Aaes034590.1
Basic Information
- Insect
- Alsophila aescularia
- Gene Symbol
- -
- Assembly
- GCA_946251895.1
- Location
- CAMIUG010002775.1:557630-591270[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.00011 0.011 17.1 2.0 1 23 599 621 599 621 0.99 2 20 0.074 7.2 8.2 3.8 1 23 653 675 653 675 0.98 3 20 0.0033 0.32 12.5 0.6 1 23 680 703 680 703 0.90 4 20 0.19 19 6.9 0.5 1 14 707 720 707 729 0.76 5 20 0.19 19 6.9 0.5 1 14 749 762 749 771 0.76 6 20 0.19 18 7.0 0.5 1 14 791 804 791 813 0.76 7 20 0.098 9.5 7.9 1.1 1 23 833 855 833 855 0.89 8 20 0.24 24 6.6 0.1 2 23 868 890 867 890 0.94 9 20 0.017 1.6 10.3 0.0 1 23 916 939 916 939 0.97 10 20 6.9 6.7e+02 2.0 1.2 1 12 953 964 953 984 0.70 11 20 6.9 6.7e+02 2.0 1.2 1 12 998 1009 998 1029 0.70 12 20 4.9 4.8e+02 2.5 0.1 1 11 1043 1053 1043 1056 0.84 13 20 8.9 8.7e+02 1.7 1.3 1 10 1088 1097 1088 1119 0.66 14 20 6.9 6.7e+02 2.0 1.2 1 12 1133 1144 1133 1164 0.70 15 20 4.9 4.8e+02 2.5 0.1 1 11 1178 1188 1178 1191 0.84 16 20 6.9 6.7e+02 2.0 1.2 1 12 1223 1234 1223 1254 0.70 17 20 5e-06 0.00049 21.4 0.5 1 23 1268 1290 1268 1290 0.96 18 20 0.00045 0.044 15.2 1.1 1 23 1296 1318 1296 1318 0.97 19 20 5.9e-05 0.0057 18.0 7.6 1 23 1323 1345 1323 1345 0.98 20 20 1.6e-06 0.00015 23.0 0.4 1 23 1351 1374 1351 1374 0.97
Sequence Information
- Coding Sequence
- ATGCCAAAAAATAGTCTGTGTTTAATCTGCTTGCGAGCTGATGTAAACCTCAAAGTTGTTGATAAGAGGTTAATAGAATTTCACGGTGAATTGTGCATTGTTTATTCCTGTTTTGCTATGGAGACCGATGATCCTAAATACTGCATGGTGTGTGAACATCTGTTGAGGAAGCTGTACAATTTTAAAGAGAAATGTGCACTGGCCATTACTATATTGCAGGAATGGAAGGTGACCGAACTGGAAAAAAAGCCACTGAACCAACTCTACACACTTCTACCCGAGAGTGGTCTAGGGGTTTGGACCCCAAATAACAGCAAGATATTTGACTATGAAGAAGCACCAAGTCCCATGTCAAATAATAAAGCAAAGCATGAAGCATTTTTAAATAATAGTACATCAAAAGAAACTGTGTTAAATGTAAACATGCCCAGACCAGCACCAGCACCTAAAATAAACACAAAATGGAGTTTGATTAAAAATCCAATTAAAATTGAAGACATAATTGTAGAAAAAGACTGTAAAGATTCACTGGGTTTTGAAGATACTCAATCTCAAAACGAAGATGATACCGAAGTTGAGGATCATTCTGATAATACTAGCTTAAACGGTGATGATAATGTAGAAAAATATATATTTATAGACAGCTTAAACATCAATGACATAAAAACAGATGTTTTGGATGACTCTAGCATTAACAGTGATGATTTCCGGGAAATAGATAAAGCTCTGGAAGAGTCTAGCAGTGATGATAGTGATGACAAAGATAAGGAAAGAAAAAGTAACTCAACAAAGAACAAATCCCTTGCTGAATTAGCTAACATATCACTTTCTGATGACGACTTTGTCACTGATGATGATACAGAAAAAACATGCAACATAACATGCATGAATATCAAGGGTGACAAGGACAAAGATAAAAATCAAAAACATGAATTTAAATCAAATGAATTATTAACTGAATTAGCGAACATATCTTTTTCCGATGATGAGATTTTCACTAACAATGATACAGAAGTAAAATGCAACACAAAGAATAAGACCAAAAATAAAAGTGACAAGGACAAGGGTGATGAAAAAATTAAAAAATTAAATTCTTATGATATATATCCTGAATCAGATATATCCTTGTCCGAAGAGGAAATCACTAATGCTGAGATAGAACTAAAATGCTTTAAAAGTAAAAAGAGCATTGAATGGGATAAAAGATTTGATGAAGCTGCAAACAAAATCATTGCTAACTTAGAAAACTGGAATGCTGATTTGGAGGCAATTCAAGAAGGTTATAAAAACATATTAAAAAATGACACTGACAAAAGTGTTACCGAGAAAAATAGTTTAAATACAAAAGGCCGGCATGGAAAAATATCAGTGAAAAGAGTGACGAACATAAGTAAAAAAATTGATTCAATGCAGAAAAGCTGTGAAACTATGATAGCTCAATATGGAGATGAGAGATCAGCATCCATTAAGACGTTGTTGATACCCGAGCTAAAGGCCAGGTTCGAGTTGTGGGAGCTGAAACCATTCGACGGCGGCTCGATAGACAAGGAACACATACTGAGCTGTCTCGACGGGAGAGTCTCTGAGCTAGTGCTGGTACAACTTTGGAGCGCCTTACAACGTAGAAAAAAGTTTTTCAGCAAGGAGGCATTGAGAATATTATGGACCATACAAAACAGGAACCAGAAGAAGGATTATGAATCTGTATTCACCATAGAGTACATGAACACGGCGCAGGAGATGAAGGCAGAGGTCCAGAACCGGAAGTCGTACGAGTGCTACATAATGGCAAAGTACAAATGCGAGAAGTGTTACCTCGGGTTCGGACATAGTAAGCAACTGGAAGCTCATATGAAAATGCATGTGAAGAGTCGGGGGAGCGCAGAGTGTCCCATATGCGGCGTGCACGCTGGCGGCCACAGCCGGTACAAGCACAGGAAGAGCCACGAGGCTGTCTACAAATGCAAAAACTGTCCCCTGGTCACATACAACAGACACACTATGATGAACCACTACAATCAGCACAAAGGCGTGAAGTACGAATGTCAGCCCTGCAATAAGACCTTCCGGAGTGCCTCTGCGTACAATACGCACCGCGGGTACGCACACCGCCGCGCGCACGTGTGCACCACCTGCGGCCGCACCTTCGAGACTGAGGAGATCCGGGACGCGCACCAGAAAGCACATCGGGTAAGGATTCCTTCTGCGTACAACACACACCGCGGGTACGCACACCGCCGCGCGCACGTGTGCACCACCTGCGGCCGCACCTTCGAGACTGAGGAGATCCGCGACGCGCACCAGAAAGCACATCGGGTAAGGATTCCTTCTGCGTACAATACGCACCGCGGGTACGCACACCGCCGCGCGCACGTGTGCACCACCTGCGGCCGCACCTTCGACACTGAGGAGATCCGCGACGCGCACCAGAAAGCACATCGGGTAAGGATTCCTTCTGCGTACAACACGCACCGCGGGTACGCACACCGCCGCGCGCACGTGTGCTCCACCTGCGGCCGCACCTTCGACACTGAGGAGATCCGGGACGCGCACCAGAAAACACATCGGGTACAGCCGACCACAGATGGCAGCACAAGCGTCAAGTGCGACGCTTGCGAGCTCTCATTCCCGTCGCAGGCGGTGTACGAGAGACACGCTCGTTTCTCGCACGGCTTCCATTGGCTCAGTCGTAAAAAAAGTATCAGCGCCAGAGAGAAACTAAACCCGCTGATGAAGAAGCTCTACTTCACGTGTCCGATGTGTAAAGCCGCTGGCAGCAGTTACAGCTGGCTGGTGCTGCACGTCCGCTCAGAACACAACGCAGACGTGGGCGAGCTGAACGCACACAAGCGCATTTATCTGTGTGATGTCTGCGGCAGAGGGTTCATGAGGGTTCATGGTGAGACTACTAACAGTTACAGCTGGCTGGTGCTGCACGTCCGCTCAGAACACAACGCGGACCTGGGAGAGCTGAACGCACACCAGCGCATTTATCTGTGTGATGTCTGCGGCAGAGGGTTCATGAGGGTTCATGGTGAGACTACTAACAGTTACAGCTGGCTGGTGCTGCACGTCCGCTCAGAACACAACGCGGACCTGGGAGAGCTGAACGCACACCAGCGCATTTATCTGTGTGATGTCTGCGGCAGAGGGTTCATGAGGGTTCATGGTGAGACTACTAACAGTTACAGCTGGCTGGTGCTGCAAGTCCGCTCAGAACACAACGCGGACCTGGGAGAGCTGAACGCACACAAGCGAATTTATCTGTGTGATGTCTGCGGCAGAGGGTTCATGAGTGTTCATGGTGAGACTACTAACAGTTACAGCTGGCTGGTGCTGCACGTCCGCTCAGAACACAACGCGGACCTGGGAGAGCTGAACGCACACCAGCGCATTTATCTGTGTGATGTCTGCGGCAGAGGGTTCATGAGGGTTCATGGTGAGACTACTAACAGTTACAGCTGGCTGGTGCTGCACGTCCGCTCAGAACACAACGCGGACCTGGGAGAGCTGAACGCACACAAGCGAATTTATCTGTGTGATGTCTGCGGCAGAGGGTTCATGAGGGTTCATGGTGAGACTACTAACAGTTACAGCTGGCTGGTGCTGCAAGTCCGCTCAGAACACAACGCGGACCTGGGAGAGCTGAACGCACACAAGCGAATTTATCTGTGTGATGTCTGCGGCAGAGGGTTCATGAGGGTTCATGGTGAGACTACTAACAGTTACAGCTGGCTGGTGCTGCACGTCCGCTCAGAACACAACGCGGACCTGGGAGAGCTGAACGCACACCAGCGAATTTATCTGTGTGATGTCTGCGGCAAAGGGTTCATGAACCGCTACAATCTGCGCGACCACTTGAACACACACACAGGAGTGCGGCCTTATGCGTGCGAATTGTGCCCGAAGCGCTTCACCACCCCCATGAGTAGGAAGAATCACCAGCAGTACCACTTCCCGCCCACGCACAAGTGCACACGCTGCGAGAAAATGTTCCACTCTAGCTCCAACCTGTTCAGCCACATGCGGACTCACATCCGTGACCGGCGGTTCAAGTGCAATATCTGTGGCAAGGGGTTCATTCATTCAGGCATGCTAAGAGAGCATATAAGAGGGGTCCATAACAACGTGCGTCGCGTCAGAAAGAGAGGGGGCACTGAAGTGGGAGTGGGGGCTGGCGAGCCAGGGGAGAGCGGGGGCGCCAGGTCATCCACTGCGGCGAGAACGAAACGTCTAAGGAGGAGAGTAGAGGAGAGTACAGACGAGAGCAGCGATAGTGACTGA
- Protein Sequence
- MPKNSLCLICLRADVNLKVVDKRLIEFHGELCIVYSCFAMETDDPKYCMVCEHLLRKLYNFKEKCALAITILQEWKVTELEKKPLNQLYTLLPESGLGVWTPNNSKIFDYEEAPSPMSNNKAKHEAFLNNSTSKETVLNVNMPRPAPAPKINTKWSLIKNPIKIEDIIVEKDCKDSLGFEDTQSQNEDDTEVEDHSDNTSLNGDDNVEKYIFIDSLNINDIKTDVLDDSSINSDDFREIDKALEESSSDDSDDKDKERKSNSTKNKSLAELANISLSDDDFVTDDDTEKTCNITCMNIKGDKDKDKNQKHEFKSNELLTELANISFSDDEIFTNNDTEVKCNTKNKTKNKSDKDKGDEKIKKLNSYDIYPESDISLSEEEITNAEIELKCFKSKKSIEWDKRFDEAANKIIANLENWNADLEAIQEGYKNILKNDTDKSVTEKNSLNTKGRHGKISVKRVTNISKKIDSMQKSCETMIAQYGDERSASIKTLLIPELKARFELWELKPFDGGSIDKEHILSCLDGRVSELVLVQLWSALQRRKKFFSKEALRILWTIQNRNQKKDYESVFTIEYMNTAQEMKAEVQNRKSYECYIMAKYKCEKCYLGFGHSKQLEAHMKMHVKSRGSAECPICGVHAGGHSRYKHRKSHEAVYKCKNCPLVTYNRHTMMNHYNQHKGVKYECQPCNKTFRSASAYNTHRGYAHRRAHVCTTCGRTFETEEIRDAHQKAHRVRIPSAYNTHRGYAHRRAHVCTTCGRTFETEEIRDAHQKAHRVRIPSAYNTHRGYAHRRAHVCTTCGRTFDTEEIRDAHQKAHRVRIPSAYNTHRGYAHRRAHVCSTCGRTFDTEEIRDAHQKTHRVQPTTDGSTSVKCDACELSFPSQAVYERHARFSHGFHWLSRKKSISAREKLNPLMKKLYFTCPMCKAAGSSYSWLVLHVRSEHNADVGELNAHKRIYLCDVCGRGFMRVHGETTNSYSWLVLHVRSEHNADLGELNAHQRIYLCDVCGRGFMRVHGETTNSYSWLVLHVRSEHNADLGELNAHQRIYLCDVCGRGFMRVHGETTNSYSWLVLQVRSEHNADLGELNAHKRIYLCDVCGRGFMSVHGETTNSYSWLVLHVRSEHNADLGELNAHQRIYLCDVCGRGFMRVHGETTNSYSWLVLHVRSEHNADLGELNAHKRIYLCDVCGRGFMRVHGETTNSYSWLVLQVRSEHNADLGELNAHKRIYLCDVCGRGFMRVHGETTNSYSWLVLHVRSEHNADLGELNAHQRIYLCDVCGKGFMNRYNLRDHLNTHTGVRPYACELCPKRFTTPMSRKNHQQYHFPPTHKCTRCEKMFHSSSNLFSHMRTHIRDRRFKCNICGKGFIHSGMLREHIRGVHNNVRRVRKRGGTEVGVGAGEPGESGGARSSTAARTKRLRRRVEESTDESSDSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -