Basic Information

Insect: Alsophila aescularia
Gene Symbol: stc_1
Assembly: GCA_946251895.1
Location: CAMIUG010001090.1:146187-176558[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 2 3.6e+04 -4.2 1.6 15 19 579 583 578 583 0.81

2 15 0.06 1.1e+03 0.8 1.7 2 10 611 619 611 619 0.92

3 15 3.3e-05 0.6 11.2 18.1 4 19 627 642 625 642 0.93

4 15 4e-06 0.072 14.1 10.0 1 19 678 696 678 696 0.97

5 15 1.7 3e+04 -3.8 0.5 8 11 701 704 701 704 0.87

6 15 0.021 3.7e+02 2.2 19.9 1 18 737 754 737 755 0.99

7 15 2.2e-05 0.39 11.7 11.8 1 19 796 818 796 818 0.87

8 15 2 3.6e+04 -5.2 2.2 6 10 848 852 848 852 0.94

9 15 0.014 2.4e+02 2.8 7.3 1 11 858 868 858 869 0.93

10 15 0.074 1.3e+03 0.5 0.7 3 10 872 879 871 879 0.90

11 15 4.8e-08 0.00085 20.3 14.5 1 19 885 903 885 903 0.99

12 15 0.69 1.2e+04 -2.6 15.7 1 18 942 958 942 959 0.87

13 15 2e-07 0.0035 18.3 13.9 1 17 995 1013 995 1019 0.85

14 15 0.0081 1.4e+02 3.5 11.9 1 14 1025 1037 1025 1051 0.85

15 15 0.27 4.8e+03 -1.3 0.4 7 12 1066 1071 1060 1071 0.82

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	2	3.6e+04	-4.2	1.6	15	19	579	583	578	583	0.81
2	15	0.06	1.1e+03	0.8	1.7	2	10	611	619	611	619	0.92
3	15	3.3e-05	0.6	11.2	18.1	4	19	627	642	625	642	0.93
4	15	4e-06	0.072	14.1	10.0	1	19	678	696	678	696	0.97
5	15	1.7	3e+04	-3.8	0.5	8	11	701	704	701	704	0.87
6	15	0.021	3.7e+02	2.2	19.9	1	18	737	754	737	755	0.99
7	15	2.2e-05	0.39	11.7	11.8	1	19	796	818	796	818	0.87
8	15	2	3.6e+04	-5.2	2.2	6	10	848	852	848	852	0.94
9	15	0.014	2.4e+02	2.8	7.3	1	11	858	868	858	869	0.93
10	15	0.074	1.3e+03	0.5	0.7	3	10	872	879	871	879	0.90
11	15	4.8e-08	0.00085	20.3	14.5	1	19	885	903	885	903	0.99
12	15	0.69	1.2e+04	-2.6	15.7	1	18	942	958	942	959	0.87
13	15	2e-07	0.0035	18.3	13.9	1	17	995	1013	995	1019	0.85
14	15	0.0081	1.4e+02	3.5	11.9	1	14	1025	1037	1025	1051	0.85
15	15	0.27	4.8e+03	-1.3	0.4	7	12	1066	1071	1060	1071	0.82

Sequence Information

Coding Sequence: ATGTCTCAGTGGAACAACTCGTACGCTTATAACAACCAGTACCAAGGCCCCAATACCTGGAATGGTGTCACAAACGGTCAGTACATGAACCAGGCTTATTATGGTAGACCAGAAGCAGGAAACCAGTATGTGAGCTTCAATGAGTTCCTTAGCCAGATGCAGACCAGCAACCCCGCAGCAGGTAACACTGCTAACTATAACAGTGCACTGTATGAAAGTTACCCTAGCAGGCAGTATAATTACCAGAATATGGCATCAACTTCCCAAACCCAGCCGAACAGTTACAACTATGCATCAGTGCCCACAAACATGCCCAATGAAGCAAACACCTATCAGCTAAATGTGCAAAGCCTGTACAATCCCCAGCCAGATCCAAATTCATACACAAGTGAGATGATTTTAAATTCTAACCTTACACCAACAGCAACAGAATTTGTGCCAAAAAGTTGTACTTCTCAGTCTTCAACCAGCATTCAGAACATTCCAGAAGCAACTAACAGTCCAAATGCTGCAAATGAGCCTCAAACTAGCTATCAGAAAAAAACTGGGGGCAGTTCATCAGATAAAAACTGGAGAGAACGGCCACAAAGCTCACAACCCAGTGAAGCAAAAGAAAAGACTGTTTTAAATGGATATTCACAGGAAAATGGTAAATGCTACGGAAGCAATACCCGGAACCGTGATACATATTGTAATAATGATTCAAATGGTCGTCTTAGTGAGAATAATACAAATGAAAATACAAGTAATCGAGATTATGAATCTGCCCGTCAGAGCCGAGAGTCTAAAAGTGACAATAATGAGCCTACCTGTTCCAATAATGAACCTAGGAGTGAACCTAGTAGCAGCTTTAATGAACCAATCAATCGCAGTAACAAATCTAGCAGTCGTTATAAGGAACATAACAGTCGCAACAATGAACCTAACAATCGCTACAATGAACCTAGCAATCGCAACAATGAACCTAGTAATCATAACCATGAACCCAGAAGCCGTAACTATGAAAACCGAGGCCGAAACTATGAATCCAGCAGTCGTAATTATGACTCTACCAGCCGAAAATACGAATCCAATAGTCAAAACCAAGATCCTAACAGTCGCAATTATGATAATACTACTCGTAACCCAAATAGGAACTACGAATCGAATAATCGCAATCAAGAATTTACTAGAAACCAAGACAACAGGGATCCAACCAACAGGAATCAAGATTCAAACCCTCGCAATTACGAGTCGAACTACCGTAATGAACGAAGAAACCAGTCGAAAGGAAACTCAAAATTTAAGGGTAAGGATGCCGAGAACCGGACTTTCTATAACAGTTCAATGGCAAAAGATGATGCAAGAGGTGGAAGGGGCGAAGTTAGAAATAGAAACTGGGTCGGTAGTCAGAGACTGCGAGGTTCTGAACGTAACAATGTAGAAGATGAACAGTACGCTAGCAGCTATACGCAGAAAGAAGAGCGGACAGAAAAAGAAAGAGCTCCAAGAGTACAGAATGTTGCAAGTCCTGTCAGATTTAGAAATAAACAAGGGGACCAAGTTAACAAAGAAATGACCCAGCGAGAGCGGCTGGCTGAGCAACTAGACAAAGGTGCACTGGAGTGTCTCGTGTGCTGCGATAGAGTGAAGCAGATGGATCCCGTGTGGTCGTGCAGCAACTGCTACCATGTGTTACATCTGCGCTGTATACGGAAGTGGGCCATGAGCAGTATGGTTGAGGGTAGATGGCGCTGCCCTGCGTGCCAGAACTCGAACGACGCGATCCCGACCGAGTACCGCTGCATGTGCGGCGCCGTGCGCGCGCCGGAGTACAACCGCGGCGCGGGAGGCGCGCACACGTGCGGCAAGTCGTGCCGGCGGCCGCGCACTTGCCCGCACCCGTGCACGCTGCTGTGCCATCCGGGGCCGTGCCCGCCCTGCCAAGCCACCGTCACCAAACAATGCGGATGCGGCGCGGAGACGCGCTCAGTGCTGTGCAGCAGTAAGTTGCCGCAAGTGTGCGGGCGCGCGTGCGGCCGCAGCCTCGCGTGCGGCGCGCACGCGTGCGCGAGGGAGTGCCACGAGGACCCCTGTGACTCCTGCACCGAGACTGTAGTACAAGTGTGCCACTGCCCGGCGGCGGTCTCGCGCACGGTTCCATGCACGGCCGAGTCTGGCGCCACGGAGCGCTGGTCGTGCTCAGGCGAGTGCGGCCGCGTGCTGACGTGCGGCGCGCACGTCTGCCACGCGCCGTGTCACGCGCCGCCGTGCGCGCCGTGCTGCCTGCTGCCCGCCGCCGTGCTCACCTGCCCTTGCGGGAAGATGAAACTGCAGCCGGCGAGCCGCACGTCGTGCACGGCGCCCATCCCGCTGTGCGGCAACATCTGCGCACGCGCGCTGCCTTGCGGGCCCGCGGGGGACAAGCATTTCTGCAAGCTGGACTGCCACGAAGGTCCGTGCCCGGCGTGCCCCGACAAGACCCTGGTGCAGTGCCGCTGCGGACACTCGAGCCGTGAAGTGCCGTGCGCCGACCTGCCTGAGATGTTGAACAACGTGCTGTGCCAGAAGAAGTGCAATAAGAAGCTGTCGTGCGGCCGGCACCGCTGCCGCACGGCGTGCTGCGCCGCCAGTTCGCACCGCTGTGCCGTGACGTGCGGCCGCTCGCTGGCGTGCGGCACGCACCGCTGCGAGGACTTCTGCCACACGGGACACTGCGCGCCCTGCCCGCGCGTCAGCTTCTCGGAGCTGACTTGCGAGTGCGGCGCGCAGGTGCTGCACCCGCCCGTGCGCTGCGGCACGCGGCCGCCGGCGTGCTCCGCGCCGTGCCGCCGCCCGCGCGCGTGCGGCCACCCGCCGCACCACGTGTGCCACTCCGACGACTGCCCGCCGTGCGTCGTGCTCACCACCAAGCGCTGCTACGGGAACCACGAAGAGCGCAAGACAATACCGTGTTCGCAAGAGGAATTCTCGTGCGGCCTGTCGTGCGGCAAGCCGCTGCCATGCGGGAAGCACTCCTGCATCAAGACCTGCCACAAAGGGCCCTGCGACACGGGCAAATGCACCCAACCGTGTGCAGAGAAGCGTCCGTCGTGCGGGCACCCGTGCGCGGCGCCGTGCCACGCGGGTGCGGGCGAGGCGGGCGGCGCGTGCCCGTCACCCGTGCCGTGCCGCCGGGCCGTGCGCGCGCTGTGCCCGTGCGGCCGCCGCTCCGCCGAGCGCACCTGCCACGAAAACGCACGGGACTATGCCAAGATGATGAGTGCCCTCGCCGCGACAAAAATCCAAGAGGGCGGCTCCGTGGAGCTGTGCGACGTGCAGCGCCCCGGGAACATACTCAAAACGTAA
Protein Sequence: MSQWNNSYAYNNQYQGPNTWNGVTNGQYMNQAYYGRPEAGNQYVSFNEFLSQMQTSNPAAGNTANYNSALYESYPSRQYNYQNMASTSQTQPNSYNYASVPTNMPNEANTYQLNVQSLYNPQPDPNSYTSEMILNSNLTPTATEFVPKSCTSQSSTSIQNIPEATNSPNAANEPQTSYQKKTGGSSSDKNWRERPQSSQPSEAKEKTVLNGYSQENGKCYGSNTRNRDTYCNNDSNGRLSENNTNENTSNRDYESARQSRESKSDNNEPTCSNNEPRSEPSSSFNEPINRSNKSSSRYKEHNSRNNEPNNRYNEPSNRNNEPSNHNHEPRSRNYENRGRNYESSSRNYDSTSRKYESNSQNQDPNSRNYDNTTRNPNRNYESNNRNQEFTRNQDNRDPTNRNQDSNPRNYESNYRNERRNQSKGNSKFKGKDAENRTFYNSSMAKDDARGGRGEVRNRNWVGSQRLRGSERNNVEDEQYASSYTQKEERTEKERAPRVQNVASPVRFRNKQGDQVNKEMTQRERLAEQLDKGALECLVCCDRVKQMDPVWSCSNCYHVLHLRCIRKWAMSSMVEGRWRCPACQNSNDAIPTEYRCMCGAVRAPEYNRGAGGAHTCGKSCRRPRTCPHPCTLLCHPGPCPPCQATVTKQCGCGAETRSVLCSSKLPQVCGRACGRSLACGAHACARECHEDPCDSCTETVVQVCHCPAAVSRTVPCTAESGATERWSCSGECGRVLTCGAHVCHAPCHAPPCAPCCLLPAAVLTCPCGKMKLQPASRTSCTAPIPLCGNICARALPCGPAGDKHFCKLDCHEGPCPACPDKTLVQCRCGHSSREVPCADLPEMLNNVLCQKKCNKKLSCGRHRCRTACCAASSHRCAVTCGRSLACGTHRCEDFCHTGHCAPCPRVSFSELTCECGAQVLHPPVRCGTRPPACSAPCRRPRACGHPPHHVCHSDDCPPCVVLTTKRCYGNHEERKTIPCSQEEFSCGLSCGKPLPCGKHSCIKTCHKGPCDTGKCTQPCAEKRPSCGHPCAAPCHAGAGEAGGACPSPVPCRRAVRALCPCGRRSAERTCHENARDYAKMMSALAATKIQEGGSVELCDVQRPGNILKT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -