Basic Information

Insect: Alsophila aescularia
Gene Symbol: -
Assembly: GCA_946251895.1
Location: CAMIUG010000905.1:557408-585332[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 1.2 1.2e+02 4.4 0.1 2 23 111 132 110 132 0.95

2 18 0.0034 0.33 12.5 1.5 2 23 136 158 135 158 0.93

3 18 0.58 56 5.4 0.4 3 23 377 398 375 398 0.94

4 18 1.5 1.5e+02 4.1 0.0 3 19 408 424 406 426 0.95

5 18 0.35 34 6.1 0.7 3 23 438 458 437 458 0.94

6 18 0.0079 0.76 11.3 3.2 1 23 506 528 506 529 0.95

7 18 5.5 5.3e+02 2.4 0.6 2 22 539 559 538 561 0.88

8 18 0.58 56 5.4 0.4 2 20 604 622 603 626 0.79

9 18 0.15 14 7.3 1.6 1 23 631 654 631 654 0.96

10 18 0.00018 0.018 16.5 2.7 1 23 660 682 660 682 0.97

11 18 0.00033 0.033 15.6 0.5 1 23 689 711 689 711 0.97

12 18 0.00049 0.047 15.1 2.5 1 23 716 738 716 738 0.96

13 18 0.00031 0.03 15.7 3.0 1 23 744 766 744 766 0.98

14 18 7.3e-06 0.00071 20.8 1.8 1 23 772 794 772 794 0.98

15 18 0.00019 0.019 16.4 2.5 2 23 801 822 801 822 0.97

16 18 0.012 1.1 10.8 0.1 2 23 832 854 831 854 0.96

17 18 5.8e-05 0.0057 18.0 1.1 1 23 859 881 859 881 0.98

18 18 0.0045 0.44 12.1 2.2 1 23 887 910 887 910 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	1.2	1.2e+02	4.4	0.1	2	23	111	132	110	132	0.95
2	18	0.0034	0.33	12.5	1.5	2	23	136	158	135	158	0.93
3	18	0.58	56	5.4	0.4	3	23	377	398	375	398	0.94
4	18	1.5	1.5e+02	4.1	0.0	3	19	408	424	406	426	0.95
5	18	0.35	34	6.1	0.7	3	23	438	458	437	458	0.94
6	18	0.0079	0.76	11.3	3.2	1	23	506	528	506	529	0.95
7	18	5.5	5.3e+02	2.4	0.6	2	22	539	559	538	561	0.88
8	18	0.58	56	5.4	0.4	2	20	604	622	603	626	0.79
9	18	0.15	14	7.3	1.6	1	23	631	654	631	654	0.96
10	18	0.00018	0.018	16.5	2.7	1	23	660	682	660	682	0.97
11	18	0.00033	0.033	15.6	0.5	1	23	689	711	689	711	0.97
12	18	0.00049	0.047	15.1	2.5	1	23	716	738	716	738	0.96
13	18	0.00031	0.03	15.7	3.0	1	23	744	766	744	766	0.98
14	18	7.3e-06	0.00071	20.8	1.8	1	23	772	794	772	794	0.98
15	18	0.00019	0.019	16.4	2.5	2	23	801	822	801	822	0.97
16	18	0.012	1.1	10.8	0.1	2	23	832	854	831	854	0.96
17	18	5.8e-05	0.0057	18.0	1.1	1	23	859	881	859	881	0.98
18	18	0.0045	0.44	12.1	2.2	1	23	887	910	887	910	0.97

Sequence Information

Coding Sequence: ATGCCTTCAGAAGATTCTGACGATGAGCCTCTGTCCGTATTGGCAGGGCTGAAAAAACGAGTCGAGTCAGAAGTTGAAATATTTCCAATTTTCCAATCTGATGATGCATCTACGAAGATAAAATCTCTCAGAAAAGAATGTGATGTGTCCATAAAACTGCAATCCTTGTTAGAAGATGAACTAACGCCTGTGGTGGAAAGGCCAGCAGACGTGTGGATGTATCTAACAGATTTGACTGCAACTGGGCCGTATAGCTGCTTGCTTTGCTCAGAGTGGTTCATAAATAAAAACAGAATAGTCATCCACTATGTGGTAGACCATAAGAAAGATTACTGTGGGATCTGCAGATATTTTGTTCCAAACAGAGAAGCATGGTGGGAGCATCTCAAATTCCACATGCCATGGAGATGCTCTCAATGTGAAGAAAGCTTTATGTCTCAATCCGATCTATGTGAACATTTTAGTAGTGTTCACAAACTGGTAAACTGTCGACTTTGCCACCTGCGTCTAGCTGATGATGAACAGTACCATAATCACCTTTTTAAAAAACACTGCATTTCAACTATAGCAAGTGTATATGGTGATGTTTTCTGGGAATTTGAGTATAGTAGAGGCTGCCAAAAATTCCTATGTTTACTATGCTCCAAAACAAACAATGTGGGTCGACCGTTCGCCGATCATTTTATGTCATACCATCACATGACACTCAAATGTTTTATGTTTCTCATTTCCGGAGCTGAGCTACCATTCAGCATCAAGGGTGTAGATTTGACCCCAGAGTTTATAGACACGGAGCTAAAAGCTTACAGTACGTATGGCTACGTTGATTTTGTTAAGAATCTCAAAGTTAAGCAAGAATGTATGCCTAACATGGACGAAGATTCAATAACAGTTGACTGTTACCCAGATTTAAAAGACGGCATTCTCATTGAAAACCACCAAGGAAATACAAAAATTGGTGAATTGGCAAGGGATTATAAAGGGGATGAAGACTTTGACACCACACTTATGGAAGTTATTATACTGCAGCAATGTTACCATGATTACATCAATATGGCACTTAAAGATGCCCTACCGCAATCTTCCAACATTAGTTACGTAGGTGTTAATCATTCTAAAAAGATAATCTGCGGCCTCTGTGGACATGTGAGTGAAACTGTAAACACATTTGAGATGCACATGACTAAAATGCATTCCGTAAGAACTCTGCCAGTTTATTGGTGCAGAGTTTGTGCTACAGTTTTTGATAGTTTGACTGAATTAGAAGCCCATGGTAGTGAAGAATTAGGAGGGTTTGAAGACCTGTGGCTTTGTCAGTTTTGCGACAAGGAGTTTGATGGAAGACAGGAGACACGGAAGCACACAGCAGAACACTGGGATGAGATTGAATATGATAATTGTTTCAGCCCACATTTAGGCTTCAAGTGCAGGTTTTGCCCGACCCTGTTTTGGAACGAAACTGATAGAAACGTTCATCACGTTAGAGTGCATTTTCAAAAGCATATAAGCGATTTTTATAAATGTACTATCTGTAGTGAAGTGTTTGGTGATAAGGTCTTTTTCATTCACCACTACTTAGAACATCATAGCCTTAACAACCCGACATATCTCCTCAAATGCTGCAAATGCTCCATTGTGCTCGAAAATGTGGAAGAAATGAGGAGACACTTCGAGGCCGAGCACCCTCATGCAAGGAAGATATTTTGTTCCATGGATCAATGCAGGTTCAGACCCTTTTGCCACAGGAAGACTTTTCTTATACATTTAAAGTCTATCCATGACCCAGCGAGTCGCCAATCTCGCTCAGTGACTTGCAATGTGTGCGGTCTAGAGTTCAACAGCAGTAAAGCTTGCAGTGTGCACGCCTTGCAAGTGCACGGGCCAGCGAAGTTCAAGTGCACCCTCTGCAATGAGGTGCTGCACACTAGCGATGAGAGAAAGATCCACTACCTCATTCGACACCCGGGCCGTTACCAGTACCAGTGCGACACGTGCGATAAGTCCTTCCAGTATAAATCCTCACTGTACATGCACAAACAGGATCACTCGCCAAACAAGAAAGATTATGCTTGCAACTACTGTGGAAAAGTATTTTTGAAAAAAGATTCCTTCCGGGAGCACGTACTTATCCACGAAGCTCCACGCCACGCTTGCTCCTTCTGCCCGATGCGCTTCGTACAACGCTCCAACATGCTTCGCCACGAACGAAGGCACACTGGAGAGCGGCCGTATGCATGCAAGTACTGTCCGAGAACTTTTTCTGACAAAGGCGCTTGCACTTCACATACAAGGACTCATTTAAAAAACACATCGTATGCATGTGTGTATTGCGGACAAACCTTCGTACAGAAGTCGAAGTTGACTTACCACACTCGGAAACACACTGGAGAGAATTTGGAAACGTGCTCGCTCTGCTCCAAGATATTCACAAGCGCGTGCTCACTGCGGGAACACATGAAGATACATCAGAGGAAAAAGATGAAAAAGACTATCAAGTGCCCCCTCTGCAAAAATATGTACCCCGACGAGAGGGGCATGATGCGTCACATGCGCGCCTCACACACCGGCGTGCGGTTCAAGTGTCCGCTGTGCCGCAAGTCTGTCTGTTCGGCCAGCTCACTGCGAGAGCACGTCATCACGCACAGCCGGGTGAAGGCATACAGGTGCAAGGTGTGCCCGAAATCCTACCACGTCAGGAAGTCGATAATTAAGCACCTGCAAATCCGACACGGAGTCAAACTGCAGGAGGTAAAGTTCAACTACCGCCACCTCGAGCCTAAAGAATACAACCTCGGTCTCGACGACGACGTCATGGAGAGAATCTTCGGGAACCTCAAGAAGAAACCAAACACAGACGTACTCATTGGAGATTTCGTCACTTTCACCAAGAACCTTACCCTGCCCGGCGAGCTTAGCCAGGTACAAGATACATGCAAGTCTGATCCCTCAGGAGAGAGTGAGACTGAAGATGAAAACATTGTTAGAGAAGAGAGTATTACAGTTAAGAAAGAGCCGGATGAATATGAACAAATTCCTTTACCAGATTTTGTGAATGTTAAGATCGAATCTGTGGAAGAGAATGAAGGATTTGATACAGAAATGGCCTAA
Protein Sequence: MPSEDSDDEPLSVLAGLKKRVESEVEIFPIFQSDDASTKIKSLRKECDVSIKLQSLLEDELTPVVERPADVWMYLTDLTATGPYSCLLCSEWFINKNRIVIHYVVDHKKDYCGICRYFVPNREAWWEHLKFHMPWRCSQCEESFMSQSDLCEHFSSVHKLVNCRLCHLRLADDEQYHNHLFKKHCISTIASVYGDVFWEFEYSRGCQKFLCLLCSKTNNVGRPFADHFMSYHHMTLKCFMFLISGAELPFSIKGVDLTPEFIDTELKAYSTYGYVDFVKNLKVKQECMPNMDEDSITVDCYPDLKDGILIENHQGNTKIGELARDYKGDEDFDTTLMEVIILQQCYHDYINMALKDALPQSSNISYVGVNHSKKIICGLCGHVSETVNTFEMHMTKMHSVRTLPVYWCRVCATVFDSLTELEAHGSEELGGFEDLWLCQFCDKEFDGRQETRKHTAEHWDEIEYDNCFSPHLGFKCRFCPTLFWNETDRNVHHVRVHFQKHISDFYKCTICSEVFGDKVFFIHHYLEHHSLNNPTYLLKCCKCSIVLENVEEMRRHFEAEHPHARKIFCSMDQCRFRPFCHRKTFLIHLKSIHDPASRQSRSVTCNVCGLEFNSSKACSVHALQVHGPAKFKCTLCNEVLHTSDERKIHYLIRHPGRYQYQCDTCDKSFQYKSSLYMHKQDHSPNKKDYACNYCGKVFLKKDSFREHVLIHEAPRHACSFCPMRFVQRSNMLRHERRHTGERPYACKYCPRTFSDKGACTSHTRTHLKNTSYACVYCGQTFVQKSKLTYHTRKHTGENLETCSLCSKIFTSACSLREHMKIHQRKKMKKTIKCPLCKNMYPDERGMMRHMRASHTGVRFKCPLCRKSVCSASSLREHVITHSRVKAYRCKVCPKSYHVRKSIIKHLQIRHGVKLQEVKFNYRHLEPKEYNLGLDDDVMERIFGNLKKKPNTDVLIGDFVTFTKNLTLPGELSQVQDTCKSDPSGESETEDENIVREESITVKKEPDEYEQIPLPDFVNVKIESVEENEGFDTEMA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -