Aaes031920.1
Basic Information
- Insect
- Alsophila aescularia
- Gene Symbol
- -
- Assembly
- GCA_946251895.1
- Location
- CAMIUG010001909.1:55480-65571[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 24 0.01 1 10.9 0.9 3 23 207 228 206 228 0.90 2 24 1.6 1.5e+02 4.1 0.1 6 23 577 596 577 596 0.90 3 24 0.024 2.3 9.8 0.6 1 22 601 622 601 622 0.95 4 24 1.9 1.8e+02 3.8 0.3 1 23 663 686 663 686 0.90 5 24 0.0014 0.13 13.7 0.9 3 21 697 715 697 716 0.95 6 24 6.2 6.1e+02 2.2 0.5 2 23 724 746 723 746 0.92 7 24 0.022 2.1 9.9 0.5 3 23 767 788 765 788 0.96 8 24 0.0012 0.12 13.8 0.3 1 23 794 817 794 817 0.95 9 24 0.11 10 7.7 0.0 1 23 843 866 843 866 0.90 10 24 0.0047 0.45 12.0 3.5 1 23 871 893 871 893 0.97 11 24 0.012 1.2 10.7 0.8 1 23 899 922 899 922 0.95 12 24 0.0014 0.14 13.6 1.5 1 23 935 957 935 957 0.97 13 24 0.00015 0.015 16.7 1.8 1 23 1006 1029 1006 1029 0.97 14 24 0.0058 0.56 11.7 1.8 1 23 1090 1113 1090 1113 0.96 15 24 0.0017 0.17 13.4 1.5 2 23 1139 1161 1138 1161 0.95 16 24 0.074 7.2 8.2 0.1 2 23 1167 1189 1166 1189 0.93 17 24 0.0084 0.82 11.2 0.2 1 21 1233 1253 1233 1254 0.95 18 24 0.001 0.097 14.1 0.5 1 23 1264 1286 1264 1286 0.93 19 24 9.5e-05 0.0093 17.3 0.3 2 23 1375 1397 1375 1397 0.93 20 24 6.5e-07 6.3e-05 24.2 1.3 3 23 1404 1424 1403 1424 0.98 21 24 0.012 1.2 10.7 0.6 1 23 1443 1465 1443 1466 0.93 22 24 0.18 17 7.0 0.0 1 23 1487 1509 1487 1509 0.98 23 24 0.023 2.3 9.8 0.6 1 23 1515 1538 1515 1538 0.95 24 24 0.00022 0.021 16.2 0.4 1 23 1546 1569 1546 1569 0.96
Sequence Information
- Coding Sequence
- ATGAATGTGAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGTGAATTACTGGCGATTTTTCCTACCACCAGTTCGGATGATACGGATCCTCCCGTCCTCGTCTCGAAAATCAAGGATTGCGTGTCGGTTCAGATAAACGAGGATGACGAACTCCCGACAAACGTCTGCAAGAAATGCATGGACAATGTCAATAACTGGCATAAATTCAAGACTGTGTGTGAAAAGACACAAAACAAACTACATTCTCTTATTAAAAAGGATGGCAGCCTACTAGAAGAGGTGAAAATAAAGAGTGAACCATATTCTGATGAAGTTTATGATGATGGAGTGGTCATTGATGGCTCATATCCAATCATTGAGAATGTCACCTGTTCCAGTAAGATTCAGCCTGAGGGGCCCCCTATCTTGGCTTCCTTGGGACTCACACCGAGGAGTGATAAGGGGGTGGAGAGCGAGAATAATGAAGAGGAGGATTACGAGGAAGAGATGAACGAGCCTCCTCAACCTGTGAAGGTCCCACAGATGCCCGAAGTGTCCATCACCGTGATGCGTCCCACCGGTGAGACCTTACACTCCCGCCAGGGCATCCAGCAACTCGCCTCAAAAGACTGCCTCATCTGCGGCCGGTCGTACAGATACTCCCACAACGCCCGCAGGCACGAGCTAGCATCACACAGCTTCGACCGCTACACCAACAAAGTAACAAATAAAAAATCACACCACTCGCGCATGACGCCCAAACTCAGACCCAATCCTTTCAATCCCAAAGCGCGGCTCATGCCAAACCCCATCAGCCATAAGTTGCAGTTTATGCCCAAAAATATGCCCGCCAAAATAGACCACAGACCACATAAAGTTAACAACCCACCGAAACCGATTCCCATAAAAACTGCTAAAGCGCATAATAACCTGCCGTATCCTCTGCGAATAAAAGCGCTCAAAGACTTGCAGATAAAGAAAAAAGAACCGCAAATTTTAAAGACGTTGCTCACCGCGAAACCCGAGGTGCTAGTGTCCGAACCGGAAATATTAAACTCCGGCCCAGAAAGTCCGGAAACGTTAATATCGGAGCCGGAGATCGCGTCTTTCCAGGTAGAGGCTATCCTCTCGGAGCCTCACGAGTATGATCAAAGTCAAGAAGAAGATGAAATTGAACACAAAAATCAAAATCAAAACTATGATACTGTTGATATGGAATCCGACCATGAGATTGAAATTGCCCGACAGCAAGAACAAGAAGTGCTGGAAAATAATGAAGAAATTGTAGACCAAGATAAAGTGAACCACGTCGATGAGGGCGAGAAACAAGCTGAGAGCGAAAATGAGGGAGACCAGGATACCGGCGACAGCCAGAACATGGAGATTGACGATACCATTGACTCTCACATCATTGAAGGTAAGGTCGGGGACGAGAACGAAGAAGGCGAAAATGATGAAATTGAACAAGACGTCAATCCCGAGGCTGAAGAACATGAAGACGATGCAGATTTGCCGCCGGCTCCCGTGGTTGAACTAAATGAAGACATGCAGCACCATTCTTCTAGCGAGTTGAACGAGGAGGACGAGGAAGTAGATGAACCCCCCGATCTCAACGAAACTGCTGATGTCGAACCGAAAGAGCTCGACCCTGACAAAACATACGTCACTCAGGCTCAAAGGGACTTCATCCTGAAGTACCGCAATGTCATCGAACAAATCAACACAAAAAGATGTATCTGCTGCGACAAAACATACCCGCGTAGGAAAGCGGTCGTTCAGCATTTACAGAAAAATGGACACAAAGTTCCTAAACATACATGTTACAACTGTGTGATCACATTCACACATATTGGCGCTCTACTCAGTCACATGAGATCGAATTCTTGTACGGATCTTTGGAAAATTATCTACGACGACAATGGTATTCCTGACGATATGGTCCTTGAAGATGAGCGTAAGATTAAGGTTCAACCCAAAGACATTTTCAACGCGCGATCCTACGCTTGCAGACTTTGCCCGACCAAATTCCAGTTGAAGCAATCTATAATGAAGCACGTATTAGACGTGCACGAAGACGGCCAGTCGACAGTACCGCTCGGCTGTGTTCATTGCCGAGCCAGCTTCAAAGATAAATCTTTACTCAAAAAACATGTTCGCGTAGGCGAATGCACCGTTTATATCCACTGTGATTTGTGTTCGGATGAATTTTCGAATATGCAAGACTTTACTGACCATGCTTTGTCGGTTCACGCCGACCATTTCGAGAAGTCCGACAATCAAAACAAATGTATCGACGGTCGAGCCACGGACTGTTCGATCTGCGGAAAGAAGAACAGCAATTACTTGAACCTAGTCAAGCATTTGAAAATGGTTCATAACGAAGACAAACCTCATTACTGTCAAAATTGCGACGCTAAATTCGAACAAGCTGCCGAACTTAATAATCACATTTATGTGGAGCATTCCGATCAAGCCTTGGGCTCGCAACCTCTGGAGCCGGACATGACTCTCGTGAAAGAAGAAGCCGAAGAGTACCATTATTCGTGTACAGAATGTAACGCGATATTCGAAACTGTCGATGCCTGGACGGACCACCAAGTGGCGGAACACAACCAAGTCGCCCATCACTGCGACCAGTGCGACAAAAAGTTCTTGCGCCCTTCGGAACTTGCAGAACACAAAAATACCCACTTGAGAGTTAAGTTTTATCCTTGCAGTGTTTGCCCAAATTCATACAGCACACCTCAGAAATTGTCAGACCATGTGCAGCAGTGTCACCCCGGAGCGGGCAACACCGCAGGCGCAGAAACAGAATTCTTCTGCGACATATGCATTCGGTCCTTCAAAAGCCGGCAAGCCTTTTCAAACCACATGCGTATACACGCCAAGGTGCCGACTACTAACAGAAAACCGGGCGAACCTAAAGGATTCGATCCGCGAATTATCGGAAAGCCAATCAAACAATTCACCATGGTCCAACCTGGTTTCGTCAACTTTAAGCCAAACACGAATGTTCCTAACGCGCCTTACTCTTGTGATATATGCGGTAAAGGCTTCATGCATAAGAAAAATATATGGAAACATAAGAAAGTCTTGCACGCTGATATTGTAAATGACAGAAACGACAGCGAAGACAACACCATGCAAGCATCCACGGAAGACGACGATTACAATCCTGATGAAAATGGAGCTCTCTCCACGCCACAGTTCAACAGTTTTAACTTCTCGAATTTTGCTAATAGCAGCACCCCACAGCAAGCTCAGCAAGACAGTATGCCTTTTTCGTGCGAGTTGTGTTTTAAGCGATTCCCGCTTAGAACCAGTTTGTGGAAGCACAAACGTGCTAAACACGGAATCGTGAACTCTGCTCCCAGCGGCTCCAACGAGACTCCAACGCAAGTAACGCCGGGAGAGACCGGCCGATCTAGCTGTACTATTTGTAAAATTACTTTTGCCGACAAGAAATCTTACTACCGACACAGGAAGAATGTTCACAAAACGGCTACGCAAATGTGCAAGATATGCGGGAAGCCGCTCAATTCCACTTTGGAACTGTACGAACATCTCAAAGCCGCTCACGCTCGCGAGTTGTTGGGGTACAACGCCAATCAAGGCTCGAGTAAATCGAAAGAGGTGTCTCAGGATCTGGACGCGGAATATGACAATGAGTCCGAAGCGGTCGATCCCAGCTTGGACTACCAAGCTCGGTACCCGTGCGACACCTGCGGCAAACAGTTCGTGGGACTGCTGGCGTTACAGAACCATCAGTGCATAAATCAGCTTCCTCAGCAACCGCAGACTTTCGACTGCGAAATCTGCCACAAAAGCTACTCGTCTATCGCGGCATTGAAGAGTCATCGCGGTTGGCACTTGCGCTCACCCGACGGCAAAGCGGCTGCCAACAACAGCGGGCTTTGGATGCCTCAGCACAAAGTGACCAGCAAGGTCAGCAAGCACGAGATCGTAGACGCGGTGCAGTTGGCACGCGTCTCGCACTCGGCGCCCGCCGCCGCCGTCACGGCCAAGAGGAGATTGCCGCCGGAGGTCGAAGTGACCGTCGTCAATCCGAACAAAAAGATGCGTTCCGACGACTCTGTAGAAATGGACCAAAGCACGGAAGCTGTAGAAGGGAGGTACTGCACAATCTGCGACAAGGAGTTTACGAAGCGCGCCGCGTACCAGCGTCACATGGACGAGGTCCACCAACCGAACTCTGTGTTTTGTCCAGTCTGCGACAGGAGTTTCACGAGGAAGTCGACGCTGCTGGTGCATATGAAGAAGCATTACGAAGGCGGCGAGGGGAGTACGTCCGCCGCTGCACAAATGGAAGACGAGGGTCACGCTTGTGACGTTTGCGGTGCGCAGTACGACAGCGAGAAGGCTTTGAGAGCTCACCGGGCTAGGCACCACGCGGAAGAGTCAGGCGAGTCGGAGGACGACGGTTGTGCGCCCATAGCGCCTCCTGGCGAGTTTACTTGCGGTCAGTGTGGGGATGGCGTTGCAAGCCCGCGTGATTTGCTCGCCCACAGGTCAATGCATTCGACTCCTACCAAGTTCTTCTGCAATATATGCAAGGTGTACTTCGCACGGGCGCTGGACCTGTCCTCGCACACTCGCGCGCGACACTCGGACAACGAAAAAGTGTTCTTCCCCTGTGCCATGTGTGACCGCTTCTACATGAACAAGAAGAGTTTGCAGCGTCACATTGAAATGGCGCATTGA
- Protein Sequence
- MNVNYDRVCRLCLSSRGELLAIFPTTSSDDTDPPVLVSKIKDCVSVQINEDDELPTNVCKKCMDNVNNWHKFKTVCEKTQNKLHSLIKKDGSLLEEVKIKSEPYSDEVYDDGVVIDGSYPIIENVTCSSKIQPEGPPILASLGLTPRSDKGVESENNEEEDYEEEMNEPPQPVKVPQMPEVSITVMRPTGETLHSRQGIQQLASKDCLICGRSYRYSHNARRHELASHSFDRYTNKVTNKKSHHSRMTPKLRPNPFNPKARLMPNPISHKLQFMPKNMPAKIDHRPHKVNNPPKPIPIKTAKAHNNLPYPLRIKALKDLQIKKKEPQILKTLLTAKPEVLVSEPEILNSGPESPETLISEPEIASFQVEAILSEPHEYDQSQEEDEIEHKNQNQNYDTVDMESDHEIEIARQQEQEVLENNEEIVDQDKVNHVDEGEKQAESENEGDQDTGDSQNMEIDDTIDSHIIEGKVGDENEEGENDEIEQDVNPEAEEHEDDADLPPAPVVELNEDMQHHSSSELNEEDEEVDEPPDLNETADVEPKELDPDKTYVTQAQRDFILKYRNVIEQINTKRCICCDKTYPRRKAVVQHLQKNGHKVPKHTCYNCVITFTHIGALLSHMRSNSCTDLWKIIYDDNGIPDDMVLEDERKIKVQPKDIFNARSYACRLCPTKFQLKQSIMKHVLDVHEDGQSTVPLGCVHCRASFKDKSLLKKHVRVGECTVYIHCDLCSDEFSNMQDFTDHALSVHADHFEKSDNQNKCIDGRATDCSICGKKNSNYLNLVKHLKMVHNEDKPHYCQNCDAKFEQAAELNNHIYVEHSDQALGSQPLEPDMTLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCDKKFLRPSELAEHKNTHLRVKFYPCSVCPNSYSTPQKLSDHVQQCHPGAGNTAGAETEFFCDICIRSFKSRQAFSNHMRIHAKVPTTNRKPGEPKGFDPRIIGKPIKQFTMVQPGFVNFKPNTNVPNAPYSCDICGKGFMHKKNIWKHKKVLHADIVNDRNDSEDNTMQASTEDDDYNPDENGALSTPQFNSFNFSNFANSSTPQQAQQDSMPFSCELCFKRFPLRTSLWKHKRAKHGIVNSAPSGSNETPTQVTPGETGRSSCTICKITFADKKSYYRHRKNVHKTATQMCKICGKPLNSTLELYEHLKAAHARELLGYNANQGSSKSKEVSQDLDAEYDNESEAVDPSLDYQARYPCDTCGKQFVGLLALQNHQCINQLPQQPQTFDCEICHKSYSSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKVSKHEIVDAVQLARVSHSAPAAAVTAKRRLPPEVEVTVVNPNKKMRSDDSVEMDQSTEAVEGRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDRSFTRKSTLLVHMKKHYEGGEGSTSAAAQMEDEGHACDVCGAQYDSEKALRAHRARHHAEESGESEDDGCAPIAPPGEFTCGQCGDGVASPRDLLAHRSMHSTPTKFFCNICKVYFARALDLSSHTRARHSDNEKVFFPCAMCDRFYMNKKSLQRHIEMAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -