Aaes010428.1
Basic Information
- Insect
- Alsophila aescularia
- Gene Symbol
- -
- Assembly
- GCA_946251895.1
- Location
- CAMIUG010000399.1:386585-388327[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.018 1.8 10.2 2.8 2 23 176 197 175 197 0.97 2 13 1.1e-07 1.1e-05 26.5 3.4 1 23 203 225 203 225 0.98 3 13 1.6e-06 0.00015 22.9 0.6 1 23 253 275 253 275 0.99 4 13 0.0056 0.55 11.8 0.5 1 20 281 300 281 301 0.95 5 13 2.5e-05 0.0024 19.2 1.4 1 23 313 335 313 335 0.99 6 13 1.7e-05 0.0017 19.7 1.2 1 23 341 363 341 363 0.96 7 13 0.00012 0.012 17.0 2.3 1 23 369 391 369 391 0.98 8 13 2e-06 0.00019 22.6 3.8 1 23 397 419 397 419 0.98 9 13 4.1e-05 0.004 18.5 0.7 2 23 426 448 425 448 0.93 10 13 0.51 50 5.6 0.2 3 23 455 472 454 472 0.92 11 13 0.0024 0.23 12.9 1.4 1 21 478 498 478 501 0.91 12 13 0.0059 0.58 11.7 0.3 1 23 507 531 507 532 0.93 13 13 0.0023 0.23 13.0 2.7 1 23 538 561 538 561 0.96
Sequence Information
- Coding Sequence
- ATGGAGTTCAAGATATGTCGCGTGTGCCTCGACAGGACGGCCACGATATCCGTGTTCAACAAGCAAGACGACGTGCAGTACTGTGCCAAGATCATGAAGTGCGTGAGCGTGGTGATCGCGGAAGGTGACGGATTCCCGGACGCCATCTGTGAGGGTTGCGCTGGCGACCTGGCCGTGGCCTACGAGTTCGCGACGCGCTGTGAAGCCTCCGACAAAGCGCTGCGCTGCCTCGACCTGCTGCAGACCGCCGAGCCTGAACCCGAGACCAAACCCCAAGCAGAACCCATTAAACGTGAAGTCAAACCTGAATATGACATGTCCTTCACTCAAAACGAAAGCTCGGAGCCCTATGATACCTTTCTAGATAGTGAATCGCTTCCTGCATATCACTGTAAAAATGAATACAAAAATGAAAAACCTGAGACTTATACAAATGGATGCACTTTTGGGAGAAATAAGTATATTAAAAAGAAAATACCAGATTATTTGCGTACTAGAAAATTAAGACTTAAAACGGGTCCCATTCAATGTGTGATTTGTGATAGGACACTCACCTGTCATTCTGCATTTGAACTGCATATGCGTACACACACTAAAGAGAGACCATTTTCTTGTGATATCTGCAAGAAAACATTTTCAAATAAATACTCTTTGAAAAAGCACATACAAAGACATTTTGGATTAACTAATTTATGTGACAATAATAAGACTACAAAGATATTAGATAAGAGGAGGAACAGGCCTAAAATGGGACCCTTCCAATGTTCAACATGCGGAAGGATGGTGTCAAGCCGTTCAGCAATGGAGAACCACATGCGCACTCACTCAGGTGAAAAGCCTTTTGCTTGTGAACTTTGTGGTGCAAAGTATAGACTTAAGGGCACATTGAAGAGACATCTGCACTGTAGTCACCCGGAGACACATCCCAACACAAAGTACACATGTGAACATTGTGGGAAAACATTCCTTGCCAAGAGCAATATCATCACTCACATGCGTGTGCATACAGGAGACAAACCGTATCTCTGTCCCTTTTGTCCACAGAGATTTCGCCAGATTTCGTCTCTGATTCGCCACAAAAGGCGGCACACTGGCGAGAGACCCTTCACATGCAGCATCTGTGGCAGATCATTCCTCGATAAAACTTTACTCAACAAACATCACAGTGTGCATAGTGTTGAGAGAAAGTTCAGCTGTCACATCTGCAGCAAGACTTTTAAAACTAAATCTGGCCTGAAGGTTCACACGGATACCCACAGTAAGACCAAGCTTTGGATCTGCAGTTTCTGTGGAATGACGTTCACATTCAAAGGCAATCTTAAAACCCATATTGGCAGGAAACACTCTGAAAAGTCTGGGATGTGCTTGGTCTGCAATAAAGAGTTTGGTGATGTGGAAGCTCACATGAGAGTCCACACTGGGGAGAAGCCATTCACATGTAAGATATGCAATGAGAGTTACGCTTCCGTGAGAAGTTTGTCACATCATATAGGTTTCAAGCACAGAGATGCTGGCAAGTTTAAGTGTGCTTTGGAGGACTGTCCTAAGTCGTTTCCGACAGCTGCCATGCTGGAGTTCCACGTATTGAAGCACCACACGCAGACAACACCATACGTGTGCCCGCATTGCTCGCGCGGGTTTCTACGCCCCTGCGACCTATCGCGTCACCTTAAGCTTAACCATATGGACACGCAGACGCAAGTCAAGTCGCAGTTCCTCAAACCTATCATCAAAGACCTGTAA
- Protein Sequence
- MEFKICRVCLDRTATISVFNKQDDVQYCAKIMKCVSVVIAEGDGFPDAICEGCAGDLAVAYEFATRCEASDKALRCLDLLQTAEPEPETKPQAEPIKREVKPEYDMSFTQNESSEPYDTFLDSESLPAYHCKNEYKNEKPETYTNGCTFGRNKYIKKKIPDYLRTRKLRLKTGPIQCVICDRTLTCHSAFELHMRTHTKERPFSCDICKKTFSNKYSLKKHIQRHFGLTNLCDNNKTTKILDKRRNRPKMGPFQCSTCGRMVSSRSAMENHMRTHSGEKPFACELCGAKYRLKGTLKRHLHCSHPETHPNTKYTCEHCGKTFLAKSNIITHMRVHTGDKPYLCPFCPQRFRQISSLIRHKRRHTGERPFTCSICGRSFLDKTLLNKHHSVHSVERKFSCHICSKTFKTKSGLKVHTDTHSKTKLWICSFCGMTFTFKGNLKTHIGRKHSEKSGMCLVCNKEFGDVEAHMRVHTGEKPFTCKICNESYASVRSLSHHIGFKHRDAGKFKCALEDCPKSFPTAAMLEFHVLKHHTQTTPYVCPHCSRGFLRPCDLSRHLKLNHMDTQTQVKSQFLKPIIKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01208526;
- 90% Identity
- -
- 80% Identity
- -