Basic Information

Insect: Alsophila aescularia
Gene Symbol: -
Assembly: GCA_946251895.1
Location: CAMIUG010001774.1:257900-260753[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.058 5.7 8.6 0.3 3 23 2 23 1 23 0.92

2 14 0.88 85 4.9 0.1 2 19 130 147 129 149 0.92

3 14 0.021 2.1 9.9 1.3 1 23 158 181 158 181 0.94

4 14 0.013 1.2 10.6 1.9 1 23 361 384 361 384 0.92

5 14 0.1 9.9 7.8 0.1 2 23 411 433 410 433 0.94

6 14 0.92 89 4.8 3.2 2 23 456 477 455 477 0.96

7 14 0.0051 0.5 11.9 0.0 1 23 481 503 481 503 0.93

8 14 0.00054 0.053 15.0 2.1 1 23 508 531 508 531 0.97

9 14 0.015 1.5 10.4 1.2 1 23 540 563 540 563 0.94

10 14 0.002 0.19 13.2 0.2 3 23 572 593 570 593 0.93

11 14 0.00024 0.023 16.1 2.9 1 23 599 621 599 621 0.94

12 14 1.4e-08 1.3e-06 29.4 1.1 1 23 627 649 627 649 0.99

13 14 0.00015 0.015 16.7 2.2 1 21 655 675 655 677 0.95

14 14 0.0008 0.078 14.4 1.2 1 23 681 704 681 704 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.058	5.7	8.6	0.3	3	23	2	23	1	23	0.92
2	14	0.88	85	4.9	0.1	2	19	130	147	129	149	0.92
3	14	0.021	2.1	9.9	1.3	1	23	158	181	158	181	0.94
4	14	0.013	1.2	10.6	1.9	1	23	361	384	361	384	0.92
5	14	0.1	9.9	7.8	0.1	2	23	411	433	410	433	0.94
6	14	0.92	89	4.8	3.2	2	23	456	477	455	477	0.96
7	14	0.0051	0.5	11.9	0.0	1	23	481	503	481	503	0.93
8	14	0.00054	0.053	15.0	2.1	1	23	508	531	508	531	0.97
9	14	0.015	1.5	10.4	1.2	1	23	540	563	540	563	0.94
10	14	0.002	0.19	13.2	0.2	3	23	572	593	570	593	0.93
11	14	0.00024	0.023	16.1	2.9	1	23	599	621	599	621	0.94
12	14	1.4e-08	1.3e-06	29.4	1.1	1	23	627	649	627	649	0.99
13	14	0.00015	0.015	16.7	2.2	1	21	655	675	655	677	0.95
14	14	0.0008	0.078	14.4	1.2	1	23	681	704	681	704	0.98

Sequence Information

Coding Sequence: atgtgctgcttctgcgacgaacaatacattgatccagtagacctcaaaattcacactctggaagatcacgatgacaaaacaaaagacacttttatgcaaaaagtgaacatcaaaagctttttagtaaagctggatgttacatctttagaatgcagtatatacggcgcggggattgatgatttcgaatgcctgtacgaacatcttgaaggtcacggtaaagttatgtacttgaacatgaggaattacatattgaccttcaatttcgatgttggctctttgaaatgcaccgtatgCGATGCTGAGTTATGTAATATCTGCACATCCGGGTTCCTAAATCTGAATATGATCGACGCTCACTACAACTTTATCCACCGCAAGGGTTCCGACCCCTGCGCATTCTGCCCGGAGATATTCGAAACCAGTTCTAAGAAGAAAAATCACGAAGTATCTGTCTATGAAGAATTGAGATGCTATAAATGTGGCTACTGCGACAGAAAGTCCAAATCGTTTGACCAGAAACGCGTACATTTGGCGAACGAGCATGATGTCCGGAAACCTGCCCTGAAGTGTATCCAACCTAACATCGGAAACGAGGGAATTAAGAAAGAAGTGGAAACCAACTGGGGAATAACAATCAAGAAGATTAAAAAATTACCCGAAAGCGAGTCACGATCCTTTAAAATGAAAACCAAATATTCTCAGTTAGTAACTAAATTAAACTATCGGATATCAGACGAAAAAGTAGAACCAGAAAACAGCAAAAACAGACGCGAAACTAATAAGCCCAAAAGACGTTATAGCACAATGAAGATGCAACGAAAACTTAACGTCAACATAACTAACATAAAGTACGTAGAAAACGAAATATCTGAAGCAGTAGCAAAAAATAATGATGTCAGAAAACCGAAGCCTGCCAAAAGAAAGGTGCCTCTAAAAGTAGAGTTAAAACCACCGGAAGGTGTTAAGGAAAGTGAGGCAACGACTTGTCCAACTGAAGTGGACAAACACCGCTTCAACGTCCGCGCCATCTTGCACTACtcgaatgctaccccgatccggactcactatcttgggaacggtttcgcgtgctgcttttgtgaaaaattcttccccaaggctgccgacctgaagacccacactgtatccaaccacgacaaaagtgaaaagaacaaattcatgcaaaaggccttcgtgttttcttttcttgtgaaactcgacattacaggattgagttgcaatctttgcaaaacggaattggacagactcgaggatttagtcacccatttgaaagcgatgcacaaaaaatctctctataccgatatgaagagtcaaatagtgtgctttaaactcgacaacgatgtgcttaaatgcatgttttgccaactagagtgcaatagtttcaaaactctgctcgaacatatgaaccaacactacaggaattttatatgcgagctttgcgacgccggatttgtcaatcagaggatgttaatagcgcatgccgagggacataagtccgggccattcgaatgcaatctttgcaagaaagtgtttgataggttcaaagcatttaagtaccacgagaaaactgcacattctgtttcgaaagcattaaatagacacaaatgcttccaatgcggcgaaaaatttgccaaagcgagactcaaaagggaacacatgatcgaagtgcatggagctgaattcgccaaagtgccatgtctagcttgtgaaaggacctttcgagataaaaacgctttgcgtatccacacgcagcgagaccatttgatggagagaaggttcaaatgcaccacgtgtgacaagacgttctttacttatgatttgttgaaaaaccacaatgtctcgcacacaggatcgcgtgatttcaaatgcgattattgcggtaaagacttcgggagaaagaaaaatctgcaggcgcacatgcgtattcacagtaacgattgcaagttTGTCTGCCAGGTTTGTCAGAAGGATTTCAGTAGGGAGTCAACCCTTGCGACGCATATGCAATGCCATACTGGCGAGTTCAGCTGCGAGGAGTGCTCTCAGAAGTTTACTTTGCTGCCTAATTTGCATAGCCATCTGATGACAGTGCATGGGAAAATATACCCACTGTTTCAGAGTTAG
Protein Sequence: MCCFCDEQYIDPVDLKIHTLEDHDDKTKDTFMQKVNIKSFLVKLDVTSLECSIYGAGIDDFECLYEHLEGHGKVMYLNMRNYILTFNFDVGSLKCTVCDAELCNICTSGFLNLNMIDAHYNFIHRKGSDPCAFCPEIFETSSKKKNHEVSVYEELRCYKCGYCDRKSKSFDQKRVHLANEHDVRKPALKCIQPNIGNEGIKKEVETNWGITIKKIKKLPESESRSFKMKTKYSQLVTKLNYRISDEKVEPENSKNRRETNKPKRRYSTMKMQRKLNVNITNIKYVENEISEAVAKNNDVRKPKPAKRKVPLKVELKPPEGVKESEATTCPTEVDKHRFNVRAILHYSNATPIRTHYLGNGFACCFCEKFFPKAADLKTHTVSNHDKSEKNKFMQKAFVFSFLVKLDITGLSCNLCKTELDRLEDLVTHLKAMHKKSLYTDMKSQIVCFKLDNDVLKCMFCQLECNSFKTLLEHMNQHYRNFICELCDAGFVNQRMLIAHAEGHKSGPFECNLCKKVFDRFKAFKYHEKTAHSVSKALNRHKCFQCGEKFAKARLKREHMIEVHGAEFAKVPCLACERTFRDKNALRIHTQRDHLMERRFKCTTCDKTFFTYDLLKNHNVSHTGSRDFKCDYCGKDFGRKKNLQAHMRIHSNDCKFVCQVCQKDFSRESTLATHMQCHTGEFSCEECSQKFTLLPNLHSHLMTVHGKIYPLFQS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -