Avir001575.1
Basic Information
- Insect
- Altica viridicyanea
- Gene Symbol
- Tef
- Assembly
- None
- Location
- GWHAMMQ00001194:81380-87712[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.5e-12 4.7e-09 36.1 9.2 1 62 126 187 126 189 0.97
Sequence Information
- Coding Sequence
- ATGGATTTTCACCTTAGATTTACAGAAGGTTCGGAAGAAAACGTATTTTTTCCTGTATCTGCGTTTTCAACGTATAGTCACTTCAAGAATGGTACTCCGATACTTCCATCACAGTCGCAAGATACCGATATCAAATATTTTTTAAATCCAGAATTACATTTGAGATATACATCAGGAAAAAATGATGAAAAAATATTTCTTCACCAAAAAAAGGGATTACCGAAATCGTCAATTTTTCCTTATTCACCATCGATAAATTTCATATCGGACCAAATACGAAGTAGATCATCGCCAGATATATGTCAATTTTCGTTATTTGATGCGGCAAATTTGCGTCGGCAAAGAGGAGAAAAGAAACCAATTCCGGATGAACAAAAAGATGATAGATATTATGAAAGGAGACGAAGGAATAATCAAGCTGCAAAAAAATCCAGAGATGCTAGGAAATTTAGAGAGGATCAGATTGCTCTAAGAGCAACGATATTGGAACATGAAAATGCAATATTAAGAGCACAGCTTCTTACATTAAGAGAAGAAGCTTCTTCACTACGACAAATGCTGGTTCAGAAGAAATCGATTGAAATTGTTTCTAGAGATTCTCATCTAAGTATTTCATAA
- Protein Sequence
- MDFHLRFTEGSEENVFFPVSAFSTYSHFKNGTPILPSQSQDTDIKYFLNPELHLRYTSGKNDEKIFLHQKKGLPKSSIFPYSPSINFISDQIRSRSSPDICQFSLFDAANLRRQRGEKKPIPDEQKDDRYYERRRRNNQAAKKSRDARKFREDQIALRATILEHENAILRAQLLTLREEASSLRQMLVQKKSIEIVSRDSHLSIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00056303;
- 90% Identity
- iTF_00056303;
- 80% Identity
- -