Basic Information

Insect: Alsophila aescularia
Gene Symbol: -
Assembly: GCA_946251895.1
Location: CAMIUG010000593.1:462921-478267[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.011 1 10.9 0.1 1 23 202 225 202 225 0.96

2 11 0.013 1.2 10.6 4.4 1 19 288 306 288 311 0.91

3 11 2.2 2.2e+02 3.6 0.4 6 23 321 338 319 338 0.96

4 11 0.00017 0.017 16.5 0.4 3 23 346 366 344 366 0.96

5 11 1.9e-06 0.00018 22.7 1.0 1 23 374 396 374 396 0.98

6 11 0.00088 0.085 14.3 1.4 1 23 405 428 405 428 0.97

7 11 0.0052 0.5 11.9 0.1 1 23 434 456 434 456 0.97

8 11 7.1e-06 0.00069 20.9 1.3 1 23 462 484 462 484 0.97

9 11 0.001 0.097 14.1 0.9 1 23 489 511 489 511 0.98

10 11 7e-06 0.00068 20.9 4.1 1 23 517 539 517 539 0.97

11 11 0.00033 0.032 15.6 2.1 2 23 546 568 545 568 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.011	1	10.9	0.1	1	23	202	225	202	225	0.96
2	11	0.013	1.2	10.6	4.4	1	19	288	306	288	311	0.91
3	11	2.2	2.2e+02	3.6	0.4	6	23	321	338	319	338	0.96
4	11	0.00017	0.017	16.5	0.4	3	23	346	366	344	366	0.96
5	11	1.9e-06	0.00018	22.7	1.0	1	23	374	396	374	396	0.98
6	11	0.00088	0.085	14.3	1.4	1	23	405	428	405	428	0.97
7	11	0.0052	0.5	11.9	0.1	1	23	434	456	434	456	0.97
8	11	7.1e-06	0.00069	20.9	1.3	1	23	462	484	462	484	0.97
9	11	0.001	0.097	14.1	0.9	1	23	489	511	489	511	0.98
10	11	7e-06	0.00068	20.9	4.1	1	23	517	539	517	539	0.97
11	11	0.00033	0.032	15.6	2.1	2	23	546	568	545	568	0.95

Sequence Information

Coding Sequence: ATGGCTTCAAATCATATGGACTTGTGTAGATTATGTGCTTCAAAAGATGAATTCTCAAAAGATCTATTAGATGAGAGCAATAAAAATGTTCTCAAAATGATACAAGATTTTATACAAATTTTTGTCTTTGAAAACGAAAATCTGCCTACAAAAATTTGCCTCAACTGTGAAGACAAAATGGTTTCATTCCAGTTGTTTGTGTTGGAATGCTATAAGGTCCAGGACATGTTACGTAAAATGTATGAGAATGCTTTGGGGACCCTAGACATTAAACTTGAGCAGCACAGTTCCACCGTGATAGTGAACAGTTCAGTTATCAAGTCTGAGGTGAAAGATGAAATGACAGCTGAAGATATTGTCACTGCACTGAAAAATGAGGAAACATTGACAGAAATTAGTTTATATGATGACGATGATGATGACCACAATGATTTACATAACGATGATGAAGATGATGACGATTATTTGGATAATGTTGCCATCGCTACTCTTAAACAAATAAAAAGTCAACAGATCAAGAGAAAAGTTGAAAGCAAAGTGGACACGGAAAAACTTCATGATATTTTAAAGACACCCAATTTTAAAGTTAAAGATCTTGTAAAATTTGAATGTGTATTGTGTGAAGAGAGATTGAAAAGCTGGGCTAACTTACGAGGGCACTATGCAAAAGATCACAAAAGTGAGCCTGTCGTTATCTGCTTATGTGGATATGAAATTAAGTCTAAAAGTATCCTTTACAAACATGTATCCGATCATAAACTAGAGAGCAAAAAGTTGAACAAAACTGTTGAAAGCGAGGACGAAAAGCAGGATCAAAATGATGGAAAATATGCAAACCTCAATGTAAAAGATTTTGTAAAGTTTATTTGCCACGAATGTGAAAGAGAATGCTCGAGCTGGTACAGTCTGAAGGCTCACTGTCAAGAAGTACACAGCACCGTCCCTATTGTCGAGTGCAGCTGTGGCATCACGCTCAAATCTAAGTCGGTCATGTACAAGCACATACAAGATCATAAAAACCCAAATGTTTTGGCATGTGACAAATGTCCTAGAGTAACGAAAACCCAAGCAGCTTTGAACAAGCACAAAATGAGACATGTTCCTAAGTCAGAAAGAAAGTACACTTGCGAGTCGTGCGACAAAATATTCACTACGAAAGACGCGCTGAAGTCGCACGAGAGGTCGCATATTCCAATAGAAGATAGGAAAATATATCACTGTGAAGTCTGTAATCTCAGATTCACGACGCGTTCTTCCGCGGCGTCGCACAAGCGCGTGGTGCACGACAAGATAAAGGGGTACGTGTGCGACCTGTGCGGGTACGCGTGCGGCACGGGCGGCGAGCTGCGCCAGCACCGCGCCATACACAGCGACGACAAACCTTTCGTGTGCAGAAAGTGCGCCAAGCCTTTCAAGACGTACTCCAACCTGAAGACTCACATGGATATCCACGAGGACACGTCCTACGAGTGCTACGTCTGCCGGCGCGTGCTCAACAGTCGGCGTACGCTGCGCAAGCACCTGCTAGTGCACGAGGACAAGTGTCGGCACATCTGCTCCTACTGCAACAAGGCGTTCAAGCGACGGCAGACCTTGAAGGTTCACATGTACACGCACACGGGCGACAAGCCGCTCACGTGCAAGTGGTGCGACGAAAGATTTGCTTACGCGTCCACTCTGCGCTCGCACAGACTGCGCTGTCACCCGGACAAGATGGCGGCGCAGGCGCACGGCAGTTATCAGTCCTACTCACACGTCACGATGCAAGAGCAATCAAAAGATAAGCTGTGGACGTGCACACGTTCAACGAAAACTTCACTTACTTACGCGTCCATGTTGGTCTCGCACTGGCTATGCTGTCACCTGGACAAGATCATGGCACAGAGGCATGGCTGTTGTGAGACATACTCACACTTTATCATACAAAATGTGTACACTAACAATTCATTAATCAAAATACAAGCCGTGCACGTGCACACGTTGATCGAAAACTTCACGCACATACGCGTCCATGTTGGTCTCGCTCTGCCTATGCTGTCACCTGACCAGATAACGGCACGGAAGCATGGCAGTTGTGAGACATACTCACACGTCATCATACAAAAGGTGTACACTAACAATTCATTAATCAAAATACAAGCTGTGGACGTGCACACGTTGAATGAAAACTTCACTTACATACGCGTCCATGTTGGTCTCGCTCTGGCTATGCTGTCACCTGTACAAGATGGCGGCACGGGAGCATGGCAGTTGTGA
Protein Sequence: MASNHMDLCRLCASKDEFSKDLLDESNKNVLKMIQDFIQIFVFENENLPTKICLNCEDKMVSFQLFVLECYKVQDMLRKMYENALGTLDIKLEQHSSTVIVNSSVIKSEVKDEMTAEDIVTALKNEETLTEISLYDDDDDDHNDLHNDDEDDDDYLDNVAIATLKQIKSQQIKRKVESKVDTEKLHDILKTPNFKVKDLVKFECVLCEERLKSWANLRGHYAKDHKSEPVVICLCGYEIKSKSILYKHVSDHKLESKKLNKTVESEDEKQDQNDGKYANLNVKDFVKFICHECERECSSWYSLKAHCQEVHSTVPIVECSCGITLKSKSVMYKHIQDHKNPNVLACDKCPRVTKTQAALNKHKMRHVPKSERKYTCESCDKIFTTKDALKSHERSHIPIEDRKIYHCEVCNLRFTTRSSAASHKRVVHDKIKGYVCDLCGYACGTGGELRQHRAIHSDDKPFVCRKCAKPFKTYSNLKTHMDIHEDTSYECYVCRRVLNSRRTLRKHLLVHEDKCRHICSYCNKAFKRRQTLKVHMYTHTGDKPLTCKWCDERFAYASTLRSHRLRCHPDKMAAQAHGSYQSYSHVTMQEQSKDKLWTCTRSTKTSLTYASMLVSHWLCCHLDKIMAQRHGCCETYSHFIIQNVYTNNSLIKIQAVHVHTLIENFTHIRVHVGLALPMLSPDQITARKHGSCETYSHVIIQKVYTNNSLIKIQAVDVHTLNENFTYIRVHVGLALAMLSPVQDGGTGAWQL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00034073;
90% Identity: -
80% Identity: -