Aaes001821.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Alsophila aescularia
Gene Symbol
-
Assembly
GCA_946251895.1
Location
CAMIUG010000070.1:1258641-1264294[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.014 1.4 10.5 1.3 3 23 38 58 36 58 0.94
2 16 6.8 6.6e+02 2.1 4.3 1 19 65 83 65 88 0.90
3 16 4.6 4.5e+02 2.6 7.5 1 23 94 117 94 117 0.95
4 16 0.0012 0.12 13.8 0.7 1 23 119 141 119 141 0.96
5 16 1.1 1.1e+02 4.6 0.6 1 23 154 176 154 176 0.90
6 16 0.079 7.7 8.2 0.0 1 23 181 203 181 203 0.97
7 16 0.0098 0.95 11.0 3.4 3 23 234 255 233 255 0.92
8 16 0.18 18 7.0 3.0 1 19 262 280 262 284 0.87
9 16 0.00055 0.053 14.9 1.0 1 23 290 313 290 313 0.96
10 16 0.059 5.7 8.5 3.2 1 23 322 345 322 345 0.97
11 16 0.009 0.88 11.1 0.3 2 23 353 376 352 376 0.95
12 16 0.041 4 9.0 0.2 3 23 384 404 384 404 0.97
13 16 0.0059 0.58 11.7 0.2 1 20 409 428 409 431 0.93
14 16 0.00045 0.044 15.2 2.2 1 23 437 459 437 459 0.98
15 16 0.00022 0.021 16.2 1.6 1 23 465 487 465 487 0.99
16 16 0.00014 0.014 16.8 0.9 1 23 493 516 493 516 0.96

Sequence Information

Coding Sequence
ATGGCTTCATTTACAGCTTCACAAGATTACCTCGCCAACGAAAGTTTACGAAAAGAGCTCGAAATTCATATACCAAAGCAAACTGCTATTGACAAAATAGGTGGCATATTCTGCCACATTTGTGCTAAAACATTTGGAAATAAAAAAGATTTTGACAGTCATTATGCCGAACATAATACGAAAGGCATTGAGTACACTTGTGTGGTATGCAAGAAGCAGTTTTTTAGCTACCCAAGCTTCCGTGGGCACTGCTACCTCAACCATGTGGTGAATAATAAATTCCTATGCACTCACTGCTGCAAAAGTTTTTGTAAGTTGTCTATTCTCAATACCCATATCTCTACAGTGCATAACTACAAATGTGCCTCCTGCGAAGAAAAATTCACATCAAGAAAAGATTTGGAAAGCCACAAAGTTATACATAAAGTAAAAAAAGGGGAGGGAAAAGATGTTCCACCGTATGATTGTTTTTCATGTGGGAAGGTTATCAAAACTGCTGATATGTGTGAGAGCCACATTGACGACCACTGTGAGGTGCTCTATCCGTGCCCTATTTGCAAAGAAGTGCAGCCGAGTAAACCGGAAGCTACAAAGCATTTGAATAAACATTTTGATGAAAATAATCCAACTGATGAAGTATCACAGATGACTCAGAGCTTAAGTGAAGACAGTTCAATAGACATCCTGGGAGGAATCCTCTGCTGCCATTGCGACACGCCGTTCCGGAACAGATCGGATTTATACTCTCATTTCATGGCAGAGCATGAGGACAAAACAATTGTCTACACTTGTAACATTTGCGGAAAACAGTATGAAAAGTATTCTTTGTTCGGAGACCACTGCTATTTGCATTTCGCTAAAGATAGATTTCAATGTGATCAATGCCACAAGCTATTTCCTCGCCTGTCATTGCTAGTCATCCATACGGAAGTGTTCCACACGGGCTGCATGTCCGACAAGCCTTACACCTGTGGGTCTTGCAGTCACGGCTTCAAGTCCCACCAGCGTCTGAGGGAGCATGTGAGGATAGTTCATGATGAATCACGTTACTACATAAAATGCAAGAAACCAGGATGCTCGGCTACATTCGAGAAGCCCCGAGATCTAATACTCCACCAGAAAAACCACAACGCTTTCCTGGACAACTGGTGCCGGCAGTGCGGCCTGCAGTTCGTATCCCTATCATCTGCCGAGAAACACCTCGATGTCCACCGTCGCAAACAATACTCTTGCCCCATCTGCAAGCGCACGTATGCCGAGCGATACCTCATGGTCAAACACCTGCCAGTGCACTTCGAGACCGTGCTCCACGTCTGCAAGATCTGCGGGAAAACATACAACGCGCGGAACCGCCTCATGATGCATCTGAAGACCCACTCCGACCTCCGCAGCTACAAGTGCACAGTCTGCAGCAAAGCATTCCTGAAACCGTTCCAGTTGAAGCAGCACCTCAACACCCATGCCGAAGAGAAACCCTTCAGATGCACTCTCTGCCCTAAGACGTTCGCAAACTATCCCAACTGGAGCAAGCATCTCACTCGCATGCACGATTACGACAAGCCGACGATCAAGCGGCTCAAACTGGCGCACGACGAAGCCGCAAAATCGAATGCGATCAAAACATCCCCGACGAAAGCCGAATCGGGCATTGAATCCGCCGGCTCCGAGATGTCAGTCGACTTGTACACCTTCGTAGAATCTGACGATAGTACACATGACGTCAAAGAGCGAGAGTTCATCCCCAACCGCAAGGATCGCATTGGAAATGGCATATTTAACACCATGTGCGATCCTATAAGCGGGGAGATGTCCTTCACCGATACTGTGAACGCCGTGATAGATAGAATAGAATATTTGGATGAAGATGACATTACAGCTAGCAAAGTTGAGATGTCTGAATTCACAGCAGTAAAACCTCATTTCAATCCGGGAAATATCATGTCCGAGCAAGTGGACGATGTGAGTGACATCAGCGCCATAGTGGAGGATATTGATGCCATGAGTGGAGAAATGGAAACTGTGAACCAAGTAGATTCAACCGCAAACAATCTTCCACAAGGCGTGAATGTTGGAACTATGCAGTATGCTAATTTGATGCCAGTGGATAATGCCGTATTCAATACTAACACAGTGCAAGCCGACCTACTCGAGATGCCCTACCATGAGCCGAGCGCCTGCCAGCCCGAGTATGGACCAGAGTTCATCAACCAGGGCGCAGGGCTCGCGTGCGACGGGGTCATCAACCTCGACGACCACATTCTGCCCCACATCGACCCTCTACTCACCTTCAAAGCCGAGGAAAACAACAAAATGTACGTCCAAGACATAAACAACTTTAATTTGAACGACTTAACCGCTCCCAACAACTGTGCTGCCCAGAATTCCTGGGAGCCTATGATAACGAAAGTATATCAACAATACGCAGAAAATAACGACGCCAACAGAATCTACATCATATACTAA
Protein Sequence
MASFTASQDYLANESLRKELEIHIPKQTAIDKIGGIFCHICAKTFGNKKDFDSHYAEHNTKGIEYTCVVCKKQFFSYPSFRGHCYLNHVVNNKFLCTHCCKSFCKLSILNTHISTVHNYKCASCEEKFTSRKDLESHKVIHKVKKGEGKDVPPYDCFSCGKVIKTADMCESHIDDHCEVLYPCPICKEVQPSKPEATKHLNKHFDENNPTDEVSQMTQSLSEDSSIDILGGILCCHCDTPFRNRSDLYSHFMAEHEDKTIVYTCNICGKQYEKYSLFGDHCYLHFAKDRFQCDQCHKLFPRLSLLVIHTEVFHTGCMSDKPYTCGSCSHGFKSHQRLREHVRIVHDESRYYIKCKKPGCSATFEKPRDLILHQKNHNAFLDNWCRQCGLQFVSLSSAEKHLDVHRRKQYSCPICKRTYAERYLMVKHLPVHFETVLHVCKICGKTYNARNRLMMHLKTHSDLRSYKCTVCSKAFLKPFQLKQHLNTHAEEKPFRCTLCPKTFANYPNWSKHLTRMHDYDKPTIKRLKLAHDEAAKSNAIKTSPTKAESGIESAGSEMSVDLYTFVESDDSTHDVKEREFIPNRKDRIGNGIFNTMCDPISGEMSFTDTVNAVIDRIEYLDEDDITASKVEMSEFTAVKPHFNPGNIMSEQVDDVSDISAIVEDIDAMSGEMETVNQVDSTANNLPQGVNVGTMQYANLMPVDNAVFNTNTVQADLLEMPYHEPSACQPEYGPEFINQGAGLACDGVINLDDHILPHIDPLLTFKAEENNKMYVQDINNFNLNDLTAPNNCAAQNSWEPMITKVYQQYAENNDANRIYIIY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-