Avir007220.1
Basic Information
- Insect
- Altica viridicyanea
- Gene Symbol
- Arid5a
- Assembly
- None
- Location
- GWHAMMQ00000255:737348-742911[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.1 1.5e+04 -3.6 0.0 34 46 11 23 9 27 0.79 2 3 1.9e-25 4.9e-22 78.1 0.0 1 89 100 186 100 186 0.94 3 3 3.6 9.1e+03 -2.9 0.0 29 48 437 456 423 480 0.75
Sequence Information
- Coding Sequence
- ATGAAACGTCTAGATGGAGTAGAAGATATTTACTTAAAGTATAAAATTGTAAATGCCTTAGGTGGCTTCTACGTTTTATATCCCAACACTAGGTTAGAAGGTCATGAATTACTTTGTAATCATCTAGCGCCCAAATTGAAAGGTAGGCCTAGAGGAAAACGGAAAAAGCGTAGTGTTTCACCAGGATCTGAGAGTAATGAGTCTGAAGAATCTTCTATTATTAGTACGGATCATACCATACAATTAGGTTCCTCTGGAAGTGGACCTCGGCGGAGTACACGTTGTCATGAAAATAATGAAAACAAAGAGTTTGTAAAAAAACTTGGTGCTTTTATGAGATCCAGACGTACCACCATAGGTAGAATCCCTTCATTAGGATACAAAGAATTGAATCTTCATGAATTTTTTACAAGAGTACAAAAATTAGGTGGATATGACTGTGTGACAACTAATCGCCTATGGAAATCTATATTCGATGAAATGAGCGGACATCAAAATAGTACAAGTGCAGCTACGGTTATACGAAGACATTACGAAAGGTTCTTATTACCATATGAACGTCACATACGTGGAGAAGAATATAAACCTTTACCCATATCAGAGAGGAGAAGATTGAAATTTAAAAGAGGTAGCAGTAGTGTAAGTGATGCAGAGTCCAGTAACGATAGTACTTCGATTCCATCTACATCAAGGAAACTTTCTGTAACTGAAGTTTTGACTGAAAACAAGGATGTTGTGAAATCTGAAGGAAAAACATCATCACTACGAAGTGTTCGCGTAAAACCTGACAGACAAAAGGACAAACAACTCCAAAACGATAAAGAAACAACTCCAAACAACCACAACACCATAAATAACAACAACAATGAAAATTGGCAGCCGTCGCTTCAATCGGATGATAAAGTTGATGTGAAAGTGGAAAACATCGTGTACAAAACCGAAAGTATGACTGTAAAAACCGAACTTTCTACGGTAATAACTCAAACCCATCCCGTTAAAATAGATTATGCAACAGTGAAAAGTGACAATGAAGATATTAAAATCGAAACTAACCTTAAAACCGAAACTAAAGTTGAAGAAAATCCTGTAATCAATGTAGTTAATACACCAGTGCCTGTTAAAATAAAACAGGAAAGTGATGATAAAAATATCGAAATAATTCCTGTGAAATTCGAACCGGTAACATCAGCAGCAACGCCAAAAGTACCAGTGAGTGAAGCATTATCACCGGTAGAGGGCAAAGAAAATATACCACTCATTAAAACAACAGAAAATAATCTTGAAATTACTCAAGTATCAAACAGACCTACTGAAATTGATACTTATCATAGAAATAATAATATATTAAAAGAAGGTGGACTTGAGGTTACTCCTGTAAGATCAACTCCAAAAGATGATCGACCATCAGTGATACAACATATTACACCACCACCAGTTCAATTAATACCAAAATCCTTAAAAACAGAAACAATGCCGCCACCTACAAGTGTAATACCGTTAAAAAGAACTACAAGTTCGGCACCTCAAAATATAAATCCGTCAACACCAACTAAAAAACCTTCTTCCTCCTCCTCCAGTTCGTTTTTTGTTACTAATGGTACTACTCCTCCTAAAGTTGTACAATCGAAATCTATTTATAGTTATTCGGAAAAAACTGTTTATGGCAATCCAAAAGATATTTTATCACCTATAGTACATACACCGAGATTTATCGATAATCCTCCTACACGAGGAGGTGATCCTGTTGATTTATCTGTTAATAGTCCACAAAAACCAATTATCGAAATTATGAGAATGCCTCAATCCTCAGCATCGAGTTCTGTTTTTAATCGTGATAGTGTAACGAAAAATTTATATAAAACAACAAATTCCTCAGCAATAGATGGTCGAATGTTAAGTCCAAATTTAGAAATAACTTTAGTTGGTCCCAGTAATAATAAAAATAAAAATAGTAATATACAAAAAATTTACAATTATCCTCAACAACCTGTGTCGTCATCACAACACCACCATCACCAATTCCAACAACAAAAACGAGTTTCGACAGATTATTATTCATCTTCTTCTAAATTAACAAAAGCAGGAGAAAATGGACGTCAAAAAGCAAATGGTGCTTCACATTCTAACACTAAACAAAATGTCGATATTAATTTATTAATGAAATCAAGATCAGCAAAAGCAACATCAAGTAGTGGTGGTAGACTACAACAAAATGTCAAAAATTTTCAAACACCTCAAGCGGCATTTCCACCTTATCTTACTCAATTGTACGAGCAAGCTAGTAAAAATGTACCTCCTTATTTGCCTTTTGTAGATCCTACAATGTATTACACTGCCGCTATGCAGAATTTATATTCAAATAACGCCCTAAATTCTGCACCGATTTTACCAATGCCAACACAGGAACAGCTCAAATTATATGCCGAATTGATGGCACATGGCAGAGTACCGTATCCGTTTCAAATGCCACAGGATGGTAATAATAAAACGAAAAAGCCTTAA
- Protein Sequence
- MKRLDGVEDIYLKYKIVNALGGFYVLYPNTRLEGHELLCNHLAPKLKGRPRGKRKKRSVSPGSESNESEESSIISTDHTIQLGSSGSGPRRSTRCHENNENKEFVKKLGAFMRSRRTTIGRIPSLGYKELNLHEFFTRVQKLGGYDCVTTNRLWKSIFDEMSGHQNSTSAATVIRRHYERFLLPYERHIRGEEYKPLPISERRRLKFKRGSSSVSDAESSNDSTSIPSTSRKLSVTEVLTENKDVVKSEGKTSSLRSVRVKPDRQKDKQLQNDKETTPNNHNTINNNNNENWQPSLQSDDKVDVKVENIVYKTESMTVKTELSTVITQTHPVKIDYATVKSDNEDIKIETNLKTETKVEENPVINVVNTPVPVKIKQESDDKNIEIIPVKFEPVTSAATPKVPVSEALSPVEGKENIPLIKTTENNLEITQVSNRPTEIDTYHRNNNILKEGGLEVTPVRSTPKDDRPSVIQHITPPPVQLIPKSLKTETMPPPTSVIPLKRTTSSAPQNINPSTPTKKPSSSSSSSFFVTNGTTPPKVVQSKSIYSYSEKTVYGNPKDILSPIVHTPRFIDNPPTRGGDPVDLSVNSPQKPIIEIMRMPQSSASSSVFNRDSVTKNLYKTTNSSAIDGRMLSPNLEITLVGPSNNKNKNSNIQKIYNYPQQPVSSSQHHHHQFQQQKRVSTDYYSSSSKLTKAGENGRQKANGASHSNTKQNVDINLLMKSRSAKATSSSGGRLQQNVKNFQTPQAAFPPYLTQLYEQASKNVPPYLPFVDPTMYYTAAMQNLYSNNALNSAPILPMPTQEQLKLYAELMAHGRVPYPFQMPQDGNNKTKKP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -