAGATTACAAAAAAAGGTTGTGAATAAATTCACTGGTATGCCAACACTTCTAGGCAAACATATTTAA
- Protein Sequence
- MKTKRKRKNACPSPLLDDSPKRTKVHAQRKFAQGSNVNSPVITPIRELESESPQTDVLPEPVELLPIKRPNTEDFLTFLCFRGTPILPPSLNFFNTASIVDTNGQVHEIKSEASPKNGPIDIAKCGSSSEKPFVAFGVRKRADPIVISRQMDRKRRHALALQALRRKYQEQKMAKIRALTISKLSEKITNKTLVKTNTVSKTETITKKTNVNTLQKTKVVATKHIKVTTRTLKTTIRPKMKMKQNMCLRSFRGRFIQQELPFRKRVLQQNTTSLDRKLSHTNKNNYDIDNDPNKNTNEPSTSKSQRIKKIVSTPAPVGSRMTRSSLINKKSQIIRKQIKRILLPNPNSIIKTKPRSLRLAATLKKGVVSHKPTKSTKLKSKSTENQKIENIKPKKPLPGSPMETRNLRQTFKKNVELNTRNVNNRGLKKDFKKVTNVKELRKTLNTNKKHLTRSVDIKKEINSSTNIKRNLNAAVAVKKTNISNIIQKKININNDENKIKRSTRHSDQEKRKSVNMRRSKDIEYVDNEEGKKTKQHKSEDESITPKVKKSKDKDAKNNEELVIKKKKNKDKQIIIEDSDNNDTTTDKKIDSDVIIIKDDSDNQEEVIKCDINISEILKQPKSVIEEIEKIKQLTSKLEPTEEIPKKSKSQDEEVIKEPKGKINEKLIEELTIAELLKSEYKLKPLKTKIEETPKLPKPKIDDETLKQSKEIDLIKNDSENIDSNKNENDAVEIKVKDKEQKIISKKSTPYIKESDFKETVNENESLTNKPKSTVIIPESEFNETVDQENENAPKKIEPKSKKSPENEIKELSTDINEVIPKKISSKPKKLPESEIEVSHSEEDEILPKKISCKPKISNISIQKSEIKEKLNETEASTKNDEISLKKIASKPKQSTVHSEESESNKNDKIITSKSKKSIDESEIKETENEALSKKRPKKTIQEIDSLPKKLASKSKKINLEIEDTSEDESPKRISIKSKRYDDKEENLIRNQRPSRKTKEAAAIYMEILSHKLVNDDKSDEDDNISIDSFPELPNVKRTEQRENELKAKIKKSADKKVNTTKRLTRHSLNTKISDDDPDSDETFHIDIKVPRKKKNTRSRVSKNIKTKLLSSSESDHSTTSVKVKKKLSKIKSIKLDKDSDDDDDDEPLSQRIEKSIKSKSSEPPALKPKRECAKLPQNYLPMFSSSDEDEIFHGFDKKNSTTVTTTPITTENKAKIDVECKHVPPLLDLLKENRRFGGKEKVNMSNEQIEKWLKDAALAGSGIKKENDEMLKFGERIPTETTLDLSENIDTEKLKQSLLGVDNKIEENKDLTPAPVKNNPVSSSKEEKPQIDRKLIFRKSKIEKTPPRTKVDAFSPENECSVYAFGEENEEIINTPFRRPSRRPSSTATSKSEDESIKQDELLRTGQFRKPTLKLDTSKGMIIKDETESTPEIEDSKQFYVPQKPTTKCSLFKPQQKTLLVKSKSSEKLHDTDDFKYKIPSSPSASSSSSAKLYKRQTQKQKTRSTDFLTPVYVSDFPKINDPPKLVEAPVFHPTDQEFQDPLEYIERIRHKAEQFGICRIVPPNSFKPECKVTDDMRFTSYNQYVNKMLYRWGPNFKELMAIKKYLATQNISLSHPPWIGGMEIDLPRLYQTVQTLGGLKEVIEKKKWPKVSELMKIPKSAQDRVTKLDDIYCKYLLPYDTLSPAEREKLFDEVETEWAKKESRTLMKASEEGKESTNEGDSDIDDNDSEECITKGRNMALNAFYRIARNTMTMHFKTNEPLPHEVEQEYWKHVTLRQNHICVHSGSIDCGNWGYGFAIAKNSPFGKHPWNLKVLTNNSGSVLRSLGPVMGVTVPTLHVGMVFSACCWYRDPHGLPWIEYLHTGGSKIWYGIPNSMSEQFHTSLKHLVPNYCKSNELWLQSDTVMVPPALLIENNVSLCHTVQEPGQFIVVFPKAFTSSISTGYVVSESVYFAPIYWLKTARALFDALKGSNESAMFSLDRLLVNVVNDIKCNAEILRQTLPLIQELCSGEMEKREKLKTFGEIVKEKLPIPEVSKGKKKFQQGEEGDYECELCRSSLYLSMVFDTVEGITYCLDHAIGLIEKKELELGNCKFMFTYDDNEIQSFPDKIKLSLENRLQKKVVNKFTGMPTLLGKHI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -