Aaes028880.1
Basic Information
- Insect
- Alsophila aescularia
- Gene Symbol
- ZEB2
- Assembly
- GCA_946251895.1
- Location
- CAMIUG010001534.1:24379-49765[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 1.4 1.4e+02 4.2 1.3 5 23 306 324 297 324 0.90 2 15 6.4 6.2e+02 2.1 6.5 1 23 332 355 332 355 0.91 3 15 2.9 2.8e+02 3.2 0.8 1 22 359 380 359 382 0.85 4 15 0.0093 0.9 11.1 2.2 1 23 458 480 458 480 0.98 5 15 0.073 7.1 8.3 7.0 1 23 488 511 488 511 0.97 6 15 0.0022 0.21 13.1 3.5 1 23 542 565 542 565 0.95 7 15 0.24 23 6.6 4.4 3 23 571 592 569 592 0.90 8 15 2.3 2.2e+02 3.6 0.1 3 23 847 868 845 868 0.85 9 15 1.4e-05 0.0014 19.9 0.7 1 23 877 899 877 899 0.98 10 15 0.00013 0.013 16.9 0.9 1 23 905 928 905 928 0.94 11 15 0.00013 0.013 16.9 0.9 1 23 955 978 955 978 0.94 12 15 0.00013 0.013 16.9 0.9 1 23 1005 1028 1005 1028 0.94 13 15 0.00022 0.021 16.2 1.1 1 23 1055 1078 1055 1078 0.94 14 15 0.00013 0.013 16.9 0.9 1 23 1105 1128 1105 1128 0.94 15 15 0.00044 0.043 15.2 0.3 1 20 1155 1174 1155 1176 0.94
Sequence Information
- Coding Sequence
- ATGTGGGATCTGATGGCGTGCACTGTGTGCTTCAGCACTGGTGTAAAACTCTATAGTCTGAACGTTGGAACGCTTAGGAAAGAGTTCAACTTGGCTTCCGGACTTCAGACTGTGCAAGGAAATGGTATGCCGGAATTTTTATGTGTGGGGTGCTCAGCATATGTGAAGAAATATAACAAGTTCCGTGAAAAGTGCCACCGAGCACACTATGCATTAGAACAAATTCTGATTAAGAATAAAGAGATCAGAAAGTCAGATCTGAAAGCATTCAGCCTTCGAACGCTACAGCTCATGCCTACCTTATCGTACATTGATTTAGACCGATATCATTATGAACAAGTTAAGTTCAAACTTGCTGGTTACTCCCGCACAAGTGTCTCTCCAGATGGCTTCATACCTGTCGCTCATTACAGCACACTCACAAAGGAAGAGACATTTGAAGACGAAATGAGAGACCTAACCAACAAAAATATTGTTTTGGAAACTGTTAAGGTTGAAGTTGACCAAACGACAAATATGATTGAAGTTGACCAAACGACAAATATGATTGAAGTTGACCAAACAACGAATATGATTGAAGTTATAGATGAATTCACACCGAAAATACCAAGCATACTTTGCAATGCTTTACAAAGCAGCAATACAACATCAACCTTTGCAACTGTGAAAGCACAGAATGACTCAAAACACCACCAATTCAATGAAGAAGACGATGATATGTTTGAAAATGATGGAAATATGGACGAAAGTGATTGTGAAGATGAAAATTTCGGACTGCTGACATGTAAATTGAACAATAAAGAAGATGGCTCTAGTTTTAACGAGGAGTACGCGAAAATTATACCTATATCTGTGAAGGAAGCGAAAGCAGCAGTGGCGGTGCATGATTACTGTTCCCTTGGGGAGTTCAAGTGTAACTGTGGAAGGAGATTCGGCACTGAGAAGGGTGCTCAGCAGCATTCACGTAGACATGATAAGCATATAAGCGGGAACTACCACTGTGAGATTTGCGATTACTACTGCAAGACTGCATTCCTCCTGCAATGTCACATGACGGACCAGCATATGTACAAATATCTGTGTAAGAAGTGCCCAGAAGTCACCTTTTCTAGGACAACAGCCAAGCAGCATTATGTATGGAAACACATACAAGAGGGTCAAAAAGAAGAAAAAATTAAATGGGCCGGCAACAGACCTACATGGCTGGGCACTAAAGGGGGCGCTCGTATCAAGGGTCAATTCTCATCAAAGCCGAAGAGAAAAATCAAAAAACCTCCTAAAGACTTCCTCATCTATACTCCAATCTCACAAGAGGAGCAGTACCTTATGATACAGCAGCGGAAGGAGTCTCGTAACTACTTGGAGGCCAAATTCAAGTGCGAACTGTGCTATAGAGGGTACAGGCTCACTTCTACGTACAACAAGCACATGGCTAAGCATAATCCTGCAATATCTGGCATTCACCAATGCGACATGTGTAAACACTACTTCCGAATTAAACGCACCCTGTACAAGCACATGATGATGTACCACCTGTTCAAATACTCGTGTCGGTTCTGCGACTTCGTCTGCACCTGCAAGGGCCAAGCGTTGTACCACTACAGGTGGCACAAGAACGTCACCTACGACTGCCCGCATTGTGATAAAAAGTTTACGAAAATCTCGACTCAGCTAACGCACATAAGGTTCAAGCATCCGTCTACGGACATATGCAACCTGTGCGGACATAGTTTCGTCAGCTCCAGCGGCCTCAACTGTCACAAGCACATGTCACACACCAAAGAGGAGATAGACATGAGCGAGGCCATGACGTTGAACCCTTCACATACAGACTTCTACTGCGGCGAGTGCAAGATCCAGTTCCTAACCGAACAAGCGTACATCACACATCTTGGCAGCTCGCGGAAGCACGTCGAGACTAATCTCTCTGTGGCGAAACAAGAGCGCGCGCACCGACGCACCGAGCGGTTAGAAGCACGGGGCCACGCCCCAACAGTCCGCGCGCCAACCCGCGGTCGCCCGCGCGCGCCCGGTGCCTCCGAGGTGCTCAACACAGGCACCACCACCGCCACCAACTGTGAAGTGGTGAGTATCTATATACAGGGCGACTCGATGCACCGAGCGGTAAACAAGCACGGAATCACGCCGCTACAATCCGCGTGCTGGCCCGCGGCCGCCCGCGTGCGCCCGGCGCCTCCGAGCGGTAAACAAGCACGGAGTCACGCTGCTACAATCCGCGTGCTGGCCCGCGGCCGCCCGCGTGCGCCCGGCGCCTCCGAGGTGCTCAACACAGGCACCACCACCGCCACCAACTGTGAAGTGGTGAGTATCTATGTACAGGGCGACTCGACACACCGAGCGGTAAACAAGCACGGAGTCACGCCGCTACAGTCCCCGTACTGGCCCGCGGCCGCCCGGCGCCTCCGAGGTGCTCAACACAGGCACCACCACTGCCACCAACTGTTAAGTGCCCGCTGCTGGCCCGCGGCCGCCCGCGCCTCCAAGGTGCTCAACACAGGCACCACCACCGCCACCAACTGTGAAGTGTGCGGCAAGTACCTGACGAGCGACGTGATGGCGCGCAAGCACTACGAGGCGGAGCACCCCGGCACCGACTACCTCAAGCGGTACATGTGCGACGTGTGCGGACACACCACCAAGCAATACGCCAATCTGCTGGTCCACATGAGGGTCCACACACAAGAGAAGCCGTACGAATGTCCACACTGCGACCGCAGGTTCAGCATGCCCAGCAACAGAGATCGACATCTTGTTGTTCAGCATGCCCAGCAACAGAGATCGACATCTTGTTGTAAGTACATATCAGTAGTACACATGAGGGTCCACACACAAGAGAAGCCGTACGAATGTCCACACTGCGACCGCAGGTTCAGCATGCCCAGCAACAGAGATCGACATCTTGTTGTTCAGCATGCCCAGCAACAGAGATCGACATCTTGTTGTAAGTACATATCAGTAGTACACATGAGGGTCCACACACAAGAGAAGACGTACGAATGTCCACACTGCGACCGCAGGTTCAGCATGCCCAGCAACAGAGATCGACATCTTGTTGTTCAGCATGCCCAGCAACAGAGACCGACATCTTGTTGTAAGCACATATCAGTAGTACACATGAGGGTCCACACACAAGAGAAGCCGTACGAATGTCCACACTGCAACCGCAGGTTCAGCATGCCCAGCAACAGAGACCGACATCTTGTTGTTCAGCATGCCCAGCAACAGAGATCGACATCTTGTTGTAAGTACATATCAGTAGTACACATGAGGGTCCACACACAAGAGAAGACGTACGAATGTCCACACTGCGACCGCAGGTTCAGCATGCCCAGCAACAGAGATCGACATCTTGTTGTTCAGCATGCCCAGCAACAGAGATCGACATCTTGTTGTAACTACATATCAGTAGTACACATGAGGGTCCACACACAAGAGAAGCCGTACGAATGTCCACACTGCAACCGCAGGTTCAGCATGCCCAGCAACAGAGACCGACATCTTGTTGTAAGCACATATCAGTAG
- Protein Sequence
- MWDLMACTVCFSTGVKLYSLNVGTLRKEFNLASGLQTVQGNGMPEFLCVGCSAYVKKYNKFREKCHRAHYALEQILIKNKEIRKSDLKAFSLRTLQLMPTLSYIDLDRYHYEQVKFKLAGYSRTSVSPDGFIPVAHYSTLTKEETFEDEMRDLTNKNIVLETVKVEVDQTTNMIEVDQTTNMIEVDQTTNMIEVIDEFTPKIPSILCNALQSSNTTSTFATVKAQNDSKHHQFNEEDDDMFENDGNMDESDCEDENFGLLTCKLNNKEDGSSFNEEYAKIIPISVKEAKAAVAVHDYCSLGEFKCNCGRRFGTEKGAQQHSRRHDKHISGNYHCEICDYYCKTAFLLQCHMTDQHMYKYLCKKCPEVTFSRTTAKQHYVWKHIQEGQKEEKIKWAGNRPTWLGTKGGARIKGQFSSKPKRKIKKPPKDFLIYTPISQEEQYLMIQQRKESRNYLEAKFKCELCYRGYRLTSTYNKHMAKHNPAISGIHQCDMCKHYFRIKRTLYKHMMMYHLFKYSCRFCDFVCTCKGQALYHYRWHKNVTYDCPHCDKKFTKISTQLTHIRFKHPSTDICNLCGHSFVSSSGLNCHKHMSHTKEEIDMSEAMTLNPSHTDFYCGECKIQFLTEQAYITHLGSSRKHVETNLSVAKQERAHRRTERLEARGHAPTVRAPTRGRPRAPGASEVLNTGTTTATNCEVVSIYIQGDSMHRAVNKHGITPLQSACWPAAARVRPAPPSGKQARSHAATIRVLARGRPRAPGASEVLNTGTTTATNCEVVSIYVQGDSTHRAVNKHGVTPLQSPYWPAAARRLRGAQHRHHHCHQLLSARCWPAAARASKVLNTGTTTATNCEVCGKYLTSDVMARKHYEAEHPGTDYLKRYMCDVCGHTTKQYANLLVHMRVHTQEKPYECPHCDRRFSMPSNRDRHLVVQHAQQQRSTSCCKYISVVHMRVHTQEKPYECPHCDRRFSMPSNRDRHLVVQHAQQQRSTSCCKYISVVHMRVHTQEKTYECPHCDRRFSMPSNRDRHLVVQHAQQQRPTSCCKHISVVHMRVHTQEKPYECPHCNRRFSMPSNRDRHLVVQHAQQQRSTSCCKYISVVHMRVHTQEKTYECPHCDRRFSMPSNRDRHLVVQHAQQQRSTSCCNYISVVHMRVHTQEKPYECPHCNRRFSMPSNRDRHLVVSTYQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -