Aaes028416.1
Basic Information
- Insect
- Alsophila aescularia
- Gene Symbol
- -
- Assembly
- GCA_946251895.1
- Location
- CAMIUG010001482.1:131402-140379[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 33 0.00013 0.012 17.0 5.1 1 23 10 33 10 33 0.97 2 33 0.0057 0.55 11.7 2.6 1 23 37 60 37 60 0.93 3 33 0.058 5.7 8.6 2.4 2 23 63 85 62 85 0.95 4 33 1.2 1.2e+02 4.4 0.4 3 19 93 109 92 112 0.91 5 33 0.027 2.6 9.6 2.1 1 23 161 184 161 184 0.93 6 33 0.64 62 5.3 0.1 2 23 215 237 214 237 0.92 7 33 0.19 19 6.9 1.4 1 23 258 281 258 281 0.96 8 33 1.9 1.9e+02 3.8 1.0 1 10 286 295 286 309 0.79 9 33 0.0024 0.24 12.9 1.4 1 20 315 334 315 336 0.96 10 33 0.066 6.4 8.4 3.6 1 23 366 388 366 388 0.98 11 33 0.34 33 6.1 0.8 2 23 413 435 412 435 0.89 12 33 0.011 1.1 10.8 1.1 2 23 455 476 454 476 0.96 13 33 0.00067 0.065 14.7 0.0 1 23 481 504 481 504 0.98 14 33 5.2e-05 0.0051 18.1 0.6 1 23 509 532 509 532 0.97 15 33 0.0014 0.13 13.7 0.3 2 23 535 557 535 557 0.94 16 33 0.53 51 5.6 1.0 1 23 636 659 636 659 0.97 17 33 0.024 2.3 9.8 0.0 2 21 734 753 733 756 0.89 18 33 0.012 1.2 10.7 0.5 2 23 762 784 762 784 0.94 19 33 0.0022 0.21 13.0 1.5 2 23 789 811 788 811 0.94 20 33 0.039 3.8 9.1 2.2 1 23 816 839 816 839 0.96 21 33 0.00013 0.012 17.0 5.7 1 23 843 866 843 866 0.97 22 33 0.014 1.4 10.5 3.7 2 23 873 894 872 894 0.96 23 33 9.6 9.3e+02 1.6 0.2 1 8 900 907 900 911 0.85 24 33 4.8 4.6e+02 2.5 0.4 1 23 949 972 949 972 0.93 25 33 0.3 29 6.3 0.0 3 23 1004 1025 1002 1025 0.95 26 33 0.064 6.2 8.4 0.8 2 23 1048 1070 1048 1070 0.95 27 33 0.0022 0.21 13.1 1.2 1 23 1075 1098 1075 1098 0.97 28 33 0.073 7.1 8.2 0.4 1 23 1103 1126 1103 1126 0.92 29 33 0.00064 0.062 14.7 0.8 2 23 1132 1154 1131 1154 0.94 30 33 0.00034 0.033 15.6 0.1 2 23 1162 1184 1161 1184 0.97 31 33 0.018 1.7 10.2 0.1 2 23 1191 1212 1190 1212 0.95 32 33 2.4e-06 0.00023 22.4 0.4 1 23 1218 1240 1218 1240 0.95 33 33 1.8e-05 0.0017 19.6 0.8 2 23 1247 1269 1246 1270 0.93
Sequence Information
- Coding Sequence
- ATGAATAGTAGACACCCGAACAATTGCTTTAGCTGCGATAAATGCGACCAAAAGTTCAACAAAAAGAGGGACTTGCAGTCTCATATGAGGCATCAACACAGAGATGAGTATAGATGCTCAAAATGCATGAAAAACTTCAAATCGAACACAGATCTAGTTCGGCACAAGACGAACGAGCACATCTCGCAATGCAATCTATGTTTTAAAACCTTTTCGTCGTTCAAAATGCGATTGGAACATATGAAGGAACAGCACGATATACTAGGGGGTGGTATTTGCGGATTTTGCAACAAAAAAGTCAACACGAAGCACGCATTTTTGGACCACGCAGCAAAGTGTACAGTTGGAGACATGAAAATTGCAAACGAAATCGTTATAGAGGGCGAGGAAAAACCAAACCCTGTCAAAGTTCTTAGAGAAAAAATAGCCTACATCTTTAACAACACCACAGTTCTACCTTTCAAATACTTCCATAACAGGTTTCGGTGCTTCTACTGCCCTGAAGATTACACCAAATGCCAGGATCTTAGGAATCACACCATTGCGGAACACCCAGTTTGCGATGTGAAGTTGAAATATATGAAGTTGAAGGCGCTGTGCCCTTCCAAAGGAATGAAGCTTAAAGTAGACACGTCTACGTTGCAATGCAAGCTGTGCTTGAAACAATCCATCGATTTAGACTCGCTCGTTTCTCATTTAGAAGCCGAGCACAGAGCGAAGGTAGATAACTGCGTGGAGCAATTTCAACCGTTCAAACTGATCCAAGACAGATTTCCCTGCACTTGGTGTGAGCAAGAGTTCAGACACTTCGGTTTCATACTAAAGCACGTCAATAAAGAACACACCGGAAACCGATACATTTGTGTTTATTGCGGAAAACCTTTTTTAAACGACACTGGCTTGAGGTGCCACGTGGCCCGGTACCATAGACCAAACTACCGCTTCAAATGCTCGAATTGCGACCAAAGATTCTGTGTACAGAGCAAGCTGGACGAGCACATGGATGAAACTGCACAACTGTACGAAAAACGGAGAGAAAACTTGAAAGTACTGTTCAATCACACATCCGTAGTCCCTTTCAAGTGGAAATCAAAATACACCTGCTTCTACTGCAAGGATTCCTTTACCGGATACACCAAGCTTAGGAAGCATACGGAATCTCACAGACCTTACACCAAGAAGACATTAAAAAGTATAGCAACATACCGCGAAATAAAGATAGACGTGTCAAAGATCGTATGTTATTTATGTCACAAGGAGTTCAAAAGCTTTACCGATATCGTTGATCATTTGACGGAATACCACTGCAAATTGTATCATAAGAGTGTCATATCTTTTCAAGAGTACAGGTTGTGCGATCTCAGATGTGTGATTTGTCAAGAAAAGTTTAGCAATTTCAAAATGTTAGCTGTGCATGTCCATTCTCATGCAAAAGGACAGTACGAGTGCGATGATTGTGGTCGACAGTTTAACGAAGCTGCTGACATAGTATTGCATATAAGGTCGCAGCATGTCGCCAACGATTTCGTTTGCTTACAGTGTAGCAAGCGATACGTCGATGCATCTCAGTTAAAGACGCACGTGCGTCGCGTACATTTGCGCCAATGTACAATGTGTGATGCGAAGTTTAAGAATGTGGGTAGTCTGAAACAACACATAGCGCAAGAGCATCGCGATGATGGAGGCACGAAGTGCGGTTTTTGCTTGAAGGAATTCCCTTCTGCAGAAGAAATTAGATTCCATTTGCCCAATTGTGAAGTCAAAGCACTCGCCAAAGGCGCGAACGGTGACAACATCACCCTTCCGAACAAGAGATACAAAAGCACTCTCTGTCACCAAATAAGGCGGAACATTCAATGCGTTCTGAACATGTCTACTGCCGTCCCCTTCAAGTTCAAAGGGAAGTTCTCCTGTTTCTACTGCTCCCATTGGGTTTCCGACTTCGACGAGCTGATTGTACACACCCGGACGGAACACCCTGTTTGCGAGCTGAAATCGAGGGCGATGCAGACCTGTAAAGGCGAGAAAGCTTGTGTCAAGCTGGACATAAACGGCCTTGCTTGCAAAATCTGCCAACAACCGATGCCCGATCTACAAAATTTCGTAGACCATGCCATCGCCGAGCACGGGGCGGACTTCGAAAAGTCCGTCCCGTTTAAAGATTGCTTCGAGACCTTCCATCTCACACAAGGCAGGATTCCTTGTCCCGAATGTCAGGAACCTTTCGCGTACTTCGCCACTTTGCTCAAACATTTAGGCGCGGAGCATAACCACCACAAAGCTGTTTGCGCGTATTGCGGCCGTGGATGTCGTACCACGGCTAGCTTAGCTATGCACATATCCAACTCTCACACAGGCATGTGCGAATGTGCTAATTGCGGTGCCAAATGTAAGAACTCGGCAGCTTTAGCGCGCCACATGGCTCGGTACCACGACGCGAAAGACTTCAAATGCTCCCACTGCCCTGAACAGTTCGAGACCATCTACAAAAAGCAGAACCACTTGATCAAAGCCCACAATATAGGACACAAGTGTGCGCATTGCGGCAAAATGTTTACGAGGAACTCGTTCATGATGAATCACGTGAGACGCACGCATCTGAAGGAGCGGACCGTGCCGTGTTCCGTGTGCCACATGAAGTTCTTCGACAGGTACCACATGAAGCTTCACATGGTGAAGCATGAAGGCATGAGGCGGTTTCGGTGCGAGGATTGCGGTGCTAATACAAAGGAGGACAAATATAAGAAACTGGAATTCGCACGTAAGCTGTTGGTCAAAAGGCGAAATATAGAATACGTCTTACAGTACAGCAACGTCACACCTTTCATGTGGCACAAGTCTAAATACAGGTGCTTTCACTGTGCCGAGCCTATGAAAGACCCAGAAATCTTAAGGCAGCATACTCGAGCTGTTCACTTCAACGCGAACCTCGAACTTCTAGTTTACGATAGAACTAAGAATAATCGAAACAAAGACGCAGCTATTAAAATAGACGTCACTGATATAGCTTGCAAGCTTTGCTCTCAAGCTGCGAACTCTTTAGAAGAGCTGATACACCACATTATCATAGCGCATGATGCCGAATATGACGTCAGCGTTCCCAACTGCCTCCTCCCGTTCAAACTGGACAAAGAGCAGCCAACCTGCGCGACTTGCAACGAGAAGTTTGTCTTCTTCGAGTATCTACTCCGACACGCCAACAAGAACCACCTCTCACACCATTATATTTGCGACGTGTGTGGCGTCAGTTTCCAGGGAGAAAATCACTTGAAAATGCACTACAGGTACTACCATAGAGAAGGGGGGTACACGTGCGAGTACTGCGGGGTCAGTCTGACGACGCTGTCCAAGAAGTTGCTGCACGAAAAGAACGTACATGCAGTGAAGCTGTCCACCTGCCCTCACTGTCCGGAAACCTTTAAAAGTCCGTACTTAAAAAAACTTCACATGGCTAATATACACGGTGTGGAAGAGCTCAAAATCAAATGTCCGTACTGCCCTAAGGTATACCCTCAAGAGAGCATCATGTCTCGACACATGAGACGCGTTCACTTACGAGAAAAGAATGTGGAGTGTGAAGTATGCGGGGACAAATTCTTCGGACCTTACGACTTAAAACTGCACATGGTCAAACACAACGGAGACAAGAAGTTCGTTTGCAACGTGTGCGGGAAGAAATTCGCTAAGAAAAGCAACCTGAACTCTCACGCCATCTTACATACAAGGGAAAAGAGCTTGTCCTGTCTTATTTGCGACAAAGCTTTTGCGAATCAATCGACTTTGAAAGCTCATATAAGCAATAGACATCACCAGTACGAGCACGGTTTTAATATTCTTGAGGATATGGCTGCGAGTAATATGGACGGTGATATGATTGAAATGGAAGTTATACAGGATGGGCTTTCAAGCGCCGAGTCGATGGCCGACCAGTATATTGTAACATAG
- Protein Sequence
- MNSRHPNNCFSCDKCDQKFNKKRDLQSHMRHQHRDEYRCSKCMKNFKSNTDLVRHKTNEHISQCNLCFKTFSSFKMRLEHMKEQHDILGGGICGFCNKKVNTKHAFLDHAAKCTVGDMKIANEIVIEGEEKPNPVKVLREKIAYIFNNTTVLPFKYFHNRFRCFYCPEDYTKCQDLRNHTIAEHPVCDVKLKYMKLKALCPSKGMKLKVDTSTLQCKLCLKQSIDLDSLVSHLEAEHRAKVDNCVEQFQPFKLIQDRFPCTWCEQEFRHFGFILKHVNKEHTGNRYICVYCGKPFLNDTGLRCHVARYHRPNYRFKCSNCDQRFCVQSKLDEHMDETAQLYEKRRENLKVLFNHTSVVPFKWKSKYTCFYCKDSFTGYTKLRKHTESHRPYTKKTLKSIATYREIKIDVSKIVCYLCHKEFKSFTDIVDHLTEYHCKLYHKSVISFQEYRLCDLRCVICQEKFSNFKMLAVHVHSHAKGQYECDDCGRQFNEAADIVLHIRSQHVANDFVCLQCSKRYVDASQLKTHVRRVHLRQCTMCDAKFKNVGSLKQHIAQEHRDDGGTKCGFCLKEFPSAEEIRFHLPNCEVKALAKGANGDNITLPNKRYKSTLCHQIRRNIQCVLNMSTAVPFKFKGKFSCFYCSHWVSDFDELIVHTRTEHPVCELKSRAMQTCKGEKACVKLDINGLACKICQQPMPDLQNFVDHAIAEHGADFEKSVPFKDCFETFHLTQGRIPCPECQEPFAYFATLLKHLGAEHNHHKAVCAYCGRGCRTTASLAMHISNSHTGMCECANCGAKCKNSAALARHMARYHDAKDFKCSHCPEQFETIYKKQNHLIKAHNIGHKCAHCGKMFTRNSFMMNHVRRTHLKERTVPCSVCHMKFFDRYHMKLHMVKHEGMRRFRCEDCGANTKEDKYKKLEFARKLLVKRRNIEYVLQYSNVTPFMWHKSKYRCFHCAEPMKDPEILRQHTRAVHFNANLELLVYDRTKNNRNKDAAIKIDVTDIACKLCSQAANSLEELIHHIIIAHDAEYDVSVPNCLLPFKLDKEQPTCATCNEKFVFFEYLLRHANKNHLSHHYICDVCGVSFQGENHLKMHYRYYHREGGYTCEYCGVSLTTLSKKLLHEKNVHAVKLSTCPHCPETFKSPYLKKLHMANIHGVEELKIKCPYCPKVYPQESIMSRHMRRVHLREKNVECEVCGDKFFGPYDLKLHMVKHNGDKKFVCNVCGKKFAKKSNLNSHAILHTREKSLSCLICDKAFANQSTLKAHISNRHHQYEHGFNILEDMAASNMDGDMIEMEVIQDGLSSAESMADQYIVT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -