Aaes022066.1
Basic Information
- Insect
- Alsophila aescularia
- Gene Symbol
- -
- Assembly
- GCA_946251895.1
- Location
- CAMIUG010001019.1:121153-129627[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.53 51 5.6 0.1 3 23 115 136 115 136 0.97 2 17 0.0012 0.12 13.9 0.3 1 20 159 178 159 181 0.93 3 17 0.053 5.2 8.7 3.7 1 19 185 203 185 208 0.88 4 17 0.00015 0.014 16.7 3.5 1 23 240 263 240 263 0.97 5 17 0.0081 0.79 11.3 1.2 1 20 269 288 269 292 0.89 6 17 4.4e-05 0.0043 18.4 1.4 1 23 296 318 296 318 0.98 7 17 9.6e-06 0.00093 20.5 1.1 1 23 324 346 324 346 0.97 8 17 0.00027 0.026 15.9 3.1 1 23 352 375 352 375 0.96 9 17 1.1e-05 0.001 20.3 0.8 1 23 416 438 416 438 0.97 10 17 0.56 54 5.5 0.0 2 23 531 553 530 553 0.94 11 17 0.0091 0.89 11.1 0.3 1 23 576 598 576 598 0.98 12 17 0.0029 0.29 12.6 0.9 1 20 602 621 602 625 0.89 13 17 0.0023 0.22 13.0 1.3 1 23 658 681 658 681 0.96 14 17 0.00042 0.041 15.3 0.2 1 23 687 710 687 710 0.89 15 17 0.0013 0.12 13.8 5.0 1 23 714 736 714 736 0.97 16 17 0.00024 0.024 16.0 0.7 1 20 742 761 742 764 0.94 17 17 0.003 0.29 12.6 2.9 1 23 770 793 770 793 0.96
Sequence Information
- Coding Sequence
- ATGGAATATCGCCGAGCTGAGGCAGAAAGAGCACACGAGCGGCGCGTCGCCAGGTCCCATCGATCGCCACGCCAAGAGTCGGCCTTACTCCCGTACCGCGCCATTAGATTGATTTCTCCCAATGTCATCGCGCGGAAAAACGCCACTCTGTTGGTGCAGTACACGACGGCTTATCCGTTCAAACTGCCGTCCGATGATGTCTGTTGTATCGTCTGCTGCAAGGAGTTCCACGATCCGGAAGACTTTAGGTGCCACATGATGGAAGAAGACCACAAATCTTCACAAAAAATTGTGCGCTTTCTTAAAAGGGATGTCATTAAAGTTGACATCACCGATCTAGGCTGCCGAATTTGTTCTCTAAGTTACAACAGCATCGACGATATCGCTGCCCATTTGTCCACGGTGCATTGCGTATCCGATCTTAATTTAAAATACGATTTAGGCGTTCATTCTTTTAAGATATACAAAGATAATTATACGTGCTTACAGTGCCCCAGAAAATTTGTCAATCTACGAGCTTTGAGCAGACACATACCAAGCCATTATTTGAATCATACGTGCGAGACCTGCGGAAAGTCTTATGGGAACAAACTAGCGCTTAAACTGCACTGTAAACTTACACACCAAAGTTTGAAAATATGCAGACCGTGTAAAAAGGGATTTGATTCCATAGAAGAAAAACAAAAACATTTAGGCGAGTCTCCGAGATGCTGGATGCACAAATGCAAGGTCTGCGGGGAAAGATTCAAGACCTGGACTTTGAAAACCAAGCATACTCAAACCGTACACAATACTGTGAATCACTACACTTGCCCTGAGTGCCCGGAGGTGTTTACTGACTGCATTAAGCGTCGGAGGCATTTTGTCGCCACTCACACGGATAAATTTAAATGTACGTTTTGTGATAAGAAATTTGATGCTAAATCCAAACTGATCAATCACTTACTTGTCCACTCGTCGGAAAAGAAGTTTCAGTGCGACGTATGTCTGAAAAAGTTTAGCAGAAAGAAAAGTTTGAAAGCACATTTGGTTGTCCACATGGAGGACAAACCTTACAAGTGTAGGACCTGCAATAAACAATTCAATCAACGCGTCAGTTTGAAGACTCATGTATCGTCATATCATCCTGAAAAGGGAACGCCGAAACCTAACTCTAAAAGGGTGTTTACTGACAACACGAAGCGTCAGAAGCATTTTATCGCCACTCACACGGACAAACTTAAATTCAACTCGTCGGAAAATAAGTTTCAATGCAACGTATGCCTGAAAGAGTTTAGCAGAAAGAAAAGTTTGAAAGCACATTTGGTTATCCACATGGAGGACAAACCTTACAAGTCCGACTTTTCTATTGTTCTAGAAATTTCTCCCAATGTCATCGCGCGGAGAAACGCCACTCTGTTGGTGCAGTACACGACGGCTTATCCGTTCAAACTGCCGTCCGATGATGTCTCTTGTATCGTCTGCTGCAAGGAGTTCCACGATCCAACAGACTTTAGGTGTCACATGATGGAAGAAGACCACAAATCTTCACAAAAGATGTTGCGCTACACTCCTAAATCCTATGTCATAAAAGTTGACATCACAGAACTACGCTGCCGAATATGTTCCCTAAATTATAACAGCGTCGACGATGTCGCTGCCCATTTGTCTTCGGTACATCGTGTATCCGGTCTTAACTTAAAATACGATTTAGGCGTTCATCCTTTTAAAATTTACAAAGATAATTATTCGTGCTTATTATGCCCCGGAAAGTTTGTCAGTCTACGCGCTTTGAGCAGACATACACAGAGCCATTATTTGAATCATACGTGCGAGACTTGCGGAAAGTCTTATGGGAATTTAAATGCGCTTAAAGTGCACAGTACGTTCGCGCACCAAGGCTTGAAAGTCATATGCAGACCGTGTAAAAAGGGATTTGATTCCATACAAGAAAAGCAAAACCATTTAGCCGAGTCTCCGAGATGTTGGATGCACACATGCAACATCTGCGGGGAACGATTCATGTCAAGGACATTGAGAATCAAGCATGCTCAAACCGTACACAAAACTGAGAACCAATACGCTTGCCCTGAATGTCCGGAGGTGTTTACTGACAACTCGAAGCGTCAGAAGCATTTTATCGCCAACCACACGGAAAAATATAAATGCTCGTGCTGCGATAAGAGATTTTCTTCCAAATTCTCACTTAGGAACCACACCGCTGTACATTCAGCGGAAAAAAAGTTCAAATGCAGTGTTTGCTTAAAGGAATTCAGTACGTTGAATAATTTGAAACAACACTTGCCTATCCACATGGAGGACAAACCGTACAAGTGCAGGACCTGCAATAAACAGTTCAATCAACGCGTCACTTGGAAGACTCATGTATCGTCATATCATCCTGAGATGGAAACGCCGAAACCTAACTCTAAAACTGAGTAA
- Protein Sequence
- MEYRRAEAERAHERRVARSHRSPRQESALLPYRAIRLISPNVIARKNATLLVQYTTAYPFKLPSDDVCCIVCCKEFHDPEDFRCHMMEEDHKSSQKIVRFLKRDVIKVDITDLGCRICSLSYNSIDDIAAHLSTVHCVSDLNLKYDLGVHSFKIYKDNYTCLQCPRKFVNLRALSRHIPSHYLNHTCETCGKSYGNKLALKLHCKLTHQSLKICRPCKKGFDSIEEKQKHLGESPRCWMHKCKVCGERFKTWTLKTKHTQTVHNTVNHYTCPECPEVFTDCIKRRRHFVATHTDKFKCTFCDKKFDAKSKLINHLLVHSSEKKFQCDVCLKKFSRKKSLKAHLVVHMEDKPYKCRTCNKQFNQRVSLKTHVSSYHPEKGTPKPNSKRVFTDNTKRQKHFIATHTDKLKFNSSENKFQCNVCLKEFSRKKSLKAHLVIHMEDKPYKSDFSIVLEISPNVIARRNATLLVQYTTAYPFKLPSDDVSCIVCCKEFHDPTDFRCHMMEEDHKSSQKMLRYTPKSYVIKVDITELRCRICSLNYNSVDDVAAHLSSVHRVSGLNLKYDLGVHPFKIYKDNYSCLLCPGKFVSLRALSRHTQSHYLNHTCETCGKSYGNLNALKVHSTFAHQGLKVICRPCKKGFDSIQEKQNHLAESPRCWMHTCNICGERFMSRTLRIKHAQTVHKTENQYACPECPEVFTDNSKRQKHFIANHTEKYKCSCCDKRFSSKFSLRNHTAVHSAEKKFKCSVCLKEFSTLNNLKQHLPIHMEDKPYKCRTCNKQFNQRVTWKTHVSSYHPEMETPKPNSKTE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -